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FFCP PHASE1:Mm9::chr6:115712364..115712398,-: Difference between revisions

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{{FFCP|EntrezGene=94346|HGNC=|MCL_coexpression_id=57|UniProt=Q4FJU9,E9Q6I9|association_with_transcript=85bp_to_ENSMUST00000166254,ENSMUST00000170625,NM_001168256,NM_001168257,uc012eqn.1,uc012eqo.1_5end|description=CAGE_peak_2_at_Tmem40_5end|id=chr6:115712364..115712398,-|ontology_enrichment_celltype=CL:0000333!1.97e-09!10;CL:0000095!1.97e-09!10;CL:0000243!1.97e-09!10;CL:0000123!1.97e-09!10;CL:0000125!1.97e-09!10;CL:0000030!1.97e-09!10;CL:0000339!1.97e-09!10;CL:0002453!9.29e-08!8;CL:0000221!3.36e-07!44;CL:0000133!3.36e-07!44;CL:0002319!7.91e-07!43|ontology_enrichment_celltype_v019_2=CL:0000333,2.50e-19,10;CL:0000095,2.50e-19,10;CL:0000243,2.50e-19,10;CL:0000123,2.50e-19,10;CL:0000125,2.50e-19,10;CL:0000030,2.50e-19,10;CL:0000339,2.50e-19,10;CL:0002453,6.49e-14,8;CL:0000128,3.86e-13,6;CL:0000126,3.86e-13,6;CL:0000127,3.86e-13,6;CL:0002319,3.10e-08,43;CL:0000221,5.36e-08,44;CL:0000133,5.36e-08,44;CL:0002603,2.27e-07,2;CL:0000217,2.63e-07,2;CL:0000328,2.63e-07,2;CL:0002573,2.63e-07,2;CL:0002376,2.63e-07,2;CL:0000218,2.63e-07,2;CL:0000692,2.63e-07,2;CL:0002377,2.63e-07,2;CL:0002375,2.63e-07,2;CL:0002611,7.20e-07,2|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004121!9.00e-14!102;UBERON:0000924!9.00e-14!102;UBERON:0006601!9.00e-14!102;UBERON:0000073!4.54e-11!75;UBERON:0001016!4.54e-11!75;UBERON:0000970!5.29e-10!9;UBERON:0000019!5.29e-10!9;UBERON:0000047!5.29e-10!9;UBERON:0004088!5.29e-10!9;UBERON:0002104!5.29e-10!9;UBERON:0001456!5.29e-10!9;UBERON:0003072!5.29e-10!9;UBERON:0003071!5.29e-10!9;UBERON:0004128!5.29e-10!9;UBERON:0001017!6.91e-10!73;UBERON:0005743!6.91e-10!73;UBERON:0000033!6.94e-10!63;UBERON:0000020!4.43e-09!12;UBERON:0001032!4.43e-09!12;UBERON:0004456!4.43e-09!12;UBERON:0002346!4.49e-09!71;UBERON:0003075!4.49e-09!71;UBERON:0007284!4.49e-09!71;UBERON:0003056!1.35e-08!49;UBERON:0005085!4.68e-08!13;UBERON:0001444!1.60e-07!11|ontology_enrichment_uberon_v019_2=UBERON:0000970,1.48e-30,9;UBERON:0000019,1.48e-30,9;UBERON:0000047,1.48e-30,9;UBERON:0010312,1.48e-30,9;UBERON:0004088,1.48e-30,9;UBERON:0002104,1.48e-30,9;UBERON:0001456,1.48e-30,9;UBERON:0003072,1.48e-30,9;UBERON:0004128,1.48e-30,9;UBERON:0003071,1.48e-30,9;UBERON:0001444,1.03e-24,11;UBERON:0000020,1.60e-22,12;UBERON:0001032,1.60e-22,12;UBERON:0004456,1.60e-22,12;UBERON:0000033,1.15e-20,13;UBERON:0005085,1.15e-20,13;UBERON:0004121,1.02e-18,95;UBERON:0000924,1.02e-18,95;UBERON:0006601,1.02e-18,95;UBERON:0002346,7.76e-15,64;UBERON:0003075,7.76e-15,64;UBERON:0007284,7.76e-15,64;UBERON:0010371,1.57e-12,73;UBERON:0003056,2.21e-12,49;UBERON:0010314,3.85e-09,92;UBERON:0001016,1.27e-08,75;UBERON:0002256,7.20e-07,2|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.367093504323363,1.56478268869608,1.96222640742402,1.5378032791413,0.58328969722285,1.39986421625363,4.31257693094915,0,0,0,0,0,0,0.202316460859598,0,0,2.03306719241479,0,0,0,0.7104801149461,0.599200221036809,1.92109152660777,0.103689612308478,0,0,1.42825492201902,1.32521124570968,0,0,0,0,0,0.153606533256243,0.131886287730194,0.182975287204819,0.52091337055676,0,0,0,0,0.427115042397309,0.186399445825301,1.36307147999731,4.60986516651392,0,0,0,0,0,0,0.140444420131752,0.170430322578058,0,0,0.281686839553361,0,0,0,0,0,0.505524445014783,0,0,0,0,0,0,0,0,0,0.247194967734374,0,0,0,0.220841518460394,0,0,0,0.209446706813455,0,0,0,0,0,0,0.125654352112864,0.173824320192276,0,0,0,0,0.124406970610093,0,3.57751155007006,5.20481771850815,15.8632452059096,15.3052810334547,15.9747106905858,15.7844678031081,13.9643955110486,12.1812241927647,17.3331258395141,0,0,0,0.219195732427575