FFCP PHASE1:Mm9::chr9:121276138..121276160,+: Difference between revisions
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{{FFCP|EntrezGene=67095|HGNC=|MCL_coexpression_id=71|UniProt=Q6PD31,Q80VE1|association_with_transcript=62bp_to_ENSMUST00000045903,NM_175114,uc009sde.1,uc009sdf.1_5end|description=CAGE_peak_3_at_Trak1_5end|id=chr9:121276138..121276160,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000153!1.72e-10!94;UBERON:0007811!1.17e-09!86|ontology_enrichment_uberon_v019_2=UBERON:0006562,3.68e-10,24;UBERON:0001557,3.68e-10,24;UBERON:0001042,3.68e-10,24;UBERON:0008814,3.68e-10,24;UBERON:0009145,3.68e-10,24;UBERON:0002370,3.28e-09,23;UBERON:0000974,3.28e-09,23;UBERON:0004807,3.28e-09,23;UBERON:0005058,3.28e-09,23;UBERON:0003351,3.28e-09,23;UBERON:0009113,3.28e-09,23;UBERON:0003295,3.28e-09,23;UBERON:0009722,3.28e-09,23;UBERON:0005562,3.28e-09,23;UBERON:0007690,3.28e-09,23;UBERON:0003408,1.28e-08,24;UBERON:0000072,1.98e-08,27;UBERON:0000014,3.00e-07,5;UBERON:0001003,3.00e-07,5;UBERON:0002097,3.00e-07,5;UBERON:0002199,3.00e-07,5;UBERON:0007029,3.00e-07,5;UBERON:0007376,3.00e-07,5;UBERON:0002416,3.00e-07,5;UBERON:0007383,3.00e-07,5;UBERON:0000153,9.00e-07,43|phase1_expression=0.960893082628764,0,0,0,0,0.16787927191189,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0,0,0,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0.166234645358492,0,0.418531630736908,0,0,0,0,0,0,0,0,0,0,0.219686182734472,0,0.419959264876088,0,0,0,0,0,0,0,1.01158230429799,2.64495489636016,0.633831403506179,0,0,0,0,0,0,1.15265491596466,0.414758449233911,0.405017814995072,0.210324961351382,0,0,0.122490799214954,0.479227355091182,0,2.20231761998777,1.91531007127782,1.22885226604995,1.71452174049252,1.28082701043374,1.04182674111352,0.279182999001381,1.12552522006336,1.83357897332172,0.589257170947335,0.569486723196412,0,0,0,0.289864488701678,0,0,0,0,0,0.280888840263504,0,0,0,3.38024207464033,8.98285341900225,2.54805239706646,0,0,0,0.505524445014783,0.22836775943812,0.258937883647172,0.445326417194474,0,0,0,0,0,0.502666365318702,0,4.04878199375753,0,0.808834249737046,1.10420759230197,0.484875253135222,0,2.34224637609238,1.04723353406728,0,0,0,0,1.49790639404823,0.457500602818626,0,1.39059456153821,0.511430914660661,0.41557608911912,1.29793010454206,0,0.373220911830279,0,0.420883711772948,0,0,0,0.452114453507145,0.136072998302656,0.384341160854549,0.281105173679186,0.517406741478031,0,0,0,0.876782929710299,5.00485048606076,12.537077994798,16.2567887762275,0,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0.16455984991348,0.164167464079095,0.162137619091711,0,0.439100230582101,0.268412837520744,1.26173969138476,0.102904612379284,0,0,0,0,0,0.201683524623343,0.22237804384487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0632365371242573,0,0,0.123397163921801,1.1858105083486,0,0,0.224862112384854,0,0,0,0,0,0.549122826376163,0,0.372140947668503,0,0,0,0,0,0,0,0,0,0.335012514883631,0,0,0.157635144106191,0,0.159454768657487,0,0.518054945597687,0.433947175744535,0,0,0.983528546038072,1.10374698521893,1.28440471990234,0.820481806145422,0,3.02965112645248,0,0,0,0,0,0,0,0,0,1.28528526568723,0.425820255624806,0,0,0,0,0,0,0,0.295301892880773,0,0,0.363533729477506,0,0,0,0,0.340439605753788,0,0.129358683782755,0,0.177340233642274,0.178368817602071,0.164549020602121,0,0,0,0,12.5313552235525,9.68786560175433,8.50412241486998,6.08798954415996,6.56563598980245,0,1.11255181206306,0,0,0,0,0,0,0,0,0,0.954670618015114,0,0,0.324016022465404,0.418176592028937,0.436725127492355,1.07891477107857,1.23980183588004,1.83229159388821,0,0,1.12738587736838,0,0.165458490457098,0,0,0.168956125490778,0.469428954583016,1.5624526181274,1.99232754408851,1.20792060413003,0.576060