Personal tools

FFCP PHASE1:Mm9::chr11:96160098..96160112,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(3 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=15414
|EntrezGene=15414
|HGNC=
|HGNC=
|MCL_coexpression_id=249
|MCL_coexpression_id=249
|TSSclassifier=NA
|UniProt=P09023
|UniProt=P09023
|association_with_transcript=-156bp_to_ENSMUST00000000704_5end
|association_with_transcript=-156bp_to_ENSMUST00000000704_5end
|cluster_id=chr11:96160098..96160112,+
|description=CAGE_peak_8_at_Hoxb6_5end
|description=CAGE_peak_8_at_Hoxb6_5end
|id=chr11:96160098..96160112,+
|id=chr11:96160098..96160112,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=CL:0002612,2.09e-38,3;CL:0002611,5.70e-26,2;CL:0000117,4.90e-14,23;CL:0000337,4.90e-14,23;CL:0000540,7.02e-10,33;CL:0000047,7.02e-10,33;CL:0000031,7.02e-10,33;CL:0000404,7.02e-10,33;CL:0000393,2.12e-08,39;CL:0000211,2.12e-08,39;CL:0002319,1.22e-07,43;CL:0000221,1.80e-07,44;CL:0000133,1.80e-07,44
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000489!7.54e-15!21;UBERON:0002240!1.53e-09!6;UBERON:0005174!1.53e-09!6;UBERON:0001137!1.53e-09!6;UBERON:0001948!7.12e-09!5;UBERON:0002315!7.12e-09!5;UBERON:0002113!1.59e-08!14;UBERON:0003918!1.59e-08!14;UBERON:0005095!1.59e-08!14;UBERON:0007687!1.59e-08!14;UBERON:0002342!3.20e-08!10;UBERON:0005062!3.20e-08!10;UBERON:0006554!3.79e-07!16
|ontology_enrichment_uberon=UBERON:0000489!7.54e-15!21;UBERON:0002240!1.53e-09!6;UBERON:0005174!1.53e-09!6;UBERON:0001137!1.53e-09!6;UBERON:0001948!7.12e-09!5;UBERON:0002315!7.12e-09!5;UBERON:0002113!1.59e-08!14;UBERON:0003918!1.59e-08!14;UBERON:0005095!1.59e-08!14;UBERON:0007687!1.59e-08!14;UBERON:0002342!3.20e-08!10;UBERON:0005062!3.20e-08!10;UBERON:0006554!3.79e-07!16
|ontology_enrichment_uberon_v019_2=UBERON:0001948,8.93e-63,5;UBERON:0002315,8.93e-63,5;UBERON:0002240,1.99e-52,6;UBERON:0005174,1.99e-52,6;UBERON:0001137,1.99e-52,6;UBERON:0002257,2.09e-38,3;UBERON:0000489,3.30e-29,21;UBERON:0003076,1.66e-26,12;UBERON:0003057,1.66e-26,12;UBERON:0002256,5.70e-26,2;UBERON:0003103,2.01e-14,43;UBERON:0000998,2.06e-13,1;UBERON:0007194,2.06e-13,1;UBERON:0006868,2.06e-13,1;UBERON:0000080,3.67e-13,4;UBERON:0005904,3.67e-13,4;UBERON:0006947,3.67e-13,4;UBERON:0002120,3.67e-13,4;UBERON:0004054,3.67e-13,4;UBERON:0004875,3.67e-13,4;UBERON:0004876,3.67e-13,4;UBERON:0005721,3.67e-13,4;UBERON:0005754,3.67e-13,4;UBERON:0007297,3.67e-13,4;UBERON:0002020,1.35e-09,34;UBERON:0000058,6.16e-08,7;UBERON:0010147,2.35e-07,2;UBERON:0003937,2.35e-07,2;UBERON:0005399,2.35e-07,2
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251793635951155,0.912392380975631,0.367093504323363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.85650984403804,2.87129103237098,0,0,0,0,0,0,0,0,0,0,0,0,2.65165726926301,3.84403538157578,5.96478226640962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.29688427812965,0,0.608930956624282,0,0.60289056221049,0.23517741427141,0.376999773989026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.457500602818626,0,0,0,0,0,0,0.622034853050465,1.76905930903572,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154267112887378,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426576501070468,0,0.257734922644187,0,0.22237804384487,0.380451252225118,0,0,0,0,0,0,0.216138049874694,0,0.569003702859245,0.342745537829186,0,0.814605311381257,0.581857461502877,0.350679099451593,0.189709611372772,0,0.156998727841375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37898282354097