FFCP PHASE1:Mm9::chr2:19579682..19579699,+: Difference between revisions
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{{FFCP|EntrezGene=71198|HGNC=|MCL_coexpression_id=99|UniProt=Q9CUB6|association_with_transcript=0bp_to_ENSMUST00000052168,NM_027715,uc008imj.2_5end|description=CAGE_peak_2_at_Otud1_5end|id=chr2:19579682..19579699,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002453,3.77e-07,8;CL:0000333,7.47e-07,10;CL:0000095,7.47e-07,10;CL:0000243,7.47e-07,10;CL:0000123,7.47e-07,10;CL:0000125,7.47e-07,10;CL:0000030,7.47e-07,10;CL:0000339,7.47e-07,10|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004535!5.66e-09!23;UBERON:0001009!5.66e-09!23;UBERON:0007100!7.27e-09!18;UBERON:0000948!7.27e-09!18;UBERON:0005498!7.27e-09!18;UBERON:0004140!7.27e-09!18;UBERON:0009881!7.27e-09!18;UBERON:0004141!7.27e-09!18;UBERON:0003084!7.27e-09!18;UBERON:0007005!7.27e-09!18;UBERON:0004139!7.27e-09!18;UBERON:0004291!7.27e-09!18;UBERON:0004111!3.64e-07!122;UBERON:0000025!4.58e-07!114|ontology_enrichment_uberon_v019_2=UBERON:0007100,1.20e-09,18;UBERON:0000948,1.20e-09,18;UBERON:0005498,1.20e-09,18;UBERON:0004140,1.20e-09,18;UBERON:0009881,1.20e-09,18;UBERON:0004141,1.20e-09,18;UBERON:0003084,1.20e-09,18;UBERON:0007005,1.20e-09,18;UBERON:0004139,1.20e-09,18;UBERON:0004291,1.20e-09,18;UBERON:0004535,1.47e-09,23;UBERON:0001009,1.47e-09,23;UBERON:0000025,3.74e-07,114;UBERON:0004111,4.15e-07,122|phase1_expression=0.80074423552397,0.348975407639361,0,0.30246421130683,0.500895729946347,0.16787927191189,0.233612640595526,0.774739940649458,3.66050677594334,5.61754863172784,2.39705155515707,4.94587385771086,2.56801094896809,2.71003247498892,0,0,0.699561878128147,1.73504190947031,1.37114433605739,1.69755860719212,2.72138528483423,0,0,0,0,0,0,0,0.190023419456374,0.252030129759931,0,1.27006134691926,0,0,1.44425809875637,0.166234645358492,1.83752420636132,0,0,0,0.588231488031014,0,0.485510353031154,1.88845226963366,1.92616169317078,0.550640256485045,17.9950009200049,39.4625533048608,60.6333864347142,69.4114739695192,26.0374744223174,47.4383462404406,5.03347818173209,2.90144856804538,2.01656279485478,4.88792928468299,3.15186783932632,5.67239301505187,0,0,0,7.11573517345177,4.4464739805557,1.7997994345628,1.97773272513395,7.8152812644071,24.5672090625092,85.6806820867067,0,0,0.210324961351382,0.856952953211411,1.32521124570968,0.244981598429908,0.191690942036473,0,2.20231761998777,0.638436690425939,2.76491759861238,0.263772575460388,0,1.04182674111352,0.837548997004143,2.8138130501584,1.5279824777681,1.17851434189467,0.427115042397309,0,1.21161909333094,5.59229544790213,21.4499721639242,7.74381489283248,467.820277590932,19.4293148989614,7.14754059192436,4.48026887097336,22.611551641212,1.1930122580464,1.03914401841148,2.12003744706204,1.40843419776681,2.56652954828636,2.54805239706646,0,1.5154372870785,2.28023878927589,4.04419556011827,2.62622923353838,0.517875767294343,0,0.520455980298408,0.304465478312141,0.230615497256059,0.150722640552623,2.82212897125692,1.0053327306374,0.988779870937496,20.9669067533872,10.6153266233985,43.0299820860108,38.2055826936481,18.4252596191384,0,3.51336956413857,3.97948742945565,0.510914110417183,0.479260498023681,1.19980546198682,0.381210681219194,1.79748