FFCP PHASE1:Mm9::chr5:89105160..89105211,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=231413 | |EntrezGene=231413 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=2081 | |MCL_coexpression_id=2081 | ||
|TSSclassifier=NA | |||
|UniProt=Q8C5Q4 | |UniProt=Q8C5Q4 | ||
|association_with_transcript=0bp_to_ENSMUST00000078945,NM_178700,uc008yac.1_5end | |association_with_transcript=0bp_to_ENSMUST00000078945,NM_178700,uc008yac.1_5end | ||
|cluster_id=chr5:89105160..89105211,- | |||
|description=CAGE_peak_1_at_Grsf1_5end | |description=CAGE_peak_1_at_Grsf1_5end | ||
|id=chr5:89105160..89105211,- | |id=chr5:89105160..89105211,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003914!3.03e-12!47;UBERON:0005177!5.61e-11!85;UBERON:0000466!1.03e-09!79;UBERON:0001048!1.04e-09!147;UBERON:0009569!1.46e-09!66;UBERON:0000468!2.17e-09!333;UBERON:0005172!3.58e-09!49;UBERON:0005173!3.58e-09!49;UBERON:0002417!3.58e-09!49;UBERON:0000916!3.58e-09!49;UBERON:0002100!6.52e-09!98;UBERON:0003103!1.50e-08!43;UBERON:0000926!2.26e-08!193;UBERON:0004120!2.26e-08!193;UBERON:0006603!2.26e-08!193;UBERON:0002365!1.53e-07!25;UBERON:0002330!1.53e-07!25;UBERON:0007100!2.77e-07!18;UBERON:0000948!2.77e-07!18;UBERON:0005498!2.77e-07!18;UBERON:0004140!2.77e-07!18;UBERON:0009881!2.77e-07!18;UBERON:0004141!2.77e-07!18;UBERON:0003084!2.77e-07!18;UBERON:0007005!2.77e-07!18;UBERON:0004139!2.77e-07!18;UBERON:0004291!2.77e-07!18;UBERON:0002107!5.99e-07!22;UBERON:0007499!5.99e-07!22;UBERON:0006925!5.99e-07!22;UBERON:0009497!5.99e-07!22;UBERON:0000015!5.99e-07!22;UBERON:0002423!5.99e-07!22;UBERON:0006235!5.99e-07!22;UBERON:0008835!5.99e-07!22;UBERON:0003894!5.99e-07!22;UBERON:0004161!5.99e-07!22;UBERON:0008836!5.99e-07!22;UBERON:0003104!9.97e-07!131;UBERON:0009142!9.97e-07!131 | |ontology_enrichment_uberon=UBERON:0003914!3.03e-12!47;UBERON:0005177!5.61e-11!85;UBERON:0000466!1.03e-09!79;UBERON:0001048!1.04e-09!147;UBERON:0009569!1.46e-09!66;UBERON:0000468!2.17e-09!333;UBERON:0005172!3.58e-09!49;UBERON:0005173!3.58e-09!49;UBERON:0002417!3.58e-09!49;UBERON:0000916!3.58e-09!49;UBERON:0002100!6.52e-09!98;UBERON:0003103!1.50e-08!43;UBERON:0000926!2.26e-08!193;UBERON:0004120!2.26e-08!193;UBERON:0006603!2.26e-08!193;UBERON:0002365!1.53e-07!25;UBERON:0002330!1.53e-07!25;UBERON:0007100!2.77e-07!18;UBERON:0000948!2.77e-07!18;UBERON:0005498!2.77e-07!18;UBERON:0004140!2.77e-07!18;UBERON:0009881!2.77e-07!18;UBERON:0004141!2.77e-07!18;UBERON:0003084!2.77e-07!18;UBERON:0007005!2.77e-07!18;UBERON:0004139!2.77e-07!18;UBERON:0004291!2.77e-07!18;UBERON:0002107!5.99e-07!22;UBERON:0007499!5.99e-07!22;UBERON:0006925!5.99e-07!22;UBERON:0009497!5.99e-07!22;UBERON:0000015!5.99e-07!22;UBERON:0002423!5.99e-07!22;UBERON:0006235!5.99e-07!22;UBERON:0008835!5.99e-07!22;UBERON:0003894!5.99e-07!22;UBERON:0004161!5.99e-07!22;UBERON:0008836!5.99e-07!22;UBERON:0003104!9.97e-07!131;UBERON:0009142!9.97e-07!131 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0005177,4.39e-13,79;UBERON:0003914,3.03e-12,47;UBERON:0002100,2.17e-10,90;UBERON:0009569,1.46e-09,66;UBERON:0005172,3.58e-09,49;UBERON:0005173,3.58e-09,49;UBERON:0002417,3.58e-09,49;UBERON:0000916,3.58e-09,49;UBERON:0003103,1.50e-08,43;UBERON:0003104,2.52e-08,61;UBERON:0009142,2.52e-08,61;UBERON:0002365,1.53e-07,25;UBERON:0002330,1.53e-07,25;UBERON:0007100,2.77e-07,18;UBERON:0000948,2.77e-07,18;UBERON:0005498,2.77e-07,18;UBERON:0004140,2.77e-07,18;UBERON:0009881,2.77e-07,18;UBERON:0004141,2.77e-07,18;UBERON:0003084,2.77e-07,18;UBERON:0007005,2.77e-07,18;UBERON:0004139,2.77e-07,18;UBERON:0004291,2.77e-07,18;UBERON:0001048,5.44e-07,134;UBERON:0002107,5.99e-07,22;UBERON:0007499,5.99e-07,22;UBERON:0006925,5.99e-07,22;UBERON:0009497,5.99e-07,22;UBERON:0000015,5.99e-07,22;UBERON:0002423,5.99e-07,22;UBERON:0006235,5.99e-07,22;UBERON:0008835,5.99e-07,22;UBERON:0003894,5.99e-07,22;UBERON:0004161,5.99e-07,22;UBERON:0008836,5.99e-07,22 | |||
