Personal tools

FFCP PHASE1:Mm9::chr2:24910017..24910049,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(6 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=56876
|EntrezGene=56876
|HGNC=
|HGNC=
|MCL_coexpression_id=8
|TSSclassifier=NA
|UniProt=A2AJ95
|UniProt=A2AJ95
|association_with_transcript=29bp_to_ENSMUST00000114386,ENSMUST00000144520_5end
|association_with_transcript=29bp_to_ENSMUST00000114386,ENSMUST00000144520_5end
|cluster_id=chr2:24910017..24910049,+
|description=CAGE_peak_3_at_Nelf_5end
|description=CAGE_peak_3_at_Nelf_5end
|id=chr2:24910017..24910049,+
|id=chr2:24910017..24910049,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=CL:0000066,1.05e-08,25;CL:0000239,9.75e-07,6;CL:0000677,9.75e-07,6;CL:0000584,9.75e-07,6
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002365!2.06e-10!25;UBERON:0002330!2.06e-10!25;UBERON:0002107!5.45e-10!22;UBERON:0007499!5.45e-10!22;UBERON:0006925!5.45e-10!22;UBERON:0009497!5.45e-10!22;UBERON:0000015!5.45e-10!22;UBERON:0002423!5.45e-10!22;UBERON:0006235!5.45e-10!22;UBERON:0008835!5.45e-10!22;UBERON:0003894!5.45e-10!22;UBERON:0004161!5.45e-10!22;UBERON:0008836!5.45e-10!22;UBERON:0009854!5.19e-09!23;UBERON:0009856!5.19e-09!23;UBERON:0000025!8.08e-09!114;UBERON:0004111!3.90e-08!122;UBERON:0002020!5.39e-08!34;UBERON:0002791!6.38e-08!29;UBERON:0003528!6.38e-08!29;UBERON:0001893!6.38e-08!29;UBERON:0000956!3.86e-07!21;UBERON:0001869!3.86e-07!21;UBERON:0000203!3.86e-07!21
|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.99e-13,22;UBERON:0007499,1.99e-13,22;UBERON:0006925,1.99e-13,22;UBERON:0009497,1.99e-13,22;UBERON:0000015,1.99e-13,22;UBERON:0002423,1.99e-13,22;UBERON:0006235,1.99e-13,22;UBERON:0008835,1.99e-13,22;UBERON:0003894,1.99e-13,22;UBERON:0004161,1.99e-13,22;UBERON:0008836,1.99e-13,22;UBERON:0009854,1.15e-12,23;UBERON:0009856,1.15e-12,23;UBERON:0002619,5.70e-12,17;UBERON:0002365,2.53e-11,25;UBERON:0002330,2.53e-11,25;UBERON:0002021,4.77e-11,10;UBERON:0000411,4.77e-11,10;UBERON:0001950,4.77e-11,10;UBERON:0000956,4.32e-09,21;UBERON:0001869,4.32e-09,21;UBERON:0000203,4.32e-09,21;UBERON:0011216,2.46e-08,194;UBERON:0003528,6.36e-08,29;UBERON:0002791,6.36e-08,29;UBERON:0001893,6.36e-08,29;UBERON:0003929,1.07e-07,55;UBERON:0000025,1.85e-07,114;UBERON:0002020,3.46e-07,34
|phase1_expression=0,9.77131141390211,7.27998783023258,3.32710632437513,4.50806156951712,0.671517087647559,1.16806320297763,0,0,0.468129052643987,0.171217968225505,0.0797721589953364,0,0.0874204024189974,0.333109761815663,0,0,0,0,0,0.595303031057488,0.0992909512008853,0,0.799962113967033,1.37645568640302,6.89078356938024,3.87685796543167,3.23206849028834,0,1.00812051903972,0.665191531965914,1.90509202037889,1.23012957516914,0,0.866554859253824,0.664938581433969,0.204169356262369,0,0,0,0,0,0,0.377690453926732,0.405507724878058,0.367093504323363,0,0.436050312760893,1.09843091367236,1.1665793944457,0.419959264876088,0,0,0,0,0.771778308107841,0.573066879877513,0.515672092277442,0.202316460859598,0,0,0.338844532069132,0,0.449949858640699,0,0.7104801149461,1.19840044207362,1.15265491596466,0.518448061542388,0.675029691658453,0.420649922702764,0.571301968807607,1.10434270475807,0.122490799214954,0.383381884072945,0,0,1.65993539510744,1.38245879930619,0.395658863190582,0.457438218012048,1.04182674111352,0.558365998002762,0,0.763991238884051,0.294628585473668,0.284743361598206,0.186399445825301,1.21161909333094,1.058001841495,0.869593466105033,49.9045848649204,41.4782513561728,70.701118104554,59.7794304051856,56.0033608871669,15.1679973742292,0.340860645156116,0,0.70667914902068,0.704217098883403,1.28326477414318,0,0,0,0,0,13.8162494460063,0.258937883647172,0.148442139064825,0,0.304465478312141,0.230615497256059,0.301445281105245,0.352766121407114,0.251333182659351,0.247194967734374,0.433798070759735,0,0.485300549842228,0.441683036920787,0,0,0.585561594023094,0,1.02182822083437,0,0,0,0.449371918214468,2.28750301409313,0.502617408451458,0.869121600961382,1.02286182932132,1.0389402227978,1.46017136760982,0.101