767285787,3.20250421973039,0.502617408451458,5.9100268865374,2.81287003063364,2.49345653471472,0.486723789203273,1.2220723662038,4.22983700074316,0.758168275301024,1.89397670297827,0,0.229902104433473,0.900310649026746,0.30140963567143,3.19771546011241,2.17793324484245,6.27801554550183,3.10444044886819,0,0.189106080167819,0,0.657587197282725,1.11218899690239,4.52727816478817,3.49829631893504,0,1.40442637462647,0,0.568326998791185,5.17814431338755,4.69052119962192,5.04173772090842,13.494449928357,10.0349758191176,10.4901636763417,10.4640275137684,11.5357562601836,14.3621371111618,10.8609500942897,37.4301818100337,26.428431911949,39.3277966174144,10.5384055339704,12.7496097822353,1.05144974282064,1.02904612379284,0,0,0,0,0,0.201683524623343,0.667134131534611,0.570676878337677,0.474529061544512,0.658795818896044,0.251335208800269,0.397912944082302,0.779856348476481,0,0.648414149624083,0.597423819763102,0.569003702859245,0.685491075658373,0,0.407302655690628,0.581857461502877,0.280543279561274,0.569128834118316,0.295220295959204,0.156998727841375,0.740382983530803,4.44678940630723,0.667380422864376,0,0.449724224769707,0.608580364165509,0.482354319504834,0.50925170356284,0.575392274901621,0.648540907100142,1.37280706594041,1.43768206527355,0.744281895337007,2.18426371180192,1.26289438973556,4.66433275156972,0.482443521363367,8.12914036733061,1.32643988239339,1.14075483509418,2.37643120085263,3.75504397261603,3.35012514883632,2.38043640886014,7.21994497073856,13.24135210492,9.7444463445461,8.92946704481928,7.04612253277673,3.62638461918381,1.59113964439663,0,0.54390568381871,0.491764273019036,1.37968373152366,2.56880943980467,0.937693492737625,0.491804836130026,31.3063949733423,0,0.390438744296638,0.861693590931196,0.716906393857656,1.55959071857676,0.849229592366497,1.61924280669958,2.63030272120181,1.18586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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=71198 | |||
|HGNC= | |||
|MCL_coexpression_id=99 | |||
|TSSclassifier=NA | |||
|UniProt=Q9CUB6 | |||
|association_with_transcript=0bp_to_ENSMUST00000052168,NM_027715,uc008imj.2_5end | |||
|cluster_id=chr2:19579682..19579699,+ | |||
|description=CAGE_peak_2_at_Otud1_5end | |||
|id=chr2:19579682..19579699,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002453,3.77e-07,8;CL:0000333,7.47e-07,10;CL:0000095,7.47e-07,10;CL:0000243,7.47e-07,10;CL:0000123,7.47e-07,10;CL:0000125,7.47e-07,10;CL:0000030,7.47e-07,10;CL:0000339,7.47e-07,10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004535!5.66e-09!23;UBERON:0001009!5.66e-09!23;UBERON:0007100!7.27e-09!18;UBERON:0000948!7.27e-09!18;UBERON:0005498!7.27e-09!18;UBERON:0004140!7.27e-09!18;UBERON:0009881!7.27e-09!18;UBERON:0004141!7.27e-09!18;UBERON:0003084!7.27e-09!18;UBERON:0007005!7.27e-09!18;UBERON:0004139!7.27e-09!18;UBERON:0004291!7.27e-09!18;UBERON:0004111!3.64e-07!122;UBERON:0000025!4.58e-07!114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007100,1.20e-09,18;UBERON:0000948,1.20e-09,18;UBERON:0005498,1.20e-09,18;UBERON:0004140,1.20e-09,18;UBERON:0009881,1.20e-09,18;UBERON:0004141,1.20e-09,18;UBERON:0003084,1.20e-09,18;UBERON:0007005,1.20e-09,18;UBERON:0004139,1.20e-09,18;UBERON:0004291,1.20e-09,18;UBERON:0004535,1.47e-09,23;UBERON:0001009,1.47e-09,23;UBERON:0000025,3.74e-07,114;UBERON:0004111,4.15e-07,122 | |||
