FFCP PHASE1:Mm9::chr2:25118076..25118083,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=97031 | |EntrezGene=97031 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=A2AI08 | |UniProt=A2AI08 | ||
|association_with_transcript=-34bp_to_ENSMUST00000051033,NM_175286,uc008ira.2_5end | |association_with_transcript=-34bp_to_ENSMUST00000051033,NM_175286,uc008ira.2_5end | ||
|cluster_id=chr2:25118076..25118083,+ | |||
|description=CAGE_peak_4_at_Tprn_5end | |description=CAGE_peak_4_at_Tprn_5end | ||
|id=chr2:25118076..25118083,+ | |id=chr2:25118076..25118083,+ | ||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,2.66e-12,6;CL:0000677,2.66e-12,6;CL:0000584,2.66e-12,6;CL:0000075,2.06e-10,7;CL:0002563,6.78e-08,9;CL:0002251,6.78e-08,9;CL:0000473,2.80e-07,7;CL:0000682,3.09e-07,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!2.23e-08!15;UBERON:0001242!1.60e-07!13;UBERON:0000060!1.60e-07!13;UBERON:0001262!1.60e-07!13;UBERON:0004786!1.60e-07!13;UBERON:0007023!1.60e-07!51 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.75e-20,31;UBERON:0001242,1.23e-13,13;UBERON:0001262,1.23e-13,13;UBERON:0004786,1.23e-13,13;UBERON:0005409,1.32e-11,47;UBERON:0000344,1.63e-11,15;UBERON:0004733,1.20e-08,6;UBERON:0004732,1.20e-08,6;UBERON:0002028,1.20e-08,6;UBERON:0007277,1.20e-08,6;UBERON:0003350,6.78e-08,9;UBERON:0004808,6.78e-08,9;UBERON:0001277,6.78e-08,9;UBERON:0002108,1.51e-07,4;UBERON:0007023,2.21e-07,51;UBERON:0003076,2.33e-07,12;UBERON:0003057,2.33e-07,12;UBERON:0011216,7.90e-07,194 | |||
|phase1_expression=0.320297694209588,3.48975407639361,3.18499467572675,5.14189159221611,6.51164448930251,1.6787927191189,1.40167584357315,0,0,0,0,0.0797721589953364,0,0,0,0,0,0.157731082679119,0,0,0.680346321208558,0.297872853602656,0.522399578277871,0.799962113967033,0.91763712426868,4.59385571292016,5.1691439539089,1.939241094173,1.52018735565099,1.00812051903972,1.55211357458713,0,0,0,0,0.498703936075477,0.612508068787107,0,0,0,0.588231488031014,0,0,0.251793635951155,0.101376931219515,0.183546752161682,0,1.30815093828268,1.09843091367236,1.74986909166855,0.139986421625363,1.43752564364972,0,0,0.672187598284928,0.257259436035947,0,0,0.404632921719196,0,0,0,0,0.449949858640699,0,0,0.898800331555214,1.92109152660777,0,0,0,0.285650984403804,1.76694832761291,0.122490799214954,0.383381884072945,0,2.20231761998777,1.0214987046815,1.38245879930619,0.395658863190582,0.365950574409639,0,1.3959149950069,0.56276261003168,0.916789486660861,0.589257170947335,0.142371680799103,0,0.151452386666368,0.151143120213571,0,0,0,0.539703191637817,0,0,0.140444420131752,0,0,0,0,0,0,0,0.216491041011214,0,0,0.5709193985953,0,0,0.173485326766136,0,0,0,0.117588707135705,0.125666591329675,0.494389935468748,0,0,0.161766849947409,0,0,3.72783522436244,4.68449275218475,3.97948742945565,1.02182822083437,0,0.599902730993408,0,0.748953197024114,3.20250421973039,0.125654352112864,0.347648640384553,1.02286182932132,1.0389402227978,3.40706652442291,0,0,0.252722758433675,0.420883711772948,0,0,0.180062129805349,0.30140963567143,0.748401490664606,0.384341160854549,0.655912071918102,0,0,0,0,0,0,0.348252166522167,0.205782136407943,0.199034266818493,0,0,0,0,0.234526059981096,0.180062061461015,0.23674473558521,0,0.154267112887378,0,0,0.116765342367169,0,0.164167464079095,0,0,0,0.268412837520744,1.47202963994889,0.720332286654991,3.63460661282178,2.11560453330835,0,0,0,0.201683524623343,1.55664630691409,0.380451252225118,2.84717436926707,1.15289268306808,1.50801125280162,0.397912944082302,1.36474860983384,0.898819408654221