FFCP PHASE1:Mm9::chr9:113840108..113840184,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr9:113840108..113840184,+
|short_description=p2@Ubp1
|description=CAGE_peak_2_at_Ubp1_5end
|association_with_transcript=56bp_to_ENSMUST00000009885,ENSMUST0000...") |
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(7 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=22221 | |EntrezGene=22221 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=Q811S7 | |UniProt=Q811S7 | ||
|association_with_transcript=56bp_to_ENSMUST00000009885,ENSMUST00000084885,NM_001083319,NM_013699,uc009rwx.1,uc009rwy.1_5end | |||
|cluster_id=chr9:113840108..113840184,+ | |||
|description=CAGE_peak_2_at_Ubp1_5end | |||
|id=chr9:113840108..113840184,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000153!2.98e-13!94;UBERON:0007811!1.22e-10!86;UBERON:0003056!2.94e-10!49;UBERON:0000033!2.95e-09!63;UBERON:0003080!7.97e-08!40;UBERON:0000955!1.58e-07!50;UBERON:0006238!1.58e-07!50;UBERON:0002780!2.37e-07!39;UBERON:0001890!2.37e-07!39;UBERON:0006240!2.37e-07!39;UBERON:0002616!4.93e-07!49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003056,2.94e-10,49;UBERON:0000955,1.91e-08,47;UBERON:0006238,1.91e-08,47;UBERON:0002616,6.48e-08,46;UBERON:0003080,7.96e-08,40;UBERON:0002780,2.37e-07,39;UBERON:0001890,2.37e-07,39;UBERON:0006240,2.37e-07,39;UBERON:0002346,2.95e-07,64;UBERON:0003075,2.95e-07,64;UBERON:0007284,2.95e-07,64;UBERON:0010371,7.34e-07,73 | |||
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| ||
|short_description=p2@Ubp1 | |||
}} | }} |
Latest revision as of 06:52, 26 September 2015
Short description: | p2@Ubp1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Ubp1_5end |
Coexpression cluster: | NA |
Association with transcript: | 56bp_to_ENSMUST00000009885, ENSMUST00000084885, NM_001083319, NM_013699, uc009rwx.1, uc009rwy.1_5end |
EntrezGene: | Ubp1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pre-chordal neural plate | 2.94e-10 | 49 |
brain | 1.91e-08 | 47 |
future brain | 1.91e-08 | 47 |
regional part of brain | 6.48e-08 | 46 |
anterior neural tube | 7.96e-08 | 40 |
regional part of forebrain | 2.37e-07 | 39 |
forebrain | 2.37e-07 | 39 |
future forebrain | 2.37e-07 | 39 |
neurectoderm | 2.95e-07 | 64 |
neural plate | 2.95e-07 | 64 |
presumptive neural plate | 2.95e-07 | 64 |
ecto-epithelium | 7.34e-07 | 73 |