|phase1_expression=0.80074423552397,0.348975407639361,0,0.30246421130683,0.500895729946347,0.16787927191189,0.233612640595526,0.774739940649458,3.66050677594334,5.61754863172784,2.39705155515707,4.94587385771086,2.56801094896809,2.71003247498892,0,0,0.699561878128147,1.73504190947031,1.37114433605739,1.69755860719212,2.72138528483423,0,0,0,0,0,0,0,0.190023419456374,0.252030129759931,0,1.27006134691926,0,0,1.44425809875637,0.166234645358492,1.83752420636132,0,0,0,0.588231488031014,0,0.485510353031154,1.88845226963366,1.92616169317078,0.550640256485045,17.9950009200049,39.4625533048608,60.6333864347142,69.4114739695192,26.0374744223174,47.4383462404406,5.03347818173209,2.90144856804538,2.01656279485478,4.88792928468299,3.15186783932632,5.67239301505187,0,0,0,7.11573517345177,4.4464739805557,1.7997994345628,1.97773272513395,7.8152812644071,24.5672090625092,85.6806820867067,0,0,0.210324961351382,0.856952953211411,1.32521124570968,0.244981598429908,0.191690942036473,0,2.20231761998777,0.638436690425939,2.76491759861238,0.263772575460388,0,1.04182674111352,0.837548997004143,2.8138130501584,1.5279824777681,1.17851434189467,0.427115042397309,0,1.21161909333094,5.59229544790213,21.4499721639242,7.74381489283248,467.820277590932,19.4293148989614,7.14754059192436,4.48026887097336,22.611551641212,1.1930122580464,1.03914401841148,2.12003744706204,1.40843419776681,2.56652954828636,2.54805239706646,0,1.5154372870785,2.28023878927589,4.04419556011827,2.62622923353838,0.517875767294343,0,0.520455980298408,0.304465478312141,0.230615497256059,0.150722640552623,2.82212897125692,1.0053327306374,0.988779870937496,20.9669067533872,10.6153266233985,43.0299820860108,38.2055826936481,18.4252596191384,0,3.51336956413857,3.97948742945565,0.510914110417183,0.479260498023681,1.19980546198682,0.381210681219194,1.79748767285787,3.20250421973039,0.502617408451458,5.9100268865374,2.81287003063364,2.49345653471472,0.486723789203273,1.2220723662038,4.22983700074316,0.758168275301024,1.89397670297827,0,0.229902104433473,0.900310649026746,0.30140963567143,3.19771546011241,2.17793324484245,6.27801554550183,3.10444044886819,0,0.189106080167819,0,0.657587197282725,1.11218899690239,4.52727816478817,3.49829631893504,0,1.40442637462647,0,0.568326998791185,5.17814431338755,4.69052119962192,5.04173772090842,13.494449928357,10.0349758191176,10.4901636763417,10.4640275137684,11.5357562601836,14.3621371111618,10.8609500942897,37.4301818100337,26.428431911949,39.3277966174144,10.5384055339704,12.7496097822353,1.05144974282064,1.02904612379284,0,0,0,0,0,0.201683524623343,0.667134131534611,0.570676878337677,0.474529061544512,0.658795818896044,0.251335208800269,0.397912944082302,0.779856348476481,0,0.648414149624083,0.597423819763102,0.569003702859245,0.685491075658373,0,0.407302655690628,0.581857461502877,0.280543279561274,0.569128834118316,0.295220295959204,0.156998727841375,0.740382983530803,4.44678940630723,0.667380422864376,0,0.449724224769707,0.608580364165509,0.482354319504834,0.50925170356284,0.575392274901621,0.648540907100142,1.37280706594041,1.43768206527355,0.744281895337007,2.18426371180192,1.26289438