839363850316,0.497627882440372,1.0108910337347,0.420883711772948,0,0.229902104433473,0.360124259610698,0.60281927134286,0.272145996605311,0.2562274405697,0.0937017245597288,0.517406741478031,0,0.189106080167819,0,0.219195732427575,0,0.348252166522167,0,0.796137067273973,0,0,0,0,0,0.180062061461015,0.23674473558521,0,0.154267112887378,0,0.536546802799238,0,0.16455984991348,0,0.0810688095458557,0.146199987425332,0,0.268412837520744,2.94405927989778,1.13195073617213,4.95628174475697,0.793351699990633,0,0.232236671860439,0,0,0.22237804384487,0,0.474529061544512,0.164698954724011,0,0,0.19496408711912,0,0.432276099749388,1.1948476395262,0.189667900953082,0.342745537829186,0,0.407302655690628,0.581857461502877,0.561086559122548,0.505892296994058,0.295220295959204,0.156998727841375,0.370191491765402,43.2820835547237,0.500535317148282,0.393117990226406,0.449724224769707,0.811440485554012,0,0.763877555344259,0.287696137450811,1.78348749452539,5.49122826376163,8.62609239164127,14.5134969590716,24.0269008298212,41.6755148612734,45.5669430345657,46.7970215722466,0.369506380333209,0,0.162964976442026,0.339490171550376,0,0.167506257441816,0.238043640886014,0,0,0,0.318909537314974,0.327726629431476,0,0.144649058581512,0,0,0.491764273019036,0.551873492609465,0.963303539926752,0.468846746368813,0.491804836130026,0.504941854408746,0.631016438832513,0,0,0,0.445597348164788,0,0,0,0.790575555893047,0.963963949265421,0.709700426041343,0.35613120733451,0.325773918707152,0.659880491890142,0,0,0,0.188605079755898,0,0,0,0.363533729477506,0,0,0,0,0,0.18006109403131,0.129358683782755,0,0.354680467284547,0,0.164549020602121,0.304464949114599,0,0,0,0.16488625294148,0.161464426695906,0.241251699712623,0.238744688006273,0,0.582961673259701,1.11255181206306,0.170870880797853,0.206386867963223,0,0,0,0,0,0,0.138199973804424,0,0,0,0.216010681643603,0,0,0.269728692769641,2.0663363931334,0,0.648074866458964,0.621339313086926,0,0.448549638131936,0.330916980914195,0.583353565032143,0.129159823477731,0.337912250981556,0.234714477291508,0.5208175393758,0.209718688851422,0.483168241652012,0.288030006257865,0,0.202725215290164,0,0.129920822977795,0,0,0.120195449519969,0,0,0,0,0,0,0,0.906921534460845,0,0.179427713218951,0,0.19318959403219,0.750729901804728,0.549454872801795,0,0,1.6942555278512,2.30162618253588,0.572895513439397,1.89038500578056,1.37016503954128,1.5107877947794,2.70009000092722,3.60256962579376,1.35942722695261,2.5888015587591,0.103787347584177,0.798049746802062,0.341467211508268,0,0.209613162627982,0.551530525350042,0,0.412070114477788,0,0,0.25347929989024,0,0.37456602987953,0.0640251524048693,0.34461281373368,0.476293691283074,0.231768651889711,0.192909220463705,0,0.588795680537589,0.342869252385415,0,0,0.290692833264657,0.0941093804153306,0.338458431566706,0.548783918618318,0,0.407412341537585,0.561142271657738,0,0.197008964751127,1.22769312950907,0.154936841185966,0.578719832943424,0,0.233931608445408,0.214871054048298,0.191288332068843,0.441182838239031,0.927471342481686
|phase1_expression=0,9.77131141390211,7.27998783023258,3.32710632437513,4.50806156951712,0.671517087647559,1.16806320297763,0,0,0.468129052643987,0.171217968225505,0.0797721589953364,0,0.0874204024189974,0.333109761815663,0,0,0,0,0,0.595303031057488,0.0992909512008853,0,0.799962113967033,1.37645568640302,6.89078356938024,3.87685796543167,3.23206849028834,0,1.00812051903972,0.665191531965914,1.90509202037889,1.23012957516914,0,0.866554859253824,0.664938581433969,0.204169356262369,0,0,0,0,0,0,0.377690453926732,0.405507724878058,0.367093504323363,0,0.436050312760893,1.09843091367236,1.1665793944457,0.419959264876088,0,0,0,0,0.771778308107841,0.573066879877513,0.515672092277442,0.202316460859598,0,0,0.338844532069132,0,0.449949858640699,0,0.7104801149461,1.19840044207362,1.15265491596466,0.518448061542388,0.675029691658453,0.420649922702764,0.571301968807607,1.10434270475807,0.122490799214954,0.383381884072945,0,0,1.65993539510744,1.38245879930619,0.395658863190582,0.457438218012048,1.04