012515731,3.47612232690996,2.63542779877213,3.28675062927447,5.97635785697857,5.37080087002444,3.57626438606277,2.40390899039938,3.10148007066612,2.52416124870369,2.43861781295999,1.61321896218945,1.94915761479505,1.6356013078856,1.5193997283604,9.52267611183888,0,0,0,0.19318959403219,0.187682475451182,0,1.71494703263253,0,1.6942555278512,1.84130094602871,0.572895513439397,0.343706364687375,0,0,0.675022500231806,1.35096360967266,0.906284817968409,1.55328093525546,0,0,0.341467211508268,2.43106717068294,0.628839487883947,0.919217542250071,2.00022055021454,1.85431551515005,2.24643446714271,1.76888048234658,1.77435509923168,1.13175804831646,1.40462261204824,0.768301828858431,2.1825478203133,2.85776214769844,1.50649623728312,1.92909220463705,1.64834360321323,1.76638704161277,1.02860775715625,2.30718548007139,2.38436189947321,2.61623549938191,1.41164070622996,1.01537529470012,2.0122077016005,1.05227884575137,1.49384525230448,3.92799590160417,1.77952527186261,1.77308068276014,1.63692417267876,0.77468420592983,4.82266527452853,2.74791635731741,3.74290573512653,1.93383948643468,0.956441660344217,1.76473135295612,2.78241402744506|short_description=p3@Trak1}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=67095 | |||
|HGNC= | |||
|MCL_coexpression_id=71 | |||
|TSSclassifier=NA | |||
|UniProt=Q6PD31,Q80VE1 | |||
|association_with_transcript=62bp_to_ENSMUST00000045903,NM_175114,uc009sde.1,uc009sdf.1_5end | |||
|cluster_id=chr9:121276138..121276160,+ | |||
|description=CAGE_peak_3_at_Trak1_5end | |||
|id=chr9:121276138..121276160,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000153!1.72e-10!94;UBERON:0007811!1.17e-09!86 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006562,3.68e-10,24;UBERON:0001557,3.68e-10,24;UBERON:0001042,3.68e-10,24;UBERON:0008814,3.68e-10,24;UBERON:0009145,3.68e-10,24;UBERON:0002370,3.28e-09,23;UBERON:0000974,3.28e-09,23;UBERON:0004807,3.28e-09,23;UBERON:0005058,3.28e-09,23;UBERON:0003351,3.28e-09,23;UBERON:0009113,3.28e-09,23;UBERON:0003295,3.28e-09,23;UBERON:0009722,3.28e-09,23;UBERON:0005562,3.28e-09,23;UBERON:0007690,3.28e-09,23;UBERON:0003408,1.28e-08,24;UBERON:0000072,1.98e-08,27;UBERON:0000014,3.00e-07,5;UBERON:0001003,3.00e-07,5;UBERON:0002097,3.00e-07,5;UBERON:0002199,3.00e-07,5;UBERON:0007029,3.00e-07,5;UBERON:0007376,3.00e-07,5;UBERON:0002416,3.00e-07,5;UBERON:0007383,3.00e-07,5;UBERON:0000153,9.00e-07,43 | |||
|phase1_expression=0.960893082628764,0,0,0,0,0.16787927191189,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0,0,0,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0.166234645358492,0,0.418531630736908,0,0,0,0,0,0,0,0,0,0,0.219686182734472,0,0.419959264876088,0,0,0,0,0,0,0,1.01158230429799,2.64495489636016,0.633831403506179,0,0,0,0,0,0,1.15265491596466,0.414758449233911,0.405017814995072,0.210324961351382,0,0,0.122490799214954,0.479227355091182,0,2.20231761998777,1.91531007127782,1.22885226604995,1.71452174049252,1.28082701043374,1.04182674111352,0.279182999001381,1.12552522006336,1.83357897332172,0.589257170947335,0.569486723196412,0,0,0,0.289864488701678,0,0,0,0,0,0.280888840263504,0,0,0,3.38024207464033,8.98285341900225,2.54805239706646,0,0,0,0.505524445014783,0.22836775943812,0.258937883647172,0.445326417194474,0,0,0,0,0,0.502666365318702,0,4.04878199375753,0,0.808834249737046,1.10420759230197,0.484875253135222,0,2.34224637609238,1.04723353406728,0,0,0,0,1.49790639404823,0.457500602818626,0,1.39059456153821,0.511430914660661,0.41557608911912,1.29793010454206,0,0.373220911830279,0,0.420883711772948,0,0,0,0.452114453507145,0.136072998302656,0.384341160854549,0.281105173679186,0.517406741478031,0,0,0,0.876782929710299,5.00485048606076,12.537077994798,16.2567887762275,0,