973556,4.66433275156972,0.482443521363367,8.12914036733061,1.32643988239339,1.14075483509418,2.37643120085263,3.75504397261603,3.35012514883632,2.38043640886014,7.21994497073856,13.24135210492,9.7444463445461,8.92946704481928,7.04612253277673,3.62638461918381,1.59113964439663,0,0.54390568381871,0.491764273019036,1.37968373152366,2.56880943980467,0.937693492737625,0.491804836130026,31.3063949733423,0,0.390438744296638,0.861693590931196,0.716906393857656,1.55959071857676,0.849229592366497,1.61924280669958,2.63030272120181,1.18586333383957,3.21321316421807,0.425820255624806,1.24645922567079,2.93196526836437,1.97964147567043,0,0,0,0.377210159511796,0.885905678642318,1.22974059177571,0.775284879504663,0,3.56497378384721,0.316036757935816,1.05418608574999,1.03135543248187,5.44703369206061,0.18006109403131,0,0.214337035031592,0.177340233642274,0,0.164549020602121,2.43571959291679,0.938686832254841,0.21183207086382,0.661585194164886,19.7863503529776,9.20347232166662,5.60910201831849,5.84924485615369,7.05805868903763,0.582961673259701,0.927126510052548,0.683483523191411,0.412773735926445,0.555583582109135,1.13021074202815,0.546776910884101,0.457556346413045,0.339956859987711,1.53946597556024,0.967399816630967,3.81868247206045,0,0.203319467126849,0.216010681643603,0.836353184057875,1.9652630737156,2.29269388854195,4.62859352061881,7.32916637555283,0.777689839750757,1.86401793926078,0.56369293868419,0.448549638131936,0,0.583353565032143,0.387479470433193,0.337912250981556,0.234714477291508,0.2604087696879,0.419437377702843,0,5.47257011889944,1.58005560314089,0,0.205421914329655,0.51968329191118,0.179026695667481,0.39736270956253,0.360586348559907,0.886137163047463,0.706765149637033,0.533447646584999,0.201652370273681,0.974578807397524,0.865906574762965,0.935015217452552,31.062062555284,0.443971906748129,0.62799699626633,0.167884616364078,2.51146472241848,9.1964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| |||
|short_description=p2@Otud1 | |||
}} |
Latest revision as of 08:43, 26 September 2015
Short description: | p2@Otud1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Otud1_5end |
Coexpression cluster: | MCL_coexpression_mm9:99 |
Association with transcript: | 0bp_to_ENSMUST00000052168, NM_027715, uc008imj.2_5end |
EntrezGene: | Otud1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
oligodendrocyte precursor cell | 3.77e-07 | 8 |
migratory neural crest cell | 7.47e-07 | 10 |
neuron associated cell | 7.47e-07 | 10 |
glial cell (sensu Vertebrata) | 7.47e-07 | 10 |
neuron associated cell (sensu Vertebrata) | 7.47e-07 | 10 |
glial cell | 7.47e-07 | 10 |
glioblast | 7.47e-07 | 10 |
glioblast (sensu Vertebrata) | 7.47e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
primary circulatory organ | 1.20e-09 | 18 |
heart | 1.20e-09 | 18 |
primitive heart tube | 1.20e-09 | 18 |
primary heart field | 1.20e-09 | 18 |
anterior lateral plate mesoderm | 1.20e-09 | 18 |
heart tube | 1.20e-09 | 18 |
heart primordium | 1.20e-09 | 18 |
cardiac mesoderm | 1.20e-09 | 18 |
cardiogenic plate | 1.20e-09 | 18 |
heart rudiment | 1.20e-09 | 18 |
cardiovascular system | 1.47e-09 | 23 |
circulatory system | 1.47e-09 | 23 |
tube | 3.74e-07 | 114 |
anatomical conduit | 4.15e-07 | 122 |