182674111352,0.558365998002762,0,0.763991238884051,0.294628585473668,0.284743361598206,0.186399445825301,1.21161909333094,1.058001841495,0.869593466105033,49.9045848649204,41.4782513561728,70.701118104554,59.7794304051856,56.0033608871669,15.1679973742292,0.340860645156116,0,0.70667914902068,0.704217098883403,1.28326477414318,0,0,0,0,0,13.8162494460063,0.258937883647172,0.148442139064825,0,0.304465478312141,0.230615497256059,0.301445281105245,0.352766121407114,0.251333182659351,0.247194967734374,0.433798070759735,0,0.485300549842228,0.441683036920787,0,0,0.585561594023094,0,1.02182822083437,0,0,0,0.449371918214468,2.28750301409313,0.502617408451458,0.869121600961382,1.02286182932132,1.0389402227978,1.46017136760982,0.101839363850316,0.497627882440372,1.0108910337347,0.420883711772948,0,0.229902104433473,0.360124259610698,0.60281927134286,0.272145996605311,0.2562274405697,0.0937017245597288,0.517406741478031,0,0.189106080167819,0,0.219195732427575,0,0.348252166522167,0,0.796137067273973,0,0,0,0,0,0.180062061461015,0.23674473558521,0,0.154267112887378,0,0.536546802799238,0,0.16455984991348,0,0.0810688095458557,0.146199987425332,0,0.268412837520744,2.94405927989778,1.13195073617213,4.95628174475697,0.793351699990633,0,0.232236671860439,0,0,0.22237804384487,0,0.474529061544512,0.164698954724011,0,0,0.19496408711912,0,0.432276099749388,1.1948476395262,0.189667900953082,0.342745537829186,0,0.407302655690628,0.581857461502877,0.561086559122548,0.505892296994058,0.295220295959204,0.156998727841375,0.370191491765402,43.2820835547237,0.500535317148282,0.393117990226406,0.449724224769707,0.811440485554012,0,0.763877555344259,0.287696137450811,1.78348749452539,5.49122826376163,8.62609239164127,14.5134969590716,24.0269008298212,41.6755148612734,45.5669430345657,46.7970215722466,0.369506380333209,0,0.162964976442026,0.339490171550376,0,0.167506257441816,0.238043640886014,0,0,0,0.318909537314974,0.327726629431476,0,0.144649058581512,0,0,0.491764273019036,0.551873492609465,0.963303539926752,0.468846746368813,0.491804836130026,0.504941854408746,0.631016438832513,0,0,0,0.445597348164788,0,0,0,0.790575555893047,0.963963949265421,0.709700426041343,0.35613120733451,0.325773918707152,0.659880491890142,0,0,0,0.188605079755898,0,0,0,0.363533729477506,0,0,0,0,0,0.18006109403131,0.129358683782755,0,0.354680467284547,0,0.164549020602121,0.304464949114599,0,0,0,0.16488625294148,0.161464426695906,0.241251699712623,0.238744688006273,0,0.582961673259701,1.11255181206306,0.170870880797853,0.206386867963223,0,0,0,0,0,0,0.138199973804424,0,0,0,0.216010681643603,0,0,0.269728692769641,2.0663363931334,0,0.648074866458964,0.621339313086926,0,0.448549638131936,0.330916980914195,0.583353565032143,0.129159823477731,0.337912250981556,0.234714477291508,0.5208175393758,0.209718688851422,0.483168241652012,0.288030006257865,0,0.202725215290164,0,0.129920822977795,0,0,0.120195449519969,0,0,0,0,0,0,0,0.906921534460845,0,0.179427713218951,0,0.19318959403219,0.750729901804728,0.549454872801795,0,0,1.6942555278512,2.30162618253588,0.572895513439397,1.89038500578056,1.37016503954128,1.5107877947794,2.70009000092722,3.60256962579376,1.35942722695261,2.5888015587591,0.103787347584177,0.798049746802062,0.341467211508268,0,0.209613162627982,0.551530525350042,0,0.412070114477788,0,0,0.25347929989024,0,0.37456602987953,0.0640251524048693,0.34461281373368,0.476293691283074,0.231768651889711,0.192909220463705,0,0.588795680537589,0.342869252385415,0,0,0.290692833264657,0.0941093804153306,0.338458431566706,0.548783918618318,0,0.407412341537585,0.561142271657738,0,0.197008964751127,1.22769312950907,0.154936841185966,0.578719832943424,0,0.233931608445408,0.214871054048298,0.191288332068843,0.441182838239031,0.927471342481686
|short_description=p3@Nelf
|short_description=p3@Nelf
}}
}}

Latest revision as of 09:53, 26 September 2015

Short description:p3@Nelf
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Nelf_5end
Coexpression cluster:MCL_coexpression_mm9:8
