FFCP PHASE1:Mm9::chr7:149657663..149657682,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr7:149657663..149657682,+
|short_description=p12@Lsp1
|description=CAGE_peak_12_at_Lsp1_5end
|association_with_transcript=-65bp_to_ENSMUST00000038946,NM_01939...") |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=16985 | |EntrezGene=16985 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=2463 | |||
|TSSclassifier=NA | |||
|UniProt=P19973,A2A6J4 | |UniProt=P19973,A2A6J4 | ||
|association_with_transcript=-65bp_to_ENSMUST00000038946,NM_019391,uc009kne.1,uc009knf.1,uc009kng.1_5end | |||
|cluster_id=chr7:149657663..149657682,+ | |||
|description=CAGE_peak_12_at_Lsp1_5end | |||
|id=chr7:149657663..149657682,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000991!4.30e-07!18;UBERON:0005564!4.30e-07!18;UBERON:0004176!9.99e-07!17;UBERON:0009196!9.99e-07!17;UBERON:0009117!9.99e-07!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004176,7.59e-16,17;UBERON:0009196,7.59e-16,17;UBERON:0009117,7.59e-16,17;UBERON:0000991,6.61e-15,18;UBERON:0005564,6.61e-15,18;UBERON:0000945,3.47e-12,16;UBERON:0010039,3.47e-12,16;UBERON:0000473,4.01e-11,14;UBERON:0003133,6.61e-11,24;UBERON:0003135,2.40e-10,15;UBERON:0005156,5.55e-10,26;UBERON:0000990,5.55e-10,26;UBERON:0003101,1.15e-09,16;UBERON:0000079,1.15e-09,16;UBERON:0002323,1.98e-08,37;UBERON:0004458,1.98e-08,37;UBERON:0003886,3.58e-08,38;UBERON:0002553,6.29e-08,39;UBERON:0000992,8.29e-07,3 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251793635951155,0,0.183546752161682,0,0,0,0.194429899074283,0.139986421625363,0,0,0,0,0,0.286533439938757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285650984403804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142371680799103,0,0,0,0,0,0,0,0,0,0,0,0.259786004602869,0,0.14084341977668,0,0,0,0,0,0,0.11418387971906,0.258937883647172,0,0.693941307064543,0,0,0,0.117588707135705,0.125666591329675,0,0.144599356919912,0,0.161766849947409,0.662524555381181,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.46253837091075,0.124406970610093,0,0,0.520481771850815,0.229902104433473,0.360124259610698,0.60281927134286,0.204109497453984,0.2562274405697,0,0,0,0.189106080167819,0.351902248327898,0.219195732427575,0.834141747676794,0,0.823128545631774,0.398068533636986,0,0,0,0.414251545071004,0.469052119962192,0.540186184383045,0.23674473558521,0.196764231747404,1.07986979021165,0.232533944750408,0,0.233530684734339,0,0.164167464079095,0.56748166682099,0.292399974850665,0.439100230582101,0.671032093801859,0,0,0,0,0.853153002140936,1.39342003116263,0.902072229254653,0.403367049246685,0,0.380451252225118,0,0.164698954724011,0.754005626400808,0.596869416123452,0.974820435595601,0,0.216138049874694,0.199141273254367,0.189667900953082,0.114248512609729,0,0.610953983535943,0.387904974335251,0.561086559122548,0.632365371242573,0,0,0,0,0.166845105716094,0.393117990226406,0.224862112384854,0.405720242777006,0.241177159752417,0,0.287696137450811,0,0,0,0,0,0,0,0,0,0.37898282354097,0.977789858652155,0.678980343100753,1.64283173801951,0.335012514883631,0.238043640886014,0.585400943573396,0.788175720530955,1.10732344824387,0.318909537314974,0,0.172684981865896,0,0,0,0,0,0,0.117211686592203,1.3114795630134,0.504941854408746,0,0,0,0,0,0,0,0,0,0,0.283880170416537,3.02711526234334,1.46598263418218,0.989820737835213,0,0,0.604647113929502,0.943025398779491,0.295301892880773,0,0,0,0,0.632073515871632,0,0,0,0.18006109403131,0,0,0.354680467284547,0.178368817602071,0.329098041204242,0.304464949114599,0,0,0,0,0,0.120625849856312,0,0,0,0,0,0.82554747185289,1.48155621895769,0.188368457004691,0,0,0,0,0,0,0.790839983952838,1.62655573701479,2.05210147561422,2.09088296014469,1.09181281873089,1.07891477107857,1.1571483801547,0,0.129614973291793,0,0,0.448549638131936,1.82004339502807,1.55560950675238,2.71235629303235,1.85851738039856,2.46450201156083,0.781226309063701,0.314578033277133,0.241584120826006,0,0,0.202725215290164,0,0,0,0,0.120195449519969,0.147689527174577,0.100966449948148,0.15241361331,0,0,0,0,0,0,0,0,0.579568782096571,0.187682475451182,0.73260649706906,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0.415149390336707,0,0,0,0,0.919217542250071,0.44449345560323,0.206035057238894,0,0.252697211763798,0.50695859978048,0.188626341386076,0.468207537349412,0.384150914429216,0.287177344778066,0.476293691283074,0,0.38581844092741,0.824171801606613,0.588795680537589,0.685738504770831,0.177475806159338,0,0.145346416632329,0.188218760830661,0.0846146078916765,0.182927972872773,1.05227884575137,0.135804113845862,0,0.355905054372522,0.197008964751127,0.818462086339379,0.309873682371932,0,0.499621155875892,0.467863216890817,0,0.382576664137687,0.441182838239031,0.463735671240843 | |phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251793635951155,0,0.183546752161682,0,0,0,0.194429899074283,0.139986421625363,0,0,0,0,0,0.286533439938757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285650984403804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142371680799103,0,0,0,0,0,0,0,0,0,0,0,0.259786004602869,0,0.14084341977668,0,0,0,0,0,0,0.11418387971906,0.258937883647172,0,0.693941307064543,0,0,0,0.117588707135705,0.125666591329675,0,0.144599356919912,0,0.161766849947409,0.662524555381181,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.46253837091075,0.124406970610093,0,0,0.520481771850815,0.229902104433473,0.360124259610698,0.60281927134286,0.204109497453984,0.2562274405697,0,0,0,0.189106080167819,0.351902248327898,0.219195732427575,0.834141747676794,0,0.823128545631774,0.398068533636986,0,0,0,0.414251545071004,0.469052119962192,0.540186184383045,0.23674473558521,0.196764231747404,1.07986979021165,0.232533944750408,0,0.233530684734339,0,0.164167464079095,0.56748166682099,0.292399974850665,0.439100230582101,0.671032093801859,0,0,0,0,0.853153002140936,1.39342003116263,0.902072229254653,0.403367049246685,0,0.380451252225118,0,0.164698954724011,0.754005626400808,0.596869416123452,0.974820435595601,0,0.216138049874694,0.199141273254367,0.189667900953082,0.114248512609729,0,0.610953983535943,0.387904974335251,0.561086559122548,0.632365371242573,0,0,0,0,0.166845105716094,0.393117990226406,0.224862112384854,0.405720242777006,0.241177159752417,0,0.287696137450811,0,0,0,0,0,0,0,0,0,0.37898282354097,0.977789858652155,0.678980343100753,1.64283173801951,0.335012514883631,0.238043640886014,0.585400943573396,0.788175720530955,1.10732344824387,0.318909537314974,0,0.172684981865896,0,0,0,0,0,0,0.117211686592203,1.3114795630134,0.504941854408746,0,0,0,0,0,0,0,0,0,0,0.283880170416537,3.02711526234334,1.46598263418218,0.989820737835213,0,0,0.604647113929502,0.943025398779491,0.295301892880773,0,0,0,0,0.632073515871632,0,0,0,0.18006109403131,0,0,0.354680467284547,0.178368817602071,0.329098041204242,0.304464949114599,0,0,0,0,0,0.120625849856312,0,0,0,0,0,0.82554747185289,1.48155621895769,0.188368457004691,0,0,0,0,0,0,0.790839983952838,1.62655573701479,2.05210147561422,2.09088296014469,1.09181281873089,1.07891477107857,1.1571483801547,0,0.129614973291793,0,0,0.448549638131936,1.82004339502807,1.55560950675238,2.71235629303235,1.85851738039856,2.46450201156083,0.781226309063701,0.314578033277133,0.241584120826006,0,0,0.202725215290164,0,0,0,0,0.120195449519969,0.147689527174577,0.100966449948148,0.15241361331,0,0,0,0,0,0,0,0,0.579568782096571,0.187682475451182,0.73260649706906,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0.415149390336707,0,0,0,0,0.919217542250071,0.44449345560323,0.206035057238894,0,0.252697211763798,0.50695859978048,0.188626341386076,0.468207537349412,0.384150914429216,0.287177344778066,0.476293691283074,0,0.38581844092741,0.824171801606613,0.588795680537589,0.685738504770831,0.177475806159338,0,0.145346416632329,0.188218760830661,0.0846146078916765,0.182927972872773,1.05227884575137,0.135804113845862,0,0.355905054372522,0.197008964751127,0.818462086339379,0.309873682371932,0,0.499621155875892,0.467863216890817,0,0.382576664137687,0.441182838239031,0.463735671240843 | ||
|short_description=p12@Lsp1 | |||
}} | }} |
Latest revision as of 05:14, 26 September 2015
Short description: | p12@Lsp1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_12_at_Lsp1_5end |
Coexpression cluster: | MCL_coexpression_mm9:2463 |
Association with transcript: | -65bp_to_ENSMUST00000038946, NM_019391, uc009kne.1, uc009knf.1, uc009kng.1_5end |
EntrezGene: | Lsp1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
external genitalia | 7.59e-16 | 17 |
indifferent external genitalia | 7.59e-16 | 17 |
indifferent gonad | 7.59e-16 | 17 |
gonad | 6.61e-15 | 18 |
gonad primordium | 6.61e-15 | 18 |
stomach | 3.47e-12 | 16 |
food storage organ | 3.47e-12 | 16 |
testis | 4.01e-11 | 14 |
reproductive organ | 6.61e-11 | 24 |
male reproductive organ | 2.40e-10 | 15 |
reproductive structure | 5.55e-10 | 26 |
reproductive system | 5.55e-10 | 26 |
male organism | 1.15e-09 | 16 |
male reproductive system | 1.15e-09 | 16 |
body cavity | 1.98e-08 | 37 |
body cavity or lining | 1.98e-08 | 37 |
body cavity precursor | 3.58e-08 | 38 |
anatomical cavity | 6.29e-08 | 39 |
female gonad | 8.29e-07 | 3 |