,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0,0,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0,0.898819408654221,0,0,0,0,0,0,0.193952487167626,0,0.0632365371242573,0,0,0,0,0,0.196558995113203,0,0.608580364165509,0.241177159752417,0.763877555344259,0,0.162135226775035,0,0,0,0,0,0,0,0,0,0.325929952884052,0,0.938760993154008,0.167506257441816,0,0,0.315270288212382,0.8858587585951,0.318909537314974,0,0,0,0,0,0,0,0.160550589987792,0.117211686592203,0,0.252470927204373,0,0,0.215423397732799,1.43381278771531,0.445597348164788,1.41538265394416,0.404810701674894,0.292255857911312,0,0.321321316421807,0,0,0,0,0,0.242780636154981,0,0,0,0,0,0,0,0,0,0,0,1.26042765821917,0.258717367565509,0.428674070063185,0.177340233642274,0.713475270408282,0.329098041204242,0,0,0.21183207086382,0,0,0,0.0603129249281559,0,0.656563598980245,0,0.18542530201051,0.170870880797853,0.206386867963223,0.185194527369712,0.188368457004691,0,0.457556346413045,0,0,0,0,0,0,0.108005340821801,0,0,0,0.165306911450672,0,0,0,0,0.149516546043979,0.165458490457098,0,0,0,0.117357238645754,0.13020438484395,0,0,0,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179427713218951,0.167884616364078,0,0.187682475451182,0,0.214368379079066,0,1.6942555278512,1.84130094602871,1.71868654031819,0.171853182343688,0,0.755393897389701,1.35004500046361,0,0.906284817968409,0,0.207574695168353,0,0.170733605754134,0,0,0,0.44449345560323,0.206035057238894,0,0.252697211763798,0.760437899670719,0,0.280924522409647,0.320125762024346,0.229741875822453,0,0,0,0,0,0,0.532427418478012,0.476872379894642,0.436039249896986,0.470546902076653,0.169229215783353,0,0.526139422875686,0.271608227691724,0,0.474540072496697,0.197008964751127,0.818462086339379,0.619747364743864,0,1.24905288968973,0.233931608445408,0.214871054048298,0,0.220591419119515,0.463735671240843|short_description=p2@Tmem40}}
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=94346
|HGNC=
|MCL_coexpression_id=57
|TSSclassifier=NA
|UniProt=Q4FJU9,E9Q6I9
|association_with_transcript=85bp_to_ENSMUST00000166254,ENSMUST00000170625,NM_001168256,NM_001168257,uc012eqn.1,uc012eqo.1_5end
|cluster_id=chr6:115712364..115712398,-
|description=CAGE_peak_2_at_Tmem40_5end
|id=chr6:115712364..115712398,-
|ontology_enrichment_celltype=CL:0000333!1.97e-09!10;CL:0000095!1.97e-09!10;CL:0000243!1.97e-09!10;CL:0000123!1.97e-09!10;CL:0000125!1.97e-09!10;CL:0000030!1.97e-09!10;CL:0000339!1.97e-09!10;CL:0002453!9.29e-08!8;CL:0000221!3.36e-07!44;CL:0000133!3.36e-07!44;CL:0002319!7.91e-07!43
|ontology_enrichment_celltype_v019_2=CL:0000333,2.50e-19,10;CL:0000095,2.50e-19,10;CL:0000243,2.50e-19,10;CL:0000123,2.50e-19,10;CL:0000125,2.50e-19,10;CL:0000030,2.50e-19,10;CL:0000339,2.50e-19,10;CL:0002453,6.49e-14,8;CL:0000128,3.86e-13,6;CL:0000126,3.86e-13,6;CL:0000127,3.86e-13,6;CL:0002319,3.10e-08,43;CL:0000221,5.36e-08,44;CL:0000133,5.36e-08,44;CL:0002603,2.27e-07,2;CL:0000217,2.63e-07,2;CL:0000328,2.63e-07,2;CL:0002573,2.63e-07,2;CL:0002376,2.63e-07,2;CL:0000218,2.63e-07,2;CL:0000692,2.63e-07,2;CL:0002377,2.63e-07,2;CL:0002375,2.63e-07,2;CL:0002611,7.20e-07,2
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004121!9.00e-14!102;UBERON:0000924!9.00e-14!102;UBERON:0006601!9.00e-14!102;UBERON:0000073!4.54e-11!75;UBERON:0001016!4.54e-11!75;UBERON:0000970!5.29e-10!9;UBERON:0000019!5.29e-10!9;UBERON:0000047!5.29e-10!9;UBERON:0004088!5.29e-10!9;UBERON:0002104!5.29e-10!9;UBERON:0001456!5.29e-10!9;UBERON:0003072!5.29e-10!9;UBERON:0003071!5.29e-10!9;UBERON:0004128!5.29e-10!9;UBERON:0001017!6.91e-10!73;UBERON:0005743!6.91e-10!73;UBERON:0000033!6.94e-10!63;UBERON:0000020!4.43e-09!12;UBERON:0001032!4.43e-09!12;UBERON:0004456!4.43e-09!12;UBERON:0002346!4.49e-09!71;UBERON:0003075!4.49e-09!71;UBERON:0007284!4.49e-09!71;UBERON:0003056!1.35e-08!49;UBERON:0005085!4.68e-08!13;UBERON:0001444!1.60e-07!11