Association with transcript: 29bp_to_ENSMUST00000114386, ENSMUST00000144520_5end
EntrezGene:Nelf
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Nelf

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I59.77
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I67.28
CD326+ enterocyte, pool1.CNhs13542.11848-124I33.33
CD326+ enterocyte, pool2.CNhs13197.11849-124I44.51
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.67
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I81.17
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.47
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.17
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.08
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.09
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.60
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.10
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.80
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D21.38
GP2+ M cell, pool1.CNhs13228.11845-124H96.89
GP2+ M cell, pool2.CNhs13231.11846-124I13.88
GP2+ M cell, pool3.CNhs13240.11847-124I23.23
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C11.01
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.67
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I31.91
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G61.23
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.87
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.66
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.20
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.38
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.41
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.37
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.44
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B81.10
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C31.17
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.42
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.77
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.57
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C30.20
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.71
Mouse Microglia, donor1.CNhs12629.11718-123C81.20
Mouse Microglia, donor2.CNhs12634.11736-123E81.15
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.52
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.68
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.42
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.10
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.12
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.38
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F31.66
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D71.38
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.40
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.46
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.04
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.56
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.76
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.29
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.28
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.19
Mouse Schwann, donor1.CNhs12507.11728-123D91.21
Mouse Schwann, donor2.CNhs12573.11746-123F91.06
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.87
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F749.90
Mouse hepatocyte, donor1.CNhs13078.11714-123C441.48
Mouse hepatocyte, donor3.CNhs12615.11637-122C870.70
Mouse hepatocyte, donor6.CNhs13090.11822-124F459.78
Mouse hepatocyte, donor8.CNhs13091.11824-124F656.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A715.17
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.34
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.71
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.70
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H11.28
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B613.82
accessory axillary lymph node, adult.CNhs10475.1063-29H90.26
adrenal gland, adult.CNhs10508.49-24D70.15
