FFCP PHASE1:Mm9::chr14:56380245..56380273,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=57260 | |EntrezGene=57260 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=109 | |||
|TSSclassifier=NA | |||
|UniProt=Q9JJL9 | |UniProt=Q9JJL9 | ||
|association_with_transcript=0bp_to_NM_020490,uc007uaq.1_5end | |association_with_transcript=0bp_to_NM_020490,uc007uaq.1_5end | ||
|cluster_id=chr14:56380245..56380273,+ | |||
|description=CAGE_peak_1_at_Ltb4r2_5end | |description=CAGE_peak_1_at_Ltb4r2_5end | ||
|id=chr14:56380245..56380273,+ | |id=chr14:56380245..56380273,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0000349,9.94e-13,3;CL:0000351,9.94e-13,3;CL:0000708,7.45e-10,2;CL:0000151,7.77e-07,3;CL:0000499,7.77e-07,3;CL:0000327,7.77e-07,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000014!1.34e-07!5;UBERON:0001003!1.34e-07!5;UBERON:0002097!1.34e-07!5;UBERON:0002199!1.34e-07!5;UBERON:0007029!1.34e-07!5;UBERON:0007376!1.34e-07!5;UBERON:0002416!1.34e-07!5;UBERON:0007383!1.34e-07!5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000014,3.16e-22,5;UBERON:0001003,3.16e-22,5;UBERON:0002097,3.16e-22,5;UBERON:0002199,3.16e-22,5;UBERON:0007029,3.16e-22,5;UBERON:0007376,3.16e-22,5;UBERON:0002416,3.16e-22,5;UBERON:0007383,3.16e-22,5;UBERON:0000358,9.94e-13,3;UBERON:0000307,9.94e-13,3;UBERON:0007010,9.94e-13,3;UBERON:0003102,7.05e-12,22;UBERON:0003210,7.45e-10,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0,0,0,0.219686182734472,0.194429899074283,0,0,0,0,0,0,0,0,0,0,0,4.06613438482959,1.77858959222228,0,0,0,0.898800331555214,0.768436610643109,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142371680799103,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0.865964164044856,0.506719730950197,0,0.11418387971906,0,0,0.173485326766136,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.27450482590307,0.420883711772948,0,0,0,0.30140963567143,0,0,0.0937017245597288,0,0,0,0,0,0.278047249225598,0.348252166522167,1.02891068203972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164698954724011,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.390438744296638,0.215423397732799,0.238968797952552,0.222798674082394,0,0.404810701674894,0.876767573733936,0.395287777946524,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220528398054962,3.79238381765404,3.55221738730992,2.41251699712623,2.98430860007841,2.29797259643086,0,0,0,0,0,0,0,0,0,0,0,0.954670618015114,0,0.203319467126849,0.540026704109006,0.836353184057875,1.74690050996942,1.61837215661785,1.1571483801547,3.40282724579238,0,0,0,0,0,0,0,0,0,0,0,0,0,1.58005560314089,0.608175645870493,0.821687657318618,0.25984164595559,0.179026695667481,0.198681354781265,0.240390899039938,0.443068581523732,0.302899349844443,0.457240839929999,0,0.194915761479505,0.192423683280659,0.116876902181569,6.57518112484113,1.33191572024439,1.52513556236109,1.17519231454855,0,0,0,18.8644173589578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206035057238894,0,0,0.25347929989024,0.188626341386076,0.280924522409647,0.0640251524048693,0.114870937911227,1.42888107384922,0,0.38581844092741,0.412085900803307,0.147198920134397,0.342869252385415,0.354951612318675,0,0.436039249896986,0.188218760830661,0.25384382367503,0.365855945745545,0.263069711437843,0.271608227691724,0,0.355905054372522,0.0985044823755635,0.409231043169689,0,0.964533054905707,0.749431733813838,1.16965804222704,0.214871054048298,0.382576664137687,0,0.231867835620421 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0,0,0,0.219686182734472,0.194429899074283,0,0,0,0,0,0,0,0,0,0,0,4.06613438482959,1.77858959222228,0,0,0,0.898800331555214,0.768436610643109,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142371680799103,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0.865964164044856,0.506719730950197,0,0.11418387971906,0,0,0.173485326766136,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.27450482590307,0.420883711772948,0,0,0,0.30140963567143,0,0,0.0937017245597288,0,0,0,0,0,0.278047249225598,0.348252166522167,1.02891068203972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164698954724011,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.390438744296638,0.215423397732799,0.238968797952552,0.222798674082394,0,0.404810701674894,0.876767573733936,0.395287777946524,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220528398054962,3.79238381765404,3.55221738730992,2.41251699712623,2.98430860007841,2.29797259643086,0,0,0,0,0,0,0,0,0,0,0,0.954670618015114,0,0.203319467126849,0.540026704109006,0.836353184057875,1.74690050996942,1.61837215661785,1.1571483801547,3.40282724579238,0,0,0,0,0,0,0,0,0,0,0,0,0,1.58005560314089,0.608175645870493,0.821687657318618,0.25984164595559,0.179026695667481,0.198681354781265,0.240390899039938,0.443068581523732,0.302899349844443,0.457240839929999,0,0.194915761479505,0.192423683280659,0.116876902181569,6.57518112484113,1.33191572024439,1.52513556236109,1.17519231454855,0,0,0,18.8644173589578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206035057238894,0,0,0.25347929989024,0.188626341386076,0.280924522409647,0.0640251524048693,0.114870937911227,1.42888107384922,0,0.38581844092741,0.412085900803307,0.147198920134397,0.342869252385415,0.354951612318675,0,0.436039249896986,0.188218760830661,0.25384382367503,0.365855945745545,0.263069711437843,0.271608227691724,0,0.355905054372522,0.0985044823755635,0.409231043169689,0,0.964533054905707,0.749431733813838,1.16965804222704,0.214871054048298,0.382576664137687,0,0.231867835620421 | ||
|short_description=p1@Ltb4r2 | |short_description=p1@Ltb4r2 | ||
}} | }} |
Latest revision as of 03:59, 26 September 2015
Short description: | p1@Ltb4r2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Ltb4r2_5end |
Coexpression cluster: | MCL_coexpression_mm9:109 |
Association with transcript: | 0bp_to_NM_020490, uc007uaq.1_5end |
EntrezGene: | Ltb4r2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 9.94e-13 | 3 |
trophoblast cell | 9.94e-13 | 3 |
leptomeningeal cell | 7.45e-10 | 2 |
secretory cell | 7.77e-07 | 3 |
stromal cell | 7.77e-07 | 3 |
extracellular matrix secreting cell | 7.77e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
zone of skin | 3.16e-22 | 5 |
skin epidermis | 3.16e-22 | 5 |
skin of body | 3.16e-22 | 5 |
integument | 3.16e-22 | 5 |
surface | 3.16e-22 | 5 |
outer epithelium | 3.16e-22 | 5 |
integumental system | 3.16e-22 | 5 |
enveloping layer of ectoderm | 3.16e-22 | 5 |
blastocyst | 9.94e-13 | 3 |
blastula | 9.94e-13 | 3 |
cleaving embryo | 9.94e-13 | 3 |
surface structure | 7.05e-12 | 22 |
blood-cerebrospinal fluid barrier | 7.45e-10 | 2 |