|ontology_enrichment_uberon_v019_2=UBERON:0000970,1.48e-30,9;UBERON:0000019,1.48e-30,9;UBERON:0000047,1.48e-30,9;UBERON:0010312,1.48e-30,9;UBERON:0004088,1.48e-30,9;UBERON:0002104,1.48e-30,9;UBERON:0001456,1.48e-30,9;UBERON:0003072,1.48e-30,9;UBERON:0004128,1.48e-30,9;UBERON:0003071,1.48e-30,9;UBERON:0001444,1.03e-24,11;UBERON:0000020,1.60e-22,12;UBERON:0001032,1.60e-22,12;UBERON:0004456,1.60e-22,12;UBERON:0000033,1.15e-20,13;UBERON:0005085,1.15e-20,13;UBERON:0004121,1.02e-18,95;UBERON:0000924,1.02e-18,95;UBERON:0006601,1.02e-18,95;UBERON:0002346,7.76e-15,64;UBERON:0003075,7.76e-15,64;UBERON:0007284,7.76e-15,64;UBERON:0010371,1.57e-12,73;UBERON:0003056,2.21e-12,49;UBERON:0010314,3.85e-09,92;UBERON:0001016,1.27e-08,75;UBERON:0002256,7.20e-07,2
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.367093504323363,1.56478268869608,1.96222640742402,1.5378032791413,0.58328969722285,1.39986421625363,4.31257693094915,0,0,0,0,0,0,0.202316460859598,0,0,2.03306719241479,0,0,0,0.7104801149461,0.599200221036809,1.92109152660777,0.103689612308478,0,0,1.42825492201902,1.32521124570968,0,0,0,0,0,0.153606533256243,0.131886287730194,0.182975287204819,0.52091337055676,0,0,0,0,0.427115042397309,0.186399445825301,1.36307147999731,4.60986516651392,0,0,0,0,0,0,0.140444420131752,0.170430322578058,0,0,0.281686839553361,0,0,0,0,0,0.505524445014783,0,0,0,0,0,0,0,0,0,0.247194967734374,0,0,0,0.220841518460394,0,0,0,0.209446706813455,0,0,0,0,0,0,0.125654352112864,0.173824320192276,0,0,0,0,0.124406970610093,0,3.57751155007006,5.20481771850815,15.8632452059096,15.3052810334547,15.9747106905858,15.7844678031081,13.9643955110486,12.1812241927647,17.3331258395141,0,0,0,0.219195732427575,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0,0,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0,0.898819408654221,0,0,0,0,0,0,0.193952487167626,0,0.0632365371242573,0,0,0,0,0,0.196558995113203,0,0.608580364165509,0.241177159752417,0.763877555344259,0,0.162135226775035,0,0,0,0,0,0,0,0,0,0.325929952884052,0,0.938760993154008,0.167506257441816,0,0,0.315270288212382,0.8858587585951,0.318909537314974,0,0,0,0,0,0,0,0.160550589987792,0.117211686592203,0,0.252470927204373,0,0,0.215423397732799,1.43381278771531,0.445597348164788,1.41538265394416,0.404810701674894,0.292255857911312,0,0.321321316421807,0,0,0,0,0,0.242780636154981,0,0,0,0,0,0,0,0,0,0,0,1.26042765821917,0.258717367565509,0.428674070063185,0.177340233642274,0.713475270408282,0.329098041204242,0,0,0.21183207086382,0,0,0,0.0603129249281559,0,0.656563598980245,0,0.18542530201051,0.170870880797853,0.206386867963223,0.185194527369712,0.188368457004691,0,0.457556346413045,0,0,0,0,0,0,0.108005340821801,0,0,0,0.165306911450672,0,0,0,0,0.149516546043979,0.165458490457098,0,0,0,0.117357238645754,0.13020438484395,0,0,0,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179427713218951,0.167884616364078,0,0.187682475451182,0,0.214368379079066,0,1.6942555278512,1.84130094602871,1.71868654031819,0.171853182343688,0,0.755393897389701,1.35004500046361,0,0.906284817968409,0,0.207574695168353,0,0.170733605754134,0,0,0,0.44449345560323,0.206035057238894,0,0.252697211763798,0.760437899670719,0,0.280924522409647,0.320125762024346,0.229741875822453,0,0,0,0,0,0,0.532427418478012,0.476872379894642,0.436039249896986,0.470546902076653,0.169229215783353,0,0.526139422875686,0.271608227691724,0,0.474540072496697,0.197008964751127,0.818462086339379,0.619747364743864,0,1.24905288968973,0.233931608445408,0.214871054048298,0,0.220591419119515,0.463735671240843
|short_description=p2@Tmem40
}}

Latest revision as of 12:06, 26 September 2015

Short description:p2@Tmem40
