FFCP PHASE1:Mm9::chr2:24950672..24950689,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=241275 | |EntrezGene=241275 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1221 | |||
|TSSclassifier=NA | |||
|UniProt=Q8CJ00 | |UniProt=Q8CJ00 | ||
|association_with_transcript=-3bp_to_ENSMUST00000044018_5end | |association_with_transcript=-3bp_to_ENSMUST00000044018_5end | ||
|cluster_id=chr2:24950672..24950689,- | |||
|description=CAGE_peak_1_at_Noxa1_5end | |description=CAGE_peak_1_at_Noxa1_5end | ||
|id=chr2:24950672..24950689,- | |id=chr2:24950672..24950689,- | ||
|ontology_enrichment_celltype=CL:0002563!2.61e-08!9;CL:0002251!2.61e-08!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,3.98e-14,9;CL:0002251,3.98e-14,9;CL:0000075,4.91e-10,7;CL:0000239,4.48e-09,6;CL:0000677,4.48e-09,6;CL:0000584,4.48e-09,6;CL:0000066,2.89e-08,25;CL:0002076,1.22e-07,15 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!5.68e-32!59;UBERON:0000160!1.46e-30!43;UBERON:0001007!9.37e-19!128;UBERON:0001555!9.37e-19!128;UBERON:0007026!9.37e-19!128;UBERON:0004119!5.04e-18!130;UBERON:0000925!5.04e-18!130;UBERON:0006595!5.04e-18!130;UBERON:0004921!1.95e-17!126;UBERON:0004185!1.95e-17!126;UBERON:0000344!7.22e-13!15;UBERON:0002108!7.76e-12!16;UBERON:0001242!2.29e-11!13;UBERON:0000060!2.29e-11!13;UBERON:0001262!2.29e-11!13;UBERON:0004786!2.29e-11!13;UBERON:0001045!9.73e-10!13;UBERON:0000485!2.99e-09!11;UBERON:0001264!7.64e-09!12;UBERON:0003922!7.64e-09!12;UBERON:0002114!7.64e-09!12;UBERON:0003923!7.64e-09!12;UBERON:0003924!7.64e-09!12;UBERON:0003921!7.64e-09!12;UBERON:0003350!2.61e-08!9;UBERON:0004808!2.61e-08!9;UBERON:0001277!2.61e-08!9;UBERON:0004923!1.62e-07!24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,3.59e-36,31;UBERON:0005409,6.82e-35,47;UBERON:0000344,1.29e-22,15;UBERON:0001242,8.15e-20,13;UBERON:0001262,8.15e-20,13;UBERON:0004786,8.15e-20,13;UBERON:0001264,1.05e-15,12;UBERON:0004923,2.41e-14,24;UBERON:0003350,3.98e-14,9;UBERON:0004808,3.98e-14,9;UBERON:0001277,3.98e-14,9;UBERON:0001007,4.23e-14,116;UBERON:0001555,4.23e-14,116;UBERON:0007026,4.23e-14,116;UBERON:0004119,1.13e-13,118;UBERON:0000925,1.13e-13,118;UBERON:0006595,1.13e-13,118;UBERON:0000485,1.75e-13,11;UBERON:0004921,1.72e-12,114;UBERON:0002075,1.49e-10,19;UBERON:0002108,4.70e-07,4 | |||
|phase1_expression=0.960893082628764,5.23463111459042,3.18499467572675,2.11724947914781,4.50806156951712,3.86122325397347,7.47560449905682,0.516493293766305,0,0,0,0,0,0,0,0,0,0,0,0,0.595303031057488,0,0,5.27974995218242,6.19405058881359,5.16808767703518,5.59990595006797,4.09395342103189,6.46079626151671,8.06496415231778,11.3082560434205,0,0,0,28.5963103553762,30.9196440366796,22.662798545123,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142371680799103,0,0,0,0,0,0,0,0,0,0.561777680527007,0,0,0,1.40843419776681,0,0,0,0,0,0,0.68510327831436,0.258937883647172,0,0.346970653532272,0,0.230615497256059,0,0,0,0,0,0,0.161766849947409,0,0,24.2309289583559,0,0,6.89734049063197,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0,0.420883711772948,0.260240885925407,0.459804208866946,0,0,0.0680364991513279,0,0,0,0,0,0,0,0.278047249225598,0,0.205782136407943,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.97376904685418,1.32225283331772,0.426