,1.29682829924817,0.199141273254367,0,0.114248512609729,0,0,0.193952487167626,0.210407459670956,0.126473074248515,0.147610147979602,0.31399745568275,0,0,0,0.393117990226406,0.224862112384854,0.202860121388503,0,0,0,0.486405680325106,0,0,0,0,0,0,0,0.369506380333209,0,0,0,0,0.167506257441816,0,0.195133647857799,0,0.221464689648775,0.159454768657487,0.163863314715738,0,0.144649058581512,1.50791283939272,0,0,1.10374698521893,1.76605648986571,5.86058432961016,0,0,0,0,0,0.477937595905104,0.445597348164788,0.283076530788832,0,0,0.395287777946524,0.963963949265421,0.425820255624806,0.178065603667255,0,1.15479086080775,0,0.242780636154981,0,0,0,0,0,0,0,0,0,0,0.680879211507576,0,0,0,0,0,0.164549020602121,0.304464949114599,0,0,0,0.16488625294148,0,0,0.477489376012546,0,2.04036585640896,1.29797711407357,0,0,0,0,0.27338845544205,0.228778173206523,0.509935289981566,0,0,0.954670618015114,0,0,0.216010681643603,0.418176592028937,0.218362563746178,0,0.165306911450672,0.26175594198403,0.518459893167171,0,1.12738587736838,0.299033092087958,0.165458490457098,0,0,0,0.117357238645754,0.39061315453185,0.104859344425711,0,0,0,0,0.102710957164827,0,0,0,0.120195449519969,0,0,0.15241361331,0.201652370273681,0,0.192423683280659,0,0.453460767230423,0,0.179427713218951,0,0.772758376128762,0.375364950902364,1.09890974560359,0.857473516316263,0,0,0.920650473014354,0,0.171853182343688,0,0,0.675022500231806,0,0.453142408984205,1.55328093525546,0,0,0.170733605754134,0,0,0,0,0,0,0,0.25347929989024,0,0.0936415074698824,0.0640251524048693,0.114870937911227,0,0,0,0,0.294397840268795,0,0,0,0.145346416632329,0.188218760830661,0.0846146078916765,0,0,0.407412341537585,0.561142271657738,0,0.0985044823755635,0,0,0.192906610981141,0.499621155875892,0.467863216890817,0,0.57386499620653,0.220591419119515,0 | |phase1_expression=0.320297694209588,3.48975407639361,3.18499467572675,5.14189159221611,6.51164448930251,1.6787927191189,1.40167584357315,0,0,0,0,0.0797721589953364,0,0,0,0,0,0.157731082679119,0,0,0.680346321208558,0.297872853602656,0.522399578277871,0.799962113967033,0.91763712426868,4.59385571292016,5.1691439539089,1.939241094173,1.52018735565099,1.00812051903972,1.55211357458713,0,0,0,0,0.498703936075477,0.612508068787107,0,0,0,0.588231488031014,0,0,0.251793635951155,0.101376931219515,0.183546752161682,0,1.30815093828268,1.09843091367236,1.74986909166855,0.139986421625363,1.43752564364972,0,0,0.672187598284928,0.257259436035947,0,0,0.404632921719196,0,0,0,0,0.449949858640699,0,0,0.898800331555214,1.92109152660777,0,0,0,0.285650984403804,1.76694832761291,0.122490799214954,0.383381884072945,0,2.20231761998777,1.0214987046815,1.38245879930619,0.395658863190582,0.365950574409639,0,1.3959149950069,0.56276261003168,0.916789486660861,0.589257170947335,0.142371680799103,0,0.151452386666368,0.151143120213571,0,0,0,0.539703191637817,0,0,0.140444420131752,0,0,0,0,0,0,0,0.216491041011214,0,0,0.5709193985953,0,0,0.173485326766136,0,0,0,0.117588707135705,0.125666591329675,0.494389935468748,0,0,0.161766849947409,0,0,3.72783522436244,4.68449275218475,3.97948742945565,1.02182822083437,0,0.599902730993408,0,0.748953197024114,3.20250421973039,0.125654352112864,0.347648640384553,1.02286182932132,1.0389402227978,3.40706652442291,0,0,0.252722758433675,0.420883711772948,0,0,0.180062129805349,0.30140963567143,0.748401490664606,0.384341160854549,0.655912071918102,0,0,0,0,0,0,0.348252166522167,0.205782136407943,0.199034266818493,0,0,0,0,0.234526059981096,0.180062061461015,0.23674473558521,0,0.154267112887378,0,0,0.116765342367