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.30
adrenal gland, neonate N00.CNhs11191.1311-23C10.35
adrenal gland, neonate N25.CNhs11223.1377-27I30.25
amnion, adult pregnant day17.5.CNhs10488.583-22A80.25
aorta, adult.CNhs10498.46-23H10.43
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.49
bone (os femoris), neonate N16.CNhs11225.1525-43A60.44
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.59
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H71.02
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A40.45
corpus striatum, adult.CNhs10487.19-21D82.29
corpus striatum, neonate N00.CNhs11226.630-43F10.50
cortex, adult.CNhs10473.12-14D50.87
cortex, neonate N30.CNhs11107.1392-42F21.02
diencephalon, adult.CNhs10482.20-12F21.04
diencephalon, neonate N30.CNhs11201.1388-42B21.46
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.10
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.50
epididymis, adult.CNhs10490.58-23B21.01
eyeball, adult.CNhs10484.31-12G40.42
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C90.36
eyeball, embryo E17.CNhs11023.1261-18D40.60
eyeball, neonate N00.CNhs11207.633-15C60.27
eyeball, neonate N01.CNhs11140.1532-43E70.26
eyeball, neonate N02.CNhs11205.1551-44G80.09
eyeball, neonate N16.CNhs11188.777-19A20.52
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.80
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.54
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.08
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.27
hippocampus, adult.CNhs10478.13-16E82.94
hippocampus, neonate N00.CNhs11228.627-43G11.13
intestinal mucosa, adult.CNhs10506.860-29I34.96
intestine, adult.CNhs10496.178-9A30.79
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.43
intestine, neonate N30.CNhs11131.1384-42G11.19
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.34
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.41
kidney, embryo E18.CNhs11001.1288-20C70.58
kidney, neonate N00.CNhs11214.646-21G70.56
kidney, neonate N10.CNhs11206.758-6D50.51
kidney, neonate N20.CNhs11113.832-19I10.30
kidney, neonate N25.CNhs11122.1353-25F30.16
kidney, neonate N30.CNhs11203.1385-42H10.37
liver, adult pregnant day01.CNhs10466.508-5B243.28
liver, embryo E12.CNhs10601.355-15F80.50
liver, embryo E13.CNhs10524.378-3H60.39
liver, embryo E14.CNhs10594.409-16E10.45
liver, embryo E15.CNhs10520.433-16D70.81
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.76
liver, embryo E18.CNhs10579.499-43G40.29
liver, neonate N00.CNhs11117.641-24F41.78
liver, neonate N03.CNhs11123.1345-25G25.49
liver, neonate N06.CNhs11101.684-20A88.63
liver, neonate N07.CNhs11103.716-20H214.51
liver, neonate N10.CNhs11115.751-24B924.03
liver, neonate N20.CNhs11220.823-25A341.68
liver, neonate N25.CNhs11198.1368-26H145.57
liver, neonate N30.CNhs11106.1382-42D146.80
lung, adult.CNhs10474.28-22B10.37
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.34
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.32
lung, neonate N20.CNhs11109.822-18A40.33
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.14
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H20.55
medulla oblongata, adult.CNhs10477.17-12C20.96
medulla oblongata, neonate N30.CNhs11200.1396-42A30.47
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.49
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.50
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.63
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.45
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.79
olfactory brain, adult.CNhs10489.18-22I90.96
ovary, adult.CNhs10507.91-2I70.71
ovary, embryo E18.CNhs11040.505-44H70.36
ovary, neonate N00.CNhs11217.1299-22I40.33
oviduct, adult pregnant day01.CNhs10500.988-6G60.66
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.18
pituitary gland, embryo E13.CNhs11009.370-44C70.13
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.35
pituitary gland, embryo E16.CNhs11036.449-43F60.00
pituitary gland, embryo E17.CNhs11039.1265-44F50.16