576501070468,0.232236671860439,1.15980715189884,1.61346819698674,1.11189021922435,2.09248188723815,4.2707615539006,1.31759163779209,2.5133520880027,2.38747766449381,2.14460495831032,1.79763881730844,6.48414149624083,9.16049856970089,0.189667900953082,0.114248512609729,0,0.203651327845314,0,0.140271639780637,0,0,0,0,0,0.500535317148282,0,0.899448449539415,1.62288097110802,0,0.50925170356284,0,0.162135226775035,0.549122826376163,0,1.11642284300551,0.312037673114561,0,0,0.482443521363367,0.184753190166605,0,0.162964976442026,0,0.469380496577004,1.00503754465089,0.476087281772027,1.36593553500459,0.157635144106191,0.664394068946325,0.637819074629948,0,1.03610989119537,0.723245292907558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0.178065603667255,0.162886959353576,3.79431282836832,2.65490276679926,10.6823479908192,18.4417369748498,14.7111962209601,9.7449624650655,9.53048958626175,6.97756391554197,6.5436071305951,12.83390562185,1.58018378967908,5.27093042874994,0,0,0,0.129358683782755,0,0,0,0,0,0,0,0,0,0,0,0,0.164140899745061,2.04036585640896,0,0,3.30218988741156,0,0.188368457004691,0,0,0.339956859987711,0.139951452323658,0.690999869022119,8.59203556213602,0,3.45643094115643,1.08005340821801,0.209088296014469,0.436725127492355,0.674321731924103,1.1571483801547,2.35580347785627,22.2937754061884,0,0,0.299033092087958,0,0,0,0.337912250981556,0,0.13020438484395,0.104859344425711,0,0,0,0,0,0,0.179026695667481,0,0,0,0,0,0,0,0,0,0.680191150845634,0,0,0,0,0,4.57879060668163,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0,0.209613162627982,0.183843508450014,0.222246727801615,0.412070114477788,0,0.252697211763798,0,0,0.280924522409647,0.128050304809739,0.17230640686684,0,0.115884325944855,0.192909220463705,0,0.147198920134397,0,0.177475806159338,0.238436189947321,0.436039249896986,0.0941093804153306,0,0,0,0.407412341537585,0,0.237270036248348,0.197008964751127,0,0.154936841185966,0.578719832943424,0.249810577937946,0,0.214871054048298,0,0.441182838239031,0 | |phase1_expression=0.960893082628764,5.23463111459042,3.18499467572675,2.11724947914781,4.50806156951712,3.86122325397347,7.47560449905682,0.516493293766305,0,0,0,0,0,0,0,0,0,0,0,0,0.595303031057488,0,0,5.27974995218242,6.19405058881359,5.16808767703518,5.59990595006797,4.09395342103189,6.46079626151671,8.06496415231778,11.3082560434205,0,0,0,28.5963103553762,30.9196440366796,22.662798545123,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142371680799103,0,0,0,0,0,0,0,0,0,0.561777680527007,0,0,0,1.40843419776681,0,0,0,0,0,0,0.68510327831436,0.258937883647172,0,0.346970653532272,0,0.230615497256059,0,0,0,0,0,0,0.161766849947409,0,0,24.2309289583559,0,0,6.89734049063197,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0,0.420883711772948,0.260240885925407,0.459804208866946,0,0,0.0680364991513279,0,0,0,0,0,0,0,0.278047249225598,0,0.205782136407943,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.97376904685418,1.32225283331772,0.426576501070468,0.232236671860439,1.15980715189884,1.61346819698674,1.11189021922435,2.09248188723815,4.2707615539006,1.31759163779209,2.5133520880027,2.38747766449381,2.14460495831032,1.79763881730844,6.48414149624083,9.16049856970089,0.189667900953082,0.114248512609729,0,0.203651327845314,0