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Tmem40_5end
Coexpression cluster:MCL_coexpression_mm9:57
Association with transcript: 85bp_to_ENSMUST00000166254, ENSMUST00000170625, NM_001168256, NM_001168257, uc012eqn.1, uc012eqo.1_5end
EntrezGene:Tmem40
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Tmem40

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.16
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.37
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B71.56
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.96
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B81.54
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.58
Mouse Astrocytes, donor2.CNhs12078.11552-120C41.40
Mouse Astrocytes, donor3.CNhs12107.11633-122C44.31
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.20
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C62.03
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.71
Mouse Microglia, donor1.CNhs12629.11718-123C80.60
Mouse Microglia, donor2.CNhs12634.11736-123E81.92
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.10
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F11.43
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.33
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.00
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.15
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.13
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.18
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.52
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.00
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.43
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.19
Mouse Schwann, donor1.CNhs12507.11728-123D91.36
Mouse Schwann, donor2.CNhs12573.11746-123F94.61
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.14
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.17
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.28
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.51
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.00
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.00
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.25
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.21
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A40.00
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.13
cortex, adult.CNhs10473.12-14D50.17
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F20.00
diencephalon, neonate N30.CNhs11201.1388-42B20.00
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.12
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G43.58
eyeball, embryo E12.CNhs11016.345-16C65.20
eyeball, embryo E14.CNhs10521.399-16E215.86
eyeball, embryo E15.CNhs10593.426-16C915.31
eyeball, embryo E17.CNhs11023.1261-18D415.97
eyeball, neonate N00.CNhs11207.633-15C615.78
eyeball, neonate N01.CNhs11140.1532-43E713.96
eyeball, neonate N02.CNhs11205.1551-44G812.18
eyeball, neonate N16.CNhs11188.777-19A217.33
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.20
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E80.00
hippocampus, neonate N00.CNhs11228.627-43G10.10
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.00
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.00
kidney, neonate N10.CNhs11206.758-6D50.06
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.61
liver, embryo E16.CNhs10523.462-17F50.24
liver, embryo E17.CNhs10510.481-18A30.76
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.16
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.33
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.94
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.32
lung, neonate N07.CNhs11111.715-19A30.89
lung, neonate N10.CNhs11219.750-23E60.32
