FFCP PHASE1:Mm9::chr1:140745165..140745180,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=16876 | |EntrezGene=16876 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=141 | |MCL_coexpression_id=141 | ||
|TSSclassifier=NA | |||
|UniProt=Q9WUH2 | |UniProt=Q9WUH2 | ||
|association_with_transcript=-12bp_to_ENSMUST00000112030_5end | |association_with_transcript=-12bp_to_ENSMUST00000112030_5end | ||
|cluster_id=chr1:140745165..140745180,- | |||
|description=CAGE_peak_6_at_Lhx9_5end | |description=CAGE_peak_6_at_Lhx9_5end | ||
|id=chr1:140745165..140745180,- | |id=chr1:140745165..140745180,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0002613,2.30e-30,3;CL:0000120,4.54e-30,3;CL:0000117,1.77e-15,23;CL:0000337,1.77e-15,23;CL:0000393,3.36e-12,39;CL:0000211,3.36e-12,39;CL:0000540,8.72e-11,33;CL:0000047,8.72e-11,33;CL:0000031,8.72e-11,33;CL:0000404,8.72e-11,33;CL:0002319,2.93e-08,43;CL:0000221,4.54e-08,44;CL:0000133,4.54e-08,44 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000369,1.54e-18,5;UBERON:0002435,1.54e-18,5;UBERON:0000204,1.54e-18,5;UBERON:0010082,1.54e-18,5;UBERON:0002420,7.55e-12,8;UBERON:0007245,7.55e-12,8;UBERON:0010009,7.55e-12,8;UBERON:0010011,7.55e-12,8;UBERON:0000454,7.55e-12,8 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03134418455488,2.63011399117477,3.1739458756322,3.1691570175309,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383062014255563,0.153606533256243,4.3522474950964,4.7573574673253,2.6045668527838,0,0,0,0.294628585473668,0,0.372798891650601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150722640552623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.599162557619291,0,0,0,0,0.20778804455956,0,0,0,0,0,0,0,0,0,0.136072998302656,0,0.655912071918102,0,1.94011193639558,1.13463648100692,0.527853372491847,0,0,0,0,0.199034266818493,0,0,0,0.414251545071004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196558995113203,0,0,0.241177159752417,0,0,0,0,0,0,0,0.252578877947112,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242780636154981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177340233642274,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206386867963223,0.185194527369712,0.188368457004691,0,0,0,0,0,0,0.474503990371703,0,0,0,0.218362563746178,0.134864346384821,0,0,0,0,0,0.448549638131936,0.165458490457098,0,0,0,0.117357238645754,0.13020438484395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.415149390336707,0.399024873401031,0.341467211508268,0,0,0,0.222246727801615,0.206035057238894,0,0.252697211763798,0,0,0.0936415074698824,0.128050304809739,0.114870937911227,0.476293691283074,0.231768651889711,0.192909220463705,0,0.147198920134397,0.342869252385415,0,0.476872379894642,0,0.0941093804153306,0.169229215783353,0.365855945745545,0.526139422875686,0,0,0.118635018124174,0,0.818462086339379,0,0.192906610981141,0,0.233931608445408,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03134418455488,2.63011399117477,3.1739458756322,3.1691570175309,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383062014255563,0.153606533256243,4.3522474950964,4.7573574673253,2.6045668527838,0,0,0,0.294628585473668,0,0.372798891650601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150722640552623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.599162557619291,0,0,0,0,0.20778804455956,0,0,0,0,0,0,0,0,0,0.136072998302656,0,0.655912071918102,0,1.94011193639558,1.13463648100692,0.527853372491847,0,0,0,0,0.199034266818493,0,0,0,0.414251545071004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196558995113203,0,0,0.241177159752417,0,0,0,0,0,0,0,0.252578877947112,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242780636154981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177340233642274,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206386867963223,0.185194527369712,0.188368457004691,0,0,0,0,0,0,0.474503990371703,0,0,0,0.218362563746178,0.134864346384821,0,0,0,0,0,0.448549638131936,0.165458490457098,0,0,0,0.117357238645754,0.13020438484395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.415149390336707,0.399024873401031,0.341467211508268,0,0,0,0.222246727801615,0.206035057238894,0,0.252697211763798,0,0,0.0936415074698824,0.128050304809739,0.114870937911227,0.476293691283074,0.231768651889711,0.192909220463705,0,0.147198920134397,0.342869252385415,0,0.476872379894642,0,0.0941093804153306,0.169229215783353,0.365855945745545,0.526139422875686,0,0,0.118635018124174,0,0.818462086339379,0,0.192906610981141,0,0.233931608445408,0,0,0,0 | ||
|short_description=p6@Lhx9 | |short_description=p6@Lhx9 | ||
}} | }} |
Latest revision as of 12:06, 26 September 2015
Short description: | p6@Lhx9 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Lhx9_5end |
Coexpression cluster: | MCL_coexpression_mm9:141 |
Association with transcript: | -12bp_to_ENSMUST00000112030_5end |
EntrezGene: | Lhx9 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
striatum neuron | 2.30e-30 | 3 |
granule cell | 4.54e-30 | 3 |
CNS neuron (sensu Vertebrata) | 1.77e-15 | 23 |
neuroblast (sensu Vertebrata) | 1.77e-15 | 23 |
electrically responsive cell | 3.36e-12 | 39 |
electrically active cell | 3.36e-12 | 39 |
neuron | 8.72e-11 | 33 |
neuronal stem cell | 8.72e-11 | 33 |
neuroblast | 8.72e-11 | 33 |
electrically signaling cell | 8.72e-11 | 33 |
neural cell | 2.93e-08 | 43 |
ectodermal cell | 4.54e-08 | 44 |
neurectodermal cell | 4.54e-08 | 44 |
Ontology term | p-value | n |
---|---|---|
corpus striatum | 1.54e-18 | 5 |
striatum | 1.54e-18 | 5 |
ventral part of telencephalon | 1.54e-18 | 5 |
future corpus striatum | 1.54e-18 | 5 |
basal ganglion | 7.55e-12 | 8 |
nuclear complex of neuraxis | 7.55e-12 | 8 |
aggregate regional part of brain | 7.55e-12 | 8 |
collection of basal ganglia | 7.55e-12 | 8 |
cerebral subcortex | 7.55e-12 | 8 |