169,0,0.164167464079095,0,0,0,0.268412837520744,1.47202963994889,0.720332286654991,3.63460661282178,2.11560453330835,0,0,0,0.201683524623343,1.55664630691409,0.380451252225118,2.84717436926707,1.15289268306808,1.50801125280162,0.397912944082302,1.36474860983384,0.898819408654221,1.29682829924817,0.199141273254367,0,0.114248512609729,0,0,0.193952487167626,0.210407459670956,0.126473074248515,0.147610147979602,0.31399745568275,0,0,0,0.393117990226406,0.224862112384854,0.202860121388503,0,0,0,0.486405680325106,0,0,0,0,0,0,0,0.369506380333209,0,0,0,0,0.167506257441816,0,0.195133647857799,0,0.221464689648775,0.159454768657487,0.163863314715738,0,0.144649058581512,1.50791283939272,0,0,1.10374698521893,1.76605648986571,5.86058432961016,0,0,0,0,0,0.477937595905104,0.445597348164788,0.283076530788832,0,0,0.395287777946524,0.963963949265421,0.425820255624806,0.178065603667255,0,1.15479086080775,0,0.242780636154981,0,0,0,0,0,0,0,0,0,0,0.680879211507576,0,0,0,0,0,0.164549020602121,0.304464949114599,0,0,0,0.16488625294148,0,0,0.477489376012546,0,2.04036585640896,1.29797711407357,0,0,0,0,0.27338845544205,0.228778173206523,0.509935289981566,0,0,0.954670618015114,0,0,0.216010681643603,0.418176592028937,0.218362563746178,0,0.165306911450672,0.26175594198403,0.518459893167171,0,1.12738587736838,0.299033092087958,0.165458490457098,0,0,0,0.117357238645754,0.39061315453185,0.104859344425711,0,0,0,0,0.102710957164827,0,0,0,0.120195449519969,0,0,0.15241361331,0.201652370273681,0,0.192423683280659,0,0.453460767230423,0,0.179427713218951,0,0.772758376128762,0.375364950902364,1.09890974560359,0.857473516316263,0,0,0.920650473014354,0,0.171853182343688,0,0,0.675022500231806,0,0.453142408984205,1.55328093525546,0,0,0.170733605754134,0,0,0,0,0,0,0,0.25347929989024,0,0.0936415074698824,0.0640251524048693,0.114870937911227,0,0,0,0,0.294397840268795,0,0,0,0.145346416632329,0.188218760830661,0.0846146078916765,0,0,0.407412341537585,0.561142271657738,0,0.0985044823755635,0,0,0.192906610981141,0.499621155875892,0.467863216890817,0,0.57386499620653,0.220591419119515,0 | ||
|short_description=p4@Tprn | |short_description=p4@Tprn | ||
}} | }} |
Latest revision as of 10:04, 26 September 2015
Short description: | p4@Tprn |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Tprn_5end |
Coexpression cluster: | NA |
Association with transcript: | -34bp_to_ENSMUST00000051033, NM_175286, uc008ira.2_5end |
EntrezGene: | Tprn |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 2.66e-12 | 6 |
gut absorptive cell | 2.66e-12 | 6 |
enterocyte | 2.66e-12 | 6 |
columnar/cuboidal epithelial cell | 2.06e-10 | 7 |
intestinal epithelial cell | 6.78e-08 | 9 |
epithelial cell of alimentary canal | 6.78e-08 | 9 |
defensive cell | 2.80e-07 | 7 |
M cell of gut | 3.09e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
intestine | 2.75e-20 | 31 |
intestinal mucosa | 1.23e-13 | 13 |
wall of intestine | 1.23e-13 | 13 |
gastrointestinal system mucosa | 1.23e-13 | 13 |
gastrointestinal system | 1.32e-11 | 47 |
mucosa | 1.63e-11 | 15 |
segmental subdivision of hindbrain | 1.20e-08 | 6 |
segmental subdivision of nervous system | 1.20e-08 | 6 |
hindbrain | 1.20e-08 | 6 |
presumptive hindbrain | 1.20e-08 | 6 |
epithelium of mucosa | 6.78e-08 | 9 |
gastrointestinal system epithelium | 6.78e-08 | 9 |
intestinal epithelium | 6.78e-08 | 9 |
small intestine | 1.51e-07 | 4 |
adult organism | 2.21e-07 | 51 |
posterior neural tube | 2.33e-07 | 12 |
chordal neural plate | 2.33e-07 | 12 |
organ system subdivision | 7.90e-07 | 194 |