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C20.16
medulla oblongata, neonate N30.CNhs11200.1396-42A30.12
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.22
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D71.43
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.45
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.42
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.32
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E61.26
pituitary gland, embryo E13.CNhs11009.370-44C70.26
pituitary gland, embryo E14.CNhs11037.398-44A50.43
pituitary gland, embryo E15.CNhs10592.427-16B90.18
pituitary gland, embryo E16.CNhs11036.449-43F60.71
pituitary gland, embryo E17.CNhs11039.1265-44F50.33
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.21
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.06
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.66
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C90.19
spleen, adult.CNhs10465.25-2G20.17
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.46
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.11
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.17
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.15
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.12
testis, neonate N07.CNhs11222.726-26I40.13
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.10
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.18
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.17
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.19
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11.69
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A21.84
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31.72
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.17
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.76
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A61.35
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.91
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.21
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.17
whole body, embryo E14.5.CNhs10578.420-27D20.00
whole body, embryo E14.CNhs10519.395-14B10.00
whole body, embryo E16.CNhs10514.453-14F20.00
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.21
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.28
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.23
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.17
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.27
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.20
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.62
whole body, embryo E17.5.CNhs10513.490-9F90.00
whole body, embryo E17.CNhs10517.475-3I51.25
whole body, embryo E18.CNhs10516.493-3B30.23
whole body, neonate N00.CNhs10525.657-19C20.21
whole body, neonate N01.CNhs10576.659-23C60.00
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.46





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
eye1.48e-309
camera-type eye1.48e-309
simple eye1.48e-309
immature eye1.48e-309
ocular region1.48e-309
visual system1.48e-309
face1.48e-309
optic cup1.48e-309
optic vesicle1.48e-309
eye primordium1.48e-309
subdivision of head1.03e-2411
sense organ1.60e-2212
sensory system1.60e-2212
entire sense organ system1.60e-2212
head1.15e-2013
ectodermal placode1.15e-2013
ectoderm-derived structure1.02e-1895
ectoderm1.02e-1895
presumptive ectoderm1.02e-1895
neurectoderm7.76e-1564
neural plate7.76e-1564
presumptive neural plate7.76e-1564
ecto-epithelium1.57e-1273
pre-chordal neural plate2.21e-1249
structure with developmental contribution from neural crest3.85e-0992
nervous system1.27e-0875
dorsal horn of spinal cord7.20e-072
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