FFCP PHASE1:Mm9::chr19:55967419..55967424,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=21416 | |EntrezGene=21416 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=141 | |MCL_coexpression_id=141 | ||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-417bp_to_ENSMUST00000145249_5end | |association_with_transcript=-417bp_to_ENSMUST00000145249_5end | ||
|cluster_id=chr19:55967419..55967424,+ | |||
|description=CAGE_peak_19_at_Tcf7l2_5end | |description=CAGE_peak_19_at_Tcf7l2_5end | ||
|id=chr19:55967419..55967424,+ | |id=chr19:55967419..55967424,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0002613,1.90e-17,3;CL:0002610,3.97e-16,3;CL:0000117,4.52e-14,23;CL:0000337,4.52e-14,23;CL:0000540,1.60e-09,33;CL:0000047,1.60e-09,33;CL:0000031,1.60e-09,33;CL:0000404,1.60e-09,33;CL:0000120,4.62e-08,3;CL:0000393,6.56e-08,39;CL:0000211,6.56e-08,39;CL:0002319,4.40e-07,43;CL:0000221,6.71e-07,44;CL:0000133,6.71e-07,44 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004684,3.97e-16,3;UBERON:0002275,3.97e-16,3;UBERON:0000369,1.10e-10,5;UBERON:0002435,1.10e-10,5;UBERON:0000204,1.10e-10,5;UBERON:0010082,1.10e-10,5;UBERON:0002420,7.62e-07,8;UBERON:0007245,7.62e-07,8;UBERON:0010009,7.62e-07,8;UBERON:0010011,7.62e-07,8;UBERON:0000454,7.62e-07,8;UBERON:0002259,9.48e-07,1;UBERON:0002314,9.48e-07,1;UBERON:0004061,9.48e-07,1;UBERON:0006777,9.48e-07,1;UBERON:0005882,9.48e-07,1 | |||
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| 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| ||
|short_description=p19@Tcf7l2 | |short_description=p19@Tcf7l2 | ||
}} | }} |
Latest revision as of 23:54, 25 September 2015
Short description: | p19@Tcf7l2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_19_at_Tcf7l2_5end |
Coexpression cluster: | MCL_coexpression_mm9:141 |
Association with transcript: | -417bp_to_ENSMUST00000145249_5end |
EntrezGene: | Tcf7l2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
striatum neuron | 1.90e-17 | 3 |
raphe nuclei neuron | 3.97e-16 | 3 |
CNS neuron (sensu Vertebrata) | 4.52e-14 | 23 |
neuroblast (sensu Vertebrata) | 4.52e-14 | 23 |
neuron | 1.60e-09 | 33 |
neuronal stem cell | 1.60e-09 | 33 |
neuroblast | 1.60e-09 | 33 |
electrically signaling cell | 1.60e-09 | 33 |
granule cell | 4.62e-08 | 3 |
electrically responsive cell | 6.56e-08 | 39 |
electrically active cell | 6.56e-08 | 39 |
neural cell | 4.40e-07 | 43 |
ectodermal cell | 6.71e-07 | 44 |
neurectodermal cell | 6.71e-07 | 44 |
Ontology term | p-value | n |
---|---|---|
raphe nuclei | 3.97e-16 | 3 |
reticular formation | 3.97e-16 | 3 |
corpus striatum | 1.10e-10 | 5 |
striatum | 1.10e-10 | 5 |
ventral part of telencephalon | 1.10e-10 | 5 |
future corpus striatum | 1.10e-10 | 5 |
basal ganglion | 7.62e-07 | 8 |
nuclear complex of neuraxis | 7.62e-07 | 8 |
aggregate regional part of brain | 7.62e-07 | 8 |
collection of basal ganglia | 7.62e-07 | 8 |
cerebral subcortex | 7.62e-07 | 8 |
corpora quadrigemina | 9.48e-07 | 1 |
midbrain tectum | 9.48e-07 | 1 |
neural tube mantle layer | 9.48e-07 | 1 |
tectal plate | 9.48e-07 | 1 |
neural tube alar plate | 9.48e-07 | 1 |