FFCP PHASE1:Mm9::chr19:59533139..59533152,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=13797 | |EntrezGene=13797 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1174 | |||
|TSSclassifier=NA | |||
|UniProt=G3X9A6,Q04744 | |UniProt=G3X9A6,Q04744 | ||
|association_with_transcript=-27bp_to_ENSMUST00000062216,NM_010132,uc008ibl.1_5end | |association_with_transcript=-27bp_to_ENSMUST00000062216,NM_010132,uc008ibl.1_5end | ||
|cluster_id=chr19:59533139..59533152,+ | |||
|description=CAGE_peak_2_at_Emx2_5end | |description=CAGE_peak_2_at_Emx2_5end | ||
|id=chr19:59533139..59533152,+ | |id=chr19:59533139..59533152,+ | ||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005156!4.08e-09!26;UBERON:0000990!4.08e-09!26;UBERON:0003133!4.38e-09!24;UBERON:0003056!4.39e-09!49;UBERON:0002113!5.77e-09!14;UBERON:0003918!5.77e-09!14;UBERON:0005095!5.77e-09!14;UBERON:0007687!5.77e-09!14;UBERON:0002791!4.26e-08!29;UBERON:0003528!4.26e-08!29;UBERON:0001893!4.26e-08!29;UBERON:0002780!8.53e-08!39;UBERON:0001890!8.53e-08!39;UBERON:0006240!8.53e-08!39;UBERON:0000033!8.53e-08!63;UBERON:0003080!8.72e-08!40;UBERON:0001008!1.75e-07!17;UBERON:0006554!4.03e-07!16;UBERON:0000991!6.33e-07!18;UBERON:0005564!6.33e-07!18 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005156,2.27e-13,26;UBERON:0000990,2.27e-13,26;UBERON:0003133,5.25e-13,24;UBERON:0002113,5.66e-12,14;UBERON:0003918,5.66e-12,14;UBERON:0011143,5.66e-12,14;UBERON:0005095,5.66e-12,14;UBERON:0007687,5.66e-12,14;UBERON:0001008,1.91e-10,19;UBERON:0006554,6.78e-10,18;UBERON:0000991,2.08e-09,18;UBERON:0005564,2.08e-09,18;UBERON:0000474,1.91e-08,9;UBERON:0004176,2.35e-08,17;UBERON:0009196,2.35e-08,17;UBERON:0009117,2.35e-08,17;UBERON:0003134,3.24e-07,8;UBERON:0000489,9.29e-07,21 | |||
|phase1_expression=1.12104192973356,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.87095238332354,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.88845226963366,2.33166941804883,6.05704282133549,0,1.30815093828268,4.17403747195497,3.11087838518853,0.279972843250725,0,0,0,0,0,0,0.515672092277442,3.03474691289397,2.64495489636016,1.26766280701236,0.338844532069132,0,0,0.988866362566974,0,0,0.384218305321555,2.07379224616955,1.4850653216486,1.47227472945967,0,0,0.367472397644862,0.575072826109418,0,0,0.383062014255563,0.46081959976873,1.97829431595291,1.37231465403614,2.08365348222704,0,0.56276261003168,0.15279824777681,0,0,0,0,0,0,0,0,0,0,0,0.421333260395256,0.340860645156116,0.779358013808606,1.41335829804136,1.69012103732017,0,2.54805239706646,0,0,0,0.505524445014783,0.79928715803342,0,0,0.346970653532272,0.304465478312141,0.691846491768175,0,0.470354828542819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149790639404823,1.37250180845588,0.628271760564322,1.21677024134594,0,0.20778804455956,0.811206315338788,4.88828946481518,3.4833951770826,13.8997517138521,0.420883711772948,1.69156575851515,0.229902104433473,0.180062129805349,1.35634336052144,0.272145996605311,0.2562274405697,0.187403449119458,0.517406741478031,1.07783996466421,2.08016688184601,2.81521798662318,2.19195732427575,4.17070873838397,1.74126083261083,0.823128545631774,13.5343301436575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.10289948564127,6.79170441703277,0,0,1.06644125267617,0,0,0,0,0,0,0,0,0,0,0,0,0,9.293727146701,6.05517116831563,13.5249282807697,8.14605311381257,6.20647958936402,3.43665517462561,2.71917109634306,2.36176236767363,1.72698600625512,0.616985819609003,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.551873492609465,0,0,0.327869890753351,0,0,0,0,0,0,0,0,0.292255857911312,0,0.321321316421807,5.67760340833074,16.2039699337202,6.8412522928502,17.9817434040064,0,0,0,0.188605079755898,0,0,0,0,0,0.316036757935816,0,0,0,1.08036656418786,0.776152102696527,0.643011105094777,0.354680467284547,0,0.493647061806363,0,1.64270195644597,0,0,1.48397627647332,0.161464426695906,0.180938774784468,0.119372344003136,0.328281799490123,0,0,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0.406638934253697,0,0,0,0,0,0,0,0,0,9.12050930868271,6.28742263736971,2.33341426012857,2.0665571756437,1.35164900392623,1.5256441023948,1.95306577265925,0.104859344425711,0.241584120826006,0,0,0,0,0,0,0,0,0,0.100966449948148,0,0,0,0,0,0.226730383615211,0,0,0,0,2.43987218086537,14.8352815656485,1.2862102744744,0,2.25900737046827,0.920650473014354,1.14579102687879,0.171853182343688,0.685082519770642,0,0.675022500231806,1.35096360967266,0.906284817968409,0.51776031175182,3.32119512269365,2.39414924040619,0.682934423016537,1.45864030240976,2.30574478890781,2.02227859295016,1.55572709461131,0.618105171716683,0.64183841918363,1.26348605881899,0.760437899670719,1.32038438970253,1.40462261204824,0.640251524048693,1.14870937911227,0,0.463537303779422,1.15745532278223,0.824171801606613,1.03039244094078,1.37147700954166,0.354951612318675,0.476872379894642,0.581385666529314,0.941093804153306,1.26921911837515,0.182927972872773,1.57841826862706,0.950628796921032,1.12228454331548,0.711810108745045,0.689531376628944,1.63692417267876,1.23949472948773,0.964533054905707,0.499621155875892,1.40358965067245,1.71896843238639,0.382576664137687,0.220591419119515,0.231867835620421 | |phase1_expression=1.12104192973356,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.87095238332354,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.88845226963366,2.33166941804883,6.05704282133549,0,1.30815093828268,4.17403747195497,3.11087838518853,0.279972843250725,0,0,0,0,0,0,0.515672092277442,3.03474691289397,2.64495489636016,1.26766280701236,0.338844532069132,0,0,0.988866362566974,0,0,0.384218305321555,2.07379224616955,1.4850653216486,1.47227472945967,0,0,0.367472397644862,0.575072826109418,0,0,0.383062014255563,0.46081959976873,1.97829431595291,1.37231465403614,2.08365348222704,0,0.56276261003168,0.15279824777681,0,0,0,0,0,0,0,0,0,0,0,0.421333260395256,0.340860645156116,0.779358013808606,1.41335829804136,1.69012103732017,0,2.54805239706646,0,0,0,0.505524445014783,0.79928715803342,0,0,0.346970653532272,0.304465478312141,0.691846491768175,0,0.470354828542819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149790639404823,1.37250180845588,0.628271760564322,1.21677024134594,0,0.20778804455956,0.811206315338788,4.88828946481518,3.4833951770826,13.8997517138521,0.420883711772948,1.69156575851515,0.229902104433473,0.180062129805349,1.35634336052144,0.272145996605311,0.2562274405697,0.187403449119458,0.517406741478031,1.07783996466421,2.08016688184601,2.81521798662318,2.19195732427575,4.17070873838397,1.74126083261083,0.823128545631774,13.5343301436575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.10289948564127,6.79170441703277,0,0,1.06644125267617,0,0,0,0,0,0,0,0,0,0,0,0,0,9.293727146701,6.05517116831563,13.5249282807697,8.14605311381257,6.20647958936402,3.43665517462561,2.71917109634306,2.36176236767363,1.72698600625512,0.616985819609003,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.551873492609465,0,0,0.327869890753351,0,0,0,0,0,0,0,0,0.292255857911312,0,0.321321316421807,5.67760340833074,16.2039699337202,6.8412522928502,17.9817434040064,0,0,0,0.188605079755898,0,0,0,0,0,0.316036757935816,0,0,0,1.08036656418786,0.776152102696527,0.643011105094777,0.354680467284547,0,0.493647061806363,0,1.64270195644597,0,0,1.48397627647332,0.161464426695906,0.180938774784468,0.119372344003136,0.328281799490123,0,0,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0.406638934253697,0,0,0,0,0,0,0,0,0,9.12050930868271,6.28742263736971,2.33341426012857,2.0665571756437,1.35164900392623,1.5256441023948,1.95306577265925,0.104859344425711,0.241584120826006,0,0,0,0,0,0,0,0,0,0.100966449948148,0,0,0,0,0,0.226730383615211,0,0,0,0,2.43987218086537,14.8352815656485,1.2862102744744,0,2.25900737046827,0.920650473014354,1.14579102687879,0.171853182343688,0.685082519770642,0,0.675022500231806,1.35096360967266,0.906284817968409,0.51776031175182,3.32119512269365,2.39414924040619,0.682934423016537,1.45864030240976,2.30574478890781,2.02227859295016,1.55572709461131,0.618105171716683,0.64183841918363,1.26348605881899,0.760437899670719,1.32038438970253,1.40462261204824,0.640251524048693,1.14870937911227,0,0.463537303779422,1.15745532278223,0.824171801606613,1.03039244094078,1.37147700954166,0.354951612318675,0.476872379894642,0.581385666529314,0.941093804153306,1.26921911837515,0.182927972872773,1.57841826862706,0.950628796921032,1.12228454331548,0.711810108745045,0.689531376628944,1.63692417267876,1.23949472948773,0.964533054905707,0.499621155875892,1.40358965067245,1.71896843238639,0.382576664137687,0.220591419119515,0.231867835620421 | ||
|short_description=p2@Emx2 | |short_description=p2@Emx2 | ||
}} | }} |
Latest revision as of 02:09, 26 September 2015
Short description: | p2@Emx2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Emx2_5end |
Coexpression cluster: | MCL_coexpression_mm9:1174 |
Association with transcript: | -27bp_to_ENSMUST00000062216, NM_010132, uc008ibl.1_5end |
EntrezGene: | Emx2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
reproductive structure | 2.27e-13 | 26 |
reproductive system | 2.27e-13 | 26 |
reproductive organ | 5.25e-13 | 24 |
kidney | 5.66e-12 | 14 |
kidney mesenchyme | 5.66e-12 | 14 |
upper urinary tract | 5.66e-12 | 14 |
kidney rudiment | 5.66e-12 | 14 |
kidney field | 5.66e-12 | 14 |
renal system | 1.91e-10 | 19 |
urinary system structure | 6.78e-10 | 18 |
gonad | 2.08e-09 | 18 |
gonad primordium | 2.08e-09 | 18 |
female reproductive system | 1.91e-08 | 9 |
external genitalia | 2.35e-08 | 17 |
indifferent external genitalia | 2.35e-08 | 17 |
indifferent gonad | 2.35e-08 | 17 |
female reproductive organ | 3.24e-07 | 8 |
cavitated compound organ | 9.29e-07 | 21 |