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.16
skin, neonate N00.CNhs11124.650-25G40.16
skin, neonate N03.CNhs11215.662-22H30.24
skin, neonate N06.CNhs11097.693-20I50.24
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.58
spinal cord, adult.CNhs10505.24-13C91.11
spleen, adult.CNhs10465.25-2G20.17
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.14
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.22
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.27
stomach, neonate N07.CNhs11210.718-18A92.07
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.65
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.45
testis, embryo E15.CNhs11034.443-27C50.33
testis, embryo E16.CNhs11033.470-26G50.58
testis, embryo E17.CNhs11029.486-18I50.13
testis, embryo E18.CNhs11027.503-18G50.34
testis, neonate N00.CNhs11189.1300-22B70.23
testis, neonate N07.CNhs11222.726-26I40.52
testis, neonate N10.CNhs11204.763-44D90.21
testis, neonate N20.CNhs11110.839-18H30.48
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.12
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.91
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.18
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F50.75
uterus, adult.CNhs10509.92-27E50.55
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11.69
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A22.30
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.57
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D71.89
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A41.37
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A51.51
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A62.70
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A73.60
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A81.36
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A92.59
whole body, embryo E11.CNhs11014.324-5I80.10
whole body, embryo E12.CNhs10587.857-27C90.80
whole body, embryo E13.CNhs10512.372-23H20.34
whole body, embryo E14.5.CNhs10578.420-27D20.00
whole body, embryo E14.CNhs10519.395-14B10.21
whole body, embryo E16.CNhs10514.453-14F20.55
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.37
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.06
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.23
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.09
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.55
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.20
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.23
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.15
whole body, embryo E17.5.CNhs10513.490-9F90.58
whole body, embryo E17.CNhs10517.475-3I50.00
whole body, embryo E18.CNhs10516.493-3B30.23
whole body, neonate N00.CNhs10525.657-19C20.21
whole body, neonate N01.CNhs10576.659-23C60.19
whole body, neonate N06.CNhs10515.692-21D10.44
whole body, neonate N10.CNhs10518.761-6B40.93





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
epithelial cell1.05e-0825
brush border epithelial cell9.75e-076
gut absorptive cell9.75e-076
enterocyte9.75e-076

Uber anatomy
Ontology termp-valuen
liver1.99e-1322
epithelial sac1.99e-1322
digestive gland1.99e-1322
epithelium of foregut-midgut junction1.99e-1322
anatomical boundary1.99e-1322
hepatobiliary system1.99e-1322
foregut-midgut junction1.99e-1322
hepatic diverticulum1.99e-1322
liver primordium1.99e-1322
septum transversum1.99e-1322
liver bud1.99e-1322
digestive tract diverticulum1.15e-1223
sac1.15e-1223
regional part of cerebral cortex5.70e-1217
exocrine gland2.53e-1125
exocrine system2.53e-1125
occipital lobe4.77e-1110
visual cortex4.77e-1110
neocortex4.77e-1110
cerebral cortex4.32e-0921
cerebral hemisphere4.32e-0921
pallium4.32e-0921
organ system subdivision2.46e-08194
brain grey matter6.36e-0829
regional part of telencephalon6.36e-0829
telencephalon6.36e-0829
gut epithelium1.07e-0755
tube1.85e-07114
gray matter3.46e-0734
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr2:24910017..24910049,%2B&oldid=4247067"