|phase1_expression=32.1899182680636,16.0528687514106,21.8399634906977,17.5429242557961,27.0483694171027,27.5322005935499,26.8654536684855,20.9179783975354,17.4578015468067,15.6823232635736,19.0051944730311,25.4473187195123,24.1393029203,19.5821701418554,31.645427372488,18.627724599864,27.2829132469977,18.1390745080987,15.9052742982657,20.7950929381035,28.064285749853,38.0284343099391,27.1647780704493,20.4790301175561,21.564472420314,19.5238867799107,20.2458138194765,23.9173068281337,22.4227634958521,25.9591033652729,25.2772782147047,13.3356441426523,24.6025915033828,0,33.7956395108991,44.7171196014344,36.1379760584393,24.6933662134776,28.1280724028568,20.4174260149781,19.9998705930545,23.2235464885872,19.9059244742773,30.2152363141385,25.1414789424396,19.6395024812999,10.1710874765245,16.5699118849139,21.5292459079782,30.7199240537368,22.8177867249341,25.8754615856949,16.9460432118314,21.7608642603403,20.8378155468328,22.8960898071993,35.2436131124671,31.9716697212014,24.0756588422921,29.0945038599618,27.8885817542719,16.2645375393183,19.5644855144451,20.2477436388315,12.8552627133707,17.7620028736525,20.0732074047331,28.432154593795,23.6412316063329,22.5459917013923,25.6596452848686,23.1377297367081,21.8659855542097,20.3334726696824,21.086003624012,21.1420320920305,34.1359231098105,38.5615761017267,36.8655679814984,20.1786020227197,21.7740591773735,26.5665818983948,33.2227768811643,25.3243174514256,28.8788688298171,29.4628585473668,25.3421591822403,27.9599168737951,23.1722151599543,27.7347625591903,22.0297011413275,34.4169550792555,84.9964167134688,82.0348851289482,82.521605015854,114.694883096918,53.9306573305927,17.3838929029619,12.9893002301434,14.4869225549239,38.0277233397037,17.9657068380045,30.5766287647975,21.3320010945999,47.6280290224671,40.2842186105407,36.9032844860792,54.4657106259916,17.3488382043605,41.5637989381509,27.5841669558156,36.5358573974569,36.4372485664572,33.6111488432348,48.6817247541818,53.1569681324527,28.1802263217186,71.1428836045965,23.8844849026466,46.265319084959,48.1434510243658,46.0631490478461,20.5030937339934,33.6697916563279,30.7886659015779,26.3120766864849,28.8754450059268,16.7972764678154,26.9388881394897,31.9054061932272,17.3850229071078,25.00521607046,28.3333641913411,29.1515621356577,28.6747501492193,34.2329065072969,36.6621709861139,42.5471839486518,36.1393544560155,101.643416393167,28.2361361229067,28.5078609497506,28.2697543794398,31.0451924741573,40.4136804958887,32.412771232067,45.4453364114685,61.0539954944077,31.9040629540606,29.6896545863476,27.62432649374,31.3449897371432,28.0827721717854,31.6909471535172,25.9285491874009,34.6319624264178,21.066395619397,14.6688307055388,32.6788024304931,45.1534184127394,40.5730083767296,39.4335914599623,38.3526471648041,49.191057936851,48.131339220862,53.017739403093,67.3366237513044,74.6130537726213,70.7607354627966,68.6219999850618,106.524415743254,97.9539915749726,98.1389015350996,106.559896495735,32.5949420274397,28.8132914661996,27.0943402046714,32.7918702662795,29.4337785738623,26.9394539358109,31.9591304078791,30.6558957427481,25.795853086005,27.3924901602085,30.8443890003933,36.0690710845584,31.9195715176342,30.4403402222961,28.6597208065107,37.7