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0.16455984991348,0.164167464079095,0.162137619091711,0,0.439100230582101,0.268412837520744,1.26173969138476,0.102904612379284,0,0,0,0,0,0.201683524623343,0.22237804384487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0632365371242573,0,0,0.123397163921801,1.1858105083486,0,0,0.224862112384854,0,0,0,0,0,0.549122826376163,0,0.372140947668503,0,0,0,0,0,0,0,0,0,0.335012514883631,0,0,0.157635144106191,0,0.159454768657487,0,0.518054945597687,0.433947175744535,0,0,0.983528546038072,1.10374698521893,1.28440471990234,0.820481806145422,0,3.02965112645248,0,0,0,0,0,0,0,0,0,1.28528526568723,0.425820255624806,0,0,0,0,0,0,0,0.295301892880773,0,0,0.363533729477506,0,0,0,0,0.340439605753788,0,0.129358683782755,0,0.177340233642274,0.178368817602071,0.164549020602121,0,0,0,0,12.5313552235525,9.68786560175433,8.50412241486998,6.08798954415996,6.56563598980245,0,1.11255181206306,0,0,0,0,0,0,0,0,0,0.954670618015114,0,0,0.324016022465404,0.418176592028937,0.436725127492355,1.07891477107857,1.23980183588004,1.83229159388821,0,0,1.12738587736838,0,0.165458490457098,0,0,0.168956125490778,0.469428954583016,1.5624526181274,1.99232754408851,1.20792060413003,0.576060012515731,3.47612232690996,2.63542779877213,3.28675062927447,5.97635785697857,5.37080087002444,3.57626438606277,2.40390899039938,3.10148007066612,2.52416124870369,2.43861781295999,1.61321896218945,1.94915761479505,1.6356013078856,1.5193997283604,9.52267611183888,0,0,0,0.19318959403219,0.187682475451182,0,1.71494703263253,0,1.6942555278512,1.84130094602871,0.572895513439397,0.343706364687375,0,0,0.675022500231806,1.35096360967266,0.906284817968409,1.55328093525546,0,0,0.341467211508268,2.43106717068294,0.628839487883947,0.919217542250071,2.00022055021454,1.85431551515005,2.24643446714271,1.76888048234658,1.77435509923168,1.13175804831646,1.40462261204824,0.768301828858431,2.1825478203133,2.85776214769844,1.50649623728312,1.92909220463705,1.64834360321323,1.76638704161277,1.02860775715625,2.30718548007139,2.38436189947321,2.61623549938191,1.41164070622996,1.01537529470012,2.0122077016005,1.05227884575137,1.49384525230448,3.92799590160417,1.77952527186261,1.77308068276014,1.63692417267876,0.77468420592983,4.82266527452853,2.74791635731741,3.74290573512653,1.93383948643468,0.956441660344217,1.76473135295612,2.78241402744506 | |||
|short_description=p3@Trak1 | |||
}} |
Latest revision as of 08:20, 26 September 2015
Short description: | p3@Trak1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Trak1_5end |
Coexpression cluster: | MCL_coexpression_mm9:71 |
Association with transcript: | 62bp_to_ENSMUST00000045903, NM_175114, uc009sde.1, uc009sdf.1_5end |
EntrezGene: | Trak1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pharynx | 3.68e-10 | 24 |
upper respiratory tract | 3.68e-10 | 24 |
chordate pharynx | 3.68e-10 | 24 |
pharyngeal arch system | 3.68e-10 | 24 |
pharyngeal region of foregut | 3.68e-10 | 24 |
thymus | 3.28e-09 | 23 |
neck | 3.28e-09 | 23 |
respiratory system epithelium | 3.28e-09 | 23 |
hemolymphoid system gland | 3.28e-09 | 23 |
pharyngeal epithelium | 3.28e-09 | 23 |
thymic region | 3.28e-09 | 23 |
pharyngeal gland | 3.28e-09 | 23 |
entire pharyngeal arch endoderm | 3.28e-09 | 23 |
thymus primordium | 3.28e-09 | 23 |
early pharyngeal endoderm | 3.28e-09 | 23 |
gland of gut | 1.28e-08 | 24 |
segment of respiratory tract | 1.98e-08 | 27 |
zone of skin | 3.00e-07 | 5 |
skin epidermis | 3.00e-07 | 5 |
skin of body | 3.00e-07 | 5 |
integument | 3.00e-07 | 5 |
surface | 3.00e-07 | 5 |
outer epithelium | 3.00e-07 | 5 |
integumental system | 3.00e-07 | 5 |
enveloping layer of ectoderm | 3.00e-07 | 5 |
anterior region of body | 9.00e-07 | 43 |