FFCP PHASE1:Mm9::chr2:164658381..164658435,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr2:164658381..164658435,+
|short_description=p2@Ctsa
|description=CAGE_peak_2_at_Ctsa_5end
|association_with_transcript=0bp_to_ENSMUST00000103092,ENSMUST00000...") |
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(7 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=19025 | |EntrezGene=19025 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=P16675,A2A5J8,A2A5J7 | |UniProt=P16675,A2A5J8,A2A5J7 | ||
|association_with_transcript=0bp_to_ENSMUST00000103092,ENSMUST00000127650,ENSMUST00000133502,ENSMUST00000147883,ENSMUST00000151493_5end | |||
|cluster_id=chr2:164658381..164658435,+ | |||
|description=CAGE_peak_2_at_Ctsa_5end | |||
|id=chr2:164658381..164658435,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003914!4.96e-15!47;UBERON:0004535!1.31e-12!23;UBERON:0001009!1.31e-12!23;UBERON:0007100!1.98e-11!18;UBERON:0000948!1.98e-11!18;UBERON:0005498!1.98e-11!18;UBERON:0004140!1.98e-11!18;UBERON:0009881!1.98e-11!18;UBERON:0004141!1.98e-11!18;UBERON:0003084!1.98e-11!18;UBERON:0007005!1.98e-11!18;UBERON:0004139!1.98e-11!18;UBERON:0004291!1.98e-11!18;UBERON:0004111!7.60e-11!122;UBERON:0000025!5.30e-10!114;UBERON:0004872!7.01e-09!33;UBERON:0003103!7.78e-07!43 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003914,4.96e-15,47;UBERON:0004535,1.31e-12,23;UBERON:0001009,1.31e-12,23;UBERON:0007100,1.98e-11,18;UBERON:0000948,1.98e-11,18;UBERON:0005498,1.98e-11,18;UBERON:0004140,1.98e-11,18;UBERON:0009881,1.98e-11,18;UBERON:0004141,1.98e-11,18;UBERON:0003084,1.98e-11,18;UBERON:0007005,1.98e-11,18;UBERON:0004139,1.98e-11,18;UBERON:0004291,1.98e-11,18;UBERON:0004111,7.60e-11,122;UBERON:0000025,5.30e-10,114;UBERON:0004872,7.01e-09,33;UBERON:0003104,1.91e-07,61;UBERON:0009142,1.91e-07,61;UBERON:0010314,5.48e-07,92;UBERON:0003103,7.78e-07,43 | |||
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| |phase1_expression=14.733693933641,3.14077866875425,3.63999391511629,5.74682001482977,4.50806156951712,7.38668796412315,9.57811826441655,5.4231795845462,1.68946466582,1.63845168425395,5.13653904676515,4.30769658574817,7.36163138704185,8.74204024189974,5.66286595086627,8.09901069559304,6.99561878128147,11.8298312009339,10.9691546884591,7.63901373236454,11.7359740408476,8.14185799847259,8.61959304158487,8.95957567643077,7.57050627521661,1.72269589234506,3.87685796543167,4.09395342103189,6.65081968097309,3.78045194639896,5.76499327703792,15.8757668364908,10.4561013889377,15.8481681015439,12.9983228888074,10.472782657585,10.8209758819056,1.67412652294763,2.3440060335714,2.09409497589519,0,0.683045484958446,0.485510353031154,26.9419190467735,24.9387250800006,23.6775310288569,50.0730460382745,10.6832326626419,18.8930117151646,16.7209713203884,16.6583841734181,8.62515386189829,12.9192606664457,5.80289713609076,7.39406358113421,22.1243114990914,19.7708073557742,36.6127185516984,5.66486090406874,7.93486468908049,5.07065122804943,22.7025836486319,16.0073063300005,35.995988691256,52.4099172160496,39.7868864369816,29.6604109413221,30.7374644257244,5.18448061542388,7.1553147315796,6.94072372459561,8.85518051651791,10.8225585066291,7.96190194897201,8.05101956553185,4.5960939330501,13.2139057199266,17.4931653176707,15.5142598588806,8.70449499019279,7.22752384459036,8.85552729946492,18.1468949350898,15.757353080887,13.7518422999129,9.42811473515737,7.40332740155335,5.77838282058432,12.6462742866417,12.6204505378332,12.7540375028738,15.487629785665,16.319312008986,23.746940432064,30.5394916200404,28.6737207742295,23.8755514223978,8.18065548374677,7.53379413348319,9.54016851177919,7.04217098883402,3.84979432242953,12.7402619853323,0,3.46385665617943,3.80039798212648,3.53867111510348,13.9304333257253,10.0985774622397,26.274258614474,11.450031566565,17.354532263792,12.4532368518272,15.0722640552623,22.5770317700553,18.598655516792,21.2587672251562,21.5453041810668,13.2691582792481,17.1472860944254,15.0172232553068,12.6067565815158,7.45567044872489,12.296793474485,9.21565509979202,5.8755122697976,6.4700167233197,6.59893004092748,8.89491589511