,0.325929952884052,0,0,0,0,0.195133647857799,0,0,0,0.163863314715738,0,0,0,0,0,0,0,0.937693492737625,0,0,0.315508219416257,0.780877488593277,0.861693590931196,0,0,0,0,0.876767573733936,0,0,0.283880170416537,0.178065603667255,0,0.329940245945071,0,0,0,0,0,0.307435147943927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.21183207086382,0,0.32977250588296,0.161464426695906,0,0.119372344003136,0.164140899745061,0,0.18542530201051,0,0.206386867963223,0,0,0,0,0,0,0,0.954670618015114,0.158167996790568,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.50471631210609,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0.243106717068294,0,0,0,0.206035057238894,0,0.505394423527595,0,0,0.187283014939765,0,0.0574354689556133,0,0.115884325944855,0,0.412085900803307,0,0,0.354951612318675,0.476872379894642,0.145346416632329,0.282328141245992,0.0846146078916765,0,0,0.271608227691724,0,0.118635018124174,0,0,0,0.192906610981141,0,0.233931608445408,0,0.191288332068843,0,0.231867835620421
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251793635951155,0.912392380975631,0.367093504323363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.85650984403804,2.87129103237098,0,0,0,0,0,0,0,0,0,0,0,0,2.65165726926301,3.84403538157578,5.96478226640962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.29688427812965,0,0.608930956624282,0,0.60289056221049,0.23517741427141,0.376999773989026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.457500602818626,0,0,0,0,0,0,0.622034853050465,1.76905930903572,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154267112887378,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426576501070468,0,0.257734922644187,0,0.22237804384487,0.380451252225118,0,0,0,0,0,0,0.216138049874694,0,0.569003702859245,0.342745537829186,0,0.814605311381257,0.581857461502877,0.350679099451593,0.189709611372772,0,0.156998727841375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37898282354097,0.325929952884052,0,0,0,0,0.195133647857799,0,0,0,0.163863314715738,0,0,0,0,0,0,0,0.937693492737625,0,0,0.315508219416257,0.780877488593277,0.861693590931196,0,0,0,0,0.876767573733936,0,0,0.283880170416537,0.178065603667255,0,0.329940245945071,0,0,0,0,0,0.307435147943927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.21183207086382,0,0.32977250588296,0.161464426695906,0,0.119372344003136,0.164140899745061,0,0.18542530201051,0,0.206386867963223,0,0,0,0,0,0,0,0.954670618015114,0.158167996790568,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.50471631210609,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0.243106717068294,0,0,0,0.206035057238894,0,0.505394423527595,0,0,0.187283014939765,0,0.0574354689556133,0,0.115884325944855,0,0.412085900803307,0,0,0.354951612318675,0.476872379894642,0.145346416632329,0.282328141245992,0.0846146078916765,0,0,0.271608227691724,0,0.118635018124174,0,0,0,0.192906610981141,0,0.233931608445408,0,0.191288332068843,0,0.231867835620421
|short_description=p8@Hoxb6
|short_description=p8@Hoxb6
}}
}}

Latest revision as of 01:24, 26 September 2015

Short description:p8@Hoxb6
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_8_at_Hoxb6_5end
Coexpression cluster:MCL_coexpression_mm9:249
Association with transcript: -156bp_to_ENSMUST00000000704_5end
EntrezGene:Hoxb6
Link to Zenbu:ZENBU


View on UCSC genome browser


Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression




0
1
2
3
4
5
6
7




  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data