,0.140271639780637,0,0,0,0,0,0.500535317148282,0,0.899448449539415,1.62288097110802,0,0.50925170356284,0,0.162135226775035,0.549122826376163,0,1.11642284300551,0.312037673114561,0,0,0.482443521363367,0.184753190166605,0,0.162964976442026,0,0.469380496577004,1.00503754465089,0.476087281772027,1.36593553500459,0.157635144106191,0.664394068946325,0.637819074629948,0,1.03610989119537,0.723245292907558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0.178065603667255,0.162886959353576,3.79431282836832,2.65490276679926,10.6823479908192,18.4417369748498,14.7111962209601,9.7449624650655,9.53048958626175,6.97756391554197,6.5436071305951,12.83390562185,1.58018378967908,5.27093042874994,0,0,0,0.129358683782755,0,0,0,0,0,0,0,0,0,0,0,0,0.164140899745061,2.04036585640896,0,0,3.30218988741156,0,0.188368457004691,0,0,0.339956859987711,0.139951452323658,0.690999869022119,8.59203556213602,0,3.45643094115643,1.08005340821801,0.209088296014469,0.436725127492355,0.674321731924103,1.1571483801547,2.35580347785627,22.2937754061884,0,0,0.299033092087958,0,0,0,0.337912250981556,0,0.13020438484395,0.104859344425711,0,0,0,0,0,0,0.179026695667481,0,0,0,0,0,0,0,0,0,0.680191150845634,0,0,0,0,0,4.57879060668163,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0,0.209613162627982,0.183843508450014,0.222246727801615,0.412070114477788,0,0.252697211763798,0,0,0.280924522409647,0.128050304809739,0.17230640686684,0,0.115884325944855,0.192909220463705,0,0.147198920134397,0,0.177475806159338,0.238436189947321,0.436039249896986,0.0941093804153306,0,0,0,0.407412341537585,0,0.237270036248348,0.197008964751127,0,0.154936841185966,0.578719832943424,0.249810577937946,0,0.214871054048298,0,0.441182838239031,0 | ||
|short_description=p1@Noxa1 | |short_description=p1@Noxa1 | ||
}} | }} |
Latest revision as of 09:54, 26 September 2015
Short description: | p1@Noxa1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Noxa1_5end |
Coexpression cluster: | MCL_coexpression_mm9:1221 |
Association with transcript: | -3bp_to_ENSMUST00000044018_5end |
EntrezGene: | Noxa1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 3.98e-14 | 9 |
epithelial cell of alimentary canal | 3.98e-14 | 9 |
columnar/cuboidal epithelial cell | 4.91e-10 | 7 |
brush border epithelial cell | 4.48e-09 | 6 |
gut absorptive cell | 4.48e-09 | 6 |
enterocyte | 4.48e-09 | 6 |
epithelial cell | 2.89e-08 | 25 |
endo-epithelial cell | 1.22e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
intestine | 3.59e-36 | 31 |
gastrointestinal system | 6.82e-35 | 47 |
mucosa | 1.29e-22 | 15 |
intestinal mucosa | 8.15e-20 | 13 |
wall of intestine | 8.15e-20 | 13 |
gastrointestinal system mucosa | 8.15e-20 | 13 |
pancreas | 1.05e-15 | 12 |
organ component layer | 2.41e-14 | 24 |
epithelium of mucosa | 3.98e-14 | 9 |
gastrointestinal system epithelium | 3.98e-14 | 9 |
intestinal epithelium | 3.98e-14 | 9 |
digestive system | 4.23e-14 | 116 |
digestive tract | 4.23e-14 | 116 |
primitive gut | 4.23e-14 | 116 |
endoderm-derived structure | 1.13e-13 | 118 |
endoderm | 1.13e-13 | 118 |
presumptive endoderm | 1.13e-13 | 118 |
simple columnar epithelium | 1.75e-13 | 11 |
subdivision of digestive tract | 1.72e-12 | 114 |
viscus | 1.49e-10 | 19 |
small intestine | 4.70e-07 | 4 |