504151634773,25.7204279350886,34.4514402730055,31.1055357563054,33.5890627072603,33.8123207019241,35.63898237293,41.8937372282072,52.6720007376292,58.6202699141865,58.3060084519429,70.3354300729359,82.7994969915281,71.74153575509,36.2053879403924,35.3806191203765,27.8829019357219,36.1091016071535,35.2118653238529,34.3744899904917,37.4004978686054,71.1773645542405,40.9096505650241,74.7594673942244,48.3783231969054,61.1593839304539,59.1034574396242,77.3202852279442,82.9802856744992,30.6690295676564,30.6976087068185,28.5188708773545,36.6649385274406,32.1525640155248,30.4861388544105,41.6576371550524,39.2218632194176,39.8816914588663,32.3338446887211,35.5584134106196,28.6760800752541,26.7661721892138,37.030158996867,33.1740824666399,35.8977751320348,39.8329061145419,34.2161565417868,36.284433337241,39.3831266949803,43.934565360949,89.374708230348,29.3422644057119,26.1593958678748,34.8985904327134,34.4115069051675,32.9742037641943,40.479943902803,28.3367491172426,32.1481443702443,28.0654322342032,29.5615611108062,29.3815976381116,35.4350551297838,41.6990615945155,32.334144102617,45.1333470355874,37.3882179678671,37.7904446205939,38.0982261106914,36.0268309314543,38.7368286409349,43.9328098385976,40.3522439720031,42.4231880277818,47.4055136903724,69.5762816594992,69.1008139762852,36.4270378156553,27.9094695748531,26.3891714916819,32.3648922897704,25.1823131772028,33.3549688915872,31.4288629350051,39.8849083340125,29.0992917999001,39.8244293223982,41.2388104362779,36.2749756471256,40.5275711006723,35.1021223081867,28.7687349047559,33.8130253474826,33.8117770490627,33.3765543618917,23.5801815501037,38.5943443091226,32.4090422896995,26.5599524376614,26.2452917224368,26.5382680919566,24.1369370591275,21.8324265624906,23.0793956253388,41.0508365746499,31.0009273709513,25.414933390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| ||
|short_description=p1@Grsf1 | |short_description=p1@Grsf1 | ||
}} | }} |
Latest revision as of 07:33, 26 September 2015
Short description: | p1@Grsf1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Grsf1_5end |
Coexpression cluster: | MCL_coexpression_mm9:2081 |
Association with transcript: | 0bp_to_ENSMUST00000078945, NM_178700, uc008yac.1_5end |
EntrezGene: | Grsf1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
trunk region element | 4.39e-13 | 79 |
epithelial tube | 3.03e-12 | 47 |
trunk | 2.17e-10 | 90 |
subdivision of trunk | 1.46e-09 | 66 |
abdomen element | 3.58e-09 | 49 |
abdominal segment element | 3.58e-09 | 49 |
abdominal segment of trunk | 3.58e-09 | 49 |
abdomen | 3.58e-09 | 49 |
compound organ | 1.50e-08 | 43 |
mesenchyme | 2.52e-08 | 61 |
entire embryonic mesenchyme | 2.52e-08 | 61 |
exocrine gland | 1.53e-07 | 25 |
exocrine system | 1.53e-07 | 25 |
primary circulatory organ | 2.77e-07 | 18 |
heart | 2.77e-07 | 18 |
primitive heart tube | 2.77e-07 | 18 |
primary heart field | 2.77e-07 | 18 |
anterior lateral plate mesoderm | 2.77e-07 | 18 |
heart tube | 2.77e-07 | 18 |
heart primordium | 2.77e-07 | 18 |
cardiac mesoderm | 2.77e-07 | 18 |
cardiogenic plate | 2.77e-07 | 18 |
heart rudiment | 2.77e-07 | 18 |
primordium | 5.44e-07 | 134 |
liver | 5.99e-07 | 22 |
epithelial sac | 5.99e-07 | 22 |
digestive gland | 5.99e-07 | 22 |
epithelium of foregut-midgut junction | 5.99e-07 | 22 |
anatomical boundary | 5.99e-07 | 22 |
hepatobiliary system | 5.99e-07 | 22 |
foregut-midgut junction | 5.99e-07 | 22 |
hepatic diverticulum | 5.99e-07 | 22 |
liver primordium | 5.99e-07 | 22 |
septum transversum | 5.99e-07 | 22 |
liver bud | 5.99e-07 | 22 |