FFCP PHASE1:Mm9::chr2:168592591..168592604,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=99377 | |EntrezGene=99377 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=834 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=12bp_to_ENSMUST00000130640_5end | |association_with_transcript=12bp_to_ENSMUST00000130640_5end | ||
|cluster_id=chr2:168592591..168592604,- | |||
|description=CAGE_peak_2_at_Sall4_5end | |description=CAGE_peak_2_at_Sall4_5end | ||
|id=chr2:168592591..168592604,- | |id=chr2:168592591..168592604,- | ||
|ontology_enrichment_celltype=CL:0000349!9.22e-07!3;CL:0000351!9.22e-07!3 | |ontology_enrichment_celltype=CL:0000349!9.22e-07!3;CL:0000351!9.22e-07!3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000349,1.66e-44,3;CL:0000351,1.66e-44,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000473!5.21e-11!14;UBERON:0003135!4.15e-10!15;UBERON:0000991!1.43e-09!18;UBERON:0005564!1.43e-09!18;UBERON:0003101!2.53e-09!16;UBERON:0000079!2.53e-09!16;UBERON:0004176!1.25e-08!17;UBERON:0009196!1.25e-08!17;UBERON:0009117!1.25e-08!17;UBERON:0003133!5.83e-08!24;UBERON:0005156!4.02e-07!26;UBERON:0000990!4.02e-07!26;UBERON:0000358!9.22e-07!3;UBERON:0000307!9.22e-07!3 | |ontology_enrichment_uberon=UBERON:0000473!5.21e-11!14;UBERON:0003135!4.15e-10!15;UBERON:0000991!1.43e-09!18;UBERON:0005564!1.43e-09!18;UBERON:0003101!2.53e-09!16;UBERON:0000079!2.53e-09!16;UBERON:0004176!1.25e-08!17;UBERON:0009196!1.25e-08!17;UBERON:0009117!1.25e-08!17;UBERON:0003133!5.83e-08!24;UBERON:0005156!4.02e-07!26;UBERON:0000990!4.02e-07!26;UBERON:0000358!9.22e-07!3;UBERON:0000307!9.22e-07!3 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000358,1.66e-44,3;UBERON:0000307,1.66e-44,3;UBERON:0007010,1.66e-44,3;UBERON:0000473,5.43e-10,14;UBERON:0003135,2.25e-09,15;UBERON:0003101,7.85e-09,16;UBERON:0000079,7.85e-09,16;UBERON:0004176,2.36e-08,17;UBERON:0009196,2.36e-08,17;UBERON:0009117,2.36e-08,17;UBERON:0000991,6.30e-08,18;UBERON:0005564,6.30e-08,18 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606949382578793,0,0.633831403506179,0,0,0,0,0,0,0,0,0.135005938331691,0,0,0,0.122490799214954,0,0,0,0,0,0.131886287730194,0.182975287204819,0,0,0,0.15279824777681,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173485326766136,0,0,0.150722640552623,0.117588707135705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.520481771850815,0.459804208866946,0,0,0,0,0,0,0.431135985865684,0,0,0,0,0,0,0.199034266818493,0,0,0,0.207125772535502,0.234526059981096,0,0,0,0,0,0,0,0.16455984991348,0,0,0,0,0,0,0,0,0,0.639864751605702,0.464473343720877,0.38660238396628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.500535317148282,0.589676985339609,0.449724224769707,0.202860121388503,0.72353147925725,0.50925170356284,0.575392274901621,0.486405680325106,0,0,0,0,0,0,0,0,0.568474235311454,0,0,0,0,0.238043640886014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0.129358683782755,0,0,0,0,0,0.704015124191131,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316335993581135,0,0,0.209088296014469,0,0,0,0,0,0,0,1.04661582230785,0.66183396182839,0.388902376688095,0.774958940866387,0.337912250981556,0.352071715937262,2.0832701575032,2.51662426621706,0.724752362478018,0.288030006257865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.44184548711471,3.3194126945506,4.7007692581942,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.518936737920883,0.399024873401031,0,0.243106717068294,0.209613162627982,0,0,0,0,0.252697211763798,0,0,0,0,0.17230640686684,0,0,0,0.412085900803307,0,0,0,0,0,0,0,0,0,0,0,0.118635018124174,0,0,0,0.192906610981141,0,0.233931608445408,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606949382578793,0,0.633831403506179,0,0,0,0,0,0,0,0,0.135005938331691,0,0,0,0.122490799214954,0,0,0,0,0,0.131886287730194,0.182975287204819,0,0,0,0.15279824777681,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173485326766136,0,0,0.150722640552623,0.117588707135705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.520481771850815,0.459804208866946,0,0,0,0,0,0,0.431135985865684,0,0,0,0,0,0,0.199034266818493,0,0,0,0.207125772535502,0.234526059981096,0,0,0,0,0,0,0,0.16455984991348,0,0,0,0,0,0,0,0,0,0.639864751605702,0.464473343720877,0.38660238396628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.500535317148282,0.589676985339609,0.449724224769707,0.202860121388503,0.72353147925725,0.50925170356284,0.575392274901621,0.486405680325106,0,0,0,0,0,0,0,0,0.568474235311454,0,0,0,0,0.238043640886014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0.129358683782755,0,0,0,0,0,0.704015124191131,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316335993581135,0,0,0.209088296014469,0,0,0,0,0,0,0,1.04661582230785,0.66183396182839,0.388902376688095,0.774958940866387,0.337912250981556,0.352071715937262,2.0832701575032,2.51662426621706,0.724752362478018,0.288030006257865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.44184548711471,3.3194126945506,4.7007692581942,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.518936737920883,0.399024873401031,0,0.243106717068294,0.209613162627982,0,0,0,0,0.252697211763798,0,0,0,0,0.17230640686684,0,0,0,0.412085900803307,0,0,0,0,0,0,0,0,0,0,0,0.118635018124174,0,0,0,0.192906610981141,0,0.233931608445408,0,0,0,0 | ||
|short_description=p2@Sall4 | |short_description=p2@Sall4 | ||
}} | }} |
Latest revision as of 05:32, 26 September 2015
Short description: | p2@Sall4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Sall4_5end |
Coexpression cluster: | MCL_coexpression_mm9:834 |
Association with transcript: | 12bp_to_ENSMUST00000130640_5end |
EntrezGene: | Sall4 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 1.66e-44 | 3 |
trophoblast cell | 1.66e-44 | 3 |
Ontology term | p-value | n |
---|---|---|
blastocyst | 1.66e-44 | 3 |
blastula | 1.66e-44 | 3 |
cleaving embryo | 1.66e-44 | 3 |
testis | 5.43e-10 | 14 |
male reproductive organ | 2.25e-09 | 15 |
male organism | 7.85e-09 | 16 |
male reproductive system | 7.85e-09 | 16 |
external genitalia | 2.36e-08 | 17 |
indifferent external genitalia | 2.36e-08 | 17 |
indifferent gonad | 2.36e-08 | 17 |
gonad | 6.30e-08 | 18 |
gonad primordium | 6.30e-08 | 18 |