453,18.574039286198,24.2475319493872,14.827213549318,20.5112697826886,19.1786592997748,15.9996794310861,19.4689515681309,18.9421216761588,12.9383249434497,5.05445516867349,14.7309299120532,11.4505989807179,8.5063778640385,12.7844112161798,10.0972227949929,11.5662048557257,11.5302348256365,12.9308379892426,12.6764651662118,4.74249584452253,5.48407632486676,9.32540958068929,13.1517439456545,8.89751197521913,18.1091126591527,15.4336602305958,19.5053581482123,7.72434506044558,6.69104558498259,7.95657798307659,25.0622184767957,35.1789089971644,27.7295574649963,31.487049832833,32.662862470069,28.3851487712776,29.9968788728026,35.6803623861494,23.2363031310667,33.899329082177,33.8184976002936,35.5892073906307,47.3687959258077,43.9100230582101,47.1064529848905,22.9216043934899,11.1136981369627,3.63460661282178,5.55346189993443,15.1434657880016,9.98617688999886,16.3661675879059,24.8070735286711,31.1329261382818,35.1917408308234,6.16887780007865,21.7402620235694,22.6201687920243,25.4664284212673,21.6410136702223,6.29173586057955,7.78096979548899,8.16479220342906,16.6907752838712,10.5108631600951,13.5249282807697,13.0336849821001,22.304536024277,23.1448205638051,21.879841844993,21.6986917530015,22.4508180813166,30.7258938165283,24.3091154211462,11.5123122944105,15.3316016188298,10.793381394473,11.3601667977562,17.1235783424216,17.3145579211365,19.5633373466551,20.9154442539796,15.9245619649087,12.9391385874619,24.9334434937897,23.7148631567066,26.5207821844467,25.6538301336334,46.3145780508832,7.57488079683079,13.2643988239339,10.5927234687317,10.0149600607361,9.85699042811709,15.7455881995307,8.80761471278251,6.63454402716516,11.0344600874334,13.0664166892777,11.6401981119966,10.1595255123758,10.5337838938196,9.83613598354279,28.6503439484617,10.8781136763742,5.90117127622843,16.8321415245887,13.6468001489623,20.3948334670434,13.6066004662641,50.2417145136702,15.4599027513966,12.8844785617891,17.6647186140895,17.4447222505363,17.8238939265915,15.5692091933858,14.5731852602962,12.8592577480977,14.2303600060748,19.2792789853084,23.9878744001974,21.3678724400706,15.6371480979433,27.2200702904683,10.619611067197,15.5379607139188,11.7906187216253,10.1846743068185,11.5167738223501,10.4527950300935,12.9214146584111,11.9966130727577,15.329387270543,12.9575070753685,12.6502330289999,17.5330423521918,13.6175842301515,10.0834212657534,13.5826617971892,12.8602221018955,16.3153014950892,11.5939731441346,12.9993726275676,14.9187825066154,11.7335854031855,16.0992373856503,22.2733682035512,15.6641940294406,15.339120536111,11.0372652618525,13.7278195603607,13.459553779095,10.7847909553045,16.6882771809459,12.815316059839,11.9704383418669,12.9636169158798,8.66494902221579,8.47504211870356,9.37990510146743,9.34881364966204,9.6566502103324,9.95039811391851,11.4560474161814,13.6024477239888,12.1991680276109,12.5286195353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| ||
|short_description=p2@Ctsa | |||
}} | }} |
Latest revision as of 03:34, 26 September 2015
Short description: | p2@Ctsa |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Ctsa_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENSMUST00000103092, ENSMUST00000127650, ENSMUST00000133502, ENSMUST00000147883, ENSMUST00000151493_5end |
EntrezGene: | Ctsa |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial tube | 4.96e-15 | 47 |
cardiovascular system | 1.31e-12 | 23 |
circulatory system | 1.31e-12 | 23 |
primary circulatory organ | 1.98e-11 | 18 |
heart | 1.98e-11 | 18 |
primitive heart tube | 1.98e-11 | 18 |
primary heart field | 1.98e-11 | 18 |
anterior lateral plate mesoderm | 1.98e-11 | 18 |
heart tube | 1.98e-11 | 18 |
heart primordium | 1.98e-11 | 18 |
cardiac mesoderm | 1.98e-11 | 18 |
cardiogenic plate | 1.98e-11 | 18 |
heart rudiment | 1.98e-11 | 18 |
anatomical conduit | 7.60e-11 | 122 |
tube | 5.30e-10 | 114 |
splanchnic layer of lateral plate mesoderm | 7.01e-09 | 33 |
mesenchyme | 1.91e-07 | 61 |
entire embryonic mesenchyme | 1.91e-07 | 61 |
structure with developmental contribution from neural crest | 5.48e-07 | 92 |
compound organ | 7.78e-07 | 43 |