FFCP PHASE1:Mm9::chr17:45570660..45570694,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr17:45570660..45570694,-
|short_description=p1@Cdc5l
|description=CAGE_peak_1_at_Cdc5l_5end
|association_with_transcript=-4bp_to_ENSMUST00000024727,NM_152810,...") |
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(7 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=71702 | |EntrezGene=71702 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=Q6A068,Q3UCF2 | |UniProt=Q6A068,Q3UCF2 | ||
|association_with_transcript=-4bp_to_ENSMUST00000024727,NM_152810,uc008cqj.1,uc008cqk.1_5end | |||
|cluster_id=chr17:45570660..45570694,- | |||
|description=CAGE_peak_1_at_Cdc5l_5end | |||
|id=chr17:45570660..45570694,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001048!4.41e-13!147;UBERON:0000926!1.60e-10!193;UBERON:0004120!1.60e-10!193;UBERON:0006603!1.60e-10!193;UBERON:0003081!2.06e-09!88;UBERON:0004177!2.75e-08!29;UBERON:0007100!6.58e-07!18;UBERON:0000948!6.58e-07!18;UBERON:0005498!6.58e-07!18;UBERON:0004140!6.58e-07!18;UBERON:0009881!6.58e-07!18;UBERON:0004141!6.58e-07!18;UBERON:0003084!6.58e-07!18;UBERON:0007005!6.58e-07!18;UBERON:0004139!6.58e-07!18;UBERON:0004291!6.58e-07!18 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001048,1.23e-13,134;UBERON:0000926,3.12e-10,120;UBERON:0004120,3.12e-10,120;UBERON:0006603,3.12e-10,120;UBERON:0003081,5.96e-09,87;UBERON:0004177,2.59e-08,29;UBERON:0005057,2.59e-08,29;UBERON:0007811,5.92e-08,36;UBERON:0000153,9.46e-08,43;UBERON:0000077,1.26e-07,35;UBERON:0007100,6.58e-07,18;UBERON:0000948,6.58e-07,18;UBERON:0005498,6.58e-07,18;UBERON:0004140,6.58e-07,18;UBERON:0009881,6.58e-07,18;UBERON:0004141,6.58e-07,18;UBERON:0003084,6.58e-07,18;UBERON:0007005,6.58e-07,18;UBERON:0004139,6.58e-07,18;UBERON:0004291,6.58e-07,18 | |||
|phase1_expression=6.56610273129655,2.44282785347553,0.909998478779072,1.51232105653415,1.00179145989269,3.86122325397347,3.03696432774183,5.4231795845462,7.74337971834167,11.0010327371337,4.62288514208863,7.8974437405383,9.92964233600993,6.55653018142481,6.99530499812892,10.3262386368811,10.4934281719222,7.5710919685977,8.22686601634433,8.48779303596061,3.14660173558958,4.56738375524072,2.61199789138935,2.23989391910769,4.35877634027623,1.72269589234506,2.15380998079537,3.01659725760245,1.71021077510736,2.26827116783938,2.21730510655305,1.90509202037889,3.07532393792285,0,2.88851619751275,2.49351968037739,1.63335485009895,7.11503772252743,6.2506827561904,6.80580867165938,5.29408339227913,7.5135003345429,4.85510353031154,3.9028013572429,4.46058497365864,3.85448179539531,0,1.30815093828268,0.219686182734472,1.36100929351998,2.09979632438044,2.87505128729943,7.21465206048266,2.90144856804538,5.71359458542189,5.14518872071894,8.02293631828519,3.09403255366465,2.22548106945558,2.11596391708813,3.1691570175309,2.37191172448392,0,0.449949858640699,1.97773272513395,0,1.19840044207362,0.768436610643109,3.11068836925433,3.91517221161903,2.73422449756797,2.85650984403804,0.441737081903227,3.30725157880376,3.73797336971122,4.5960939330501,0,3.57524546638526,1.84327839907492,0.923204014111357,3.11057988248193,4.16730696445408,1.95428099300967,2.8138130501584,3.36156145108982,2.94628585473668,3.27454865837937,2.05039390407831,2.80186915332781,4.00529268565963,8.69593466105033,1.72084775396277,0,3.2382191498269,5.19821133958135,1.34408066129201,5.47733238513832,6.64678258054425,3.11743205523443,1.7666978725517,6.4787973097273,3.84979432242953,0,0,3.030874574157,3.54703811665138,3.53867111510348,3.88225191044804,15.5362730188303,4.60170631100957,7.28638372417771,6.39377504455497,5.99600292865752,5.72746034099966,5.40908052824242,4.14699751387929,4.20231445148436,5.78397427679647,14.153768831198,4.36770494858005,7.28777010919299,9.21262980956922,3.72783522436244,6.14839673724249,4.81727425670947,3.0654846625031,4.07371423320129,1.79970819298022,2.41433431438823,7.48953197024113,5.03250663100489,5.40313714085317,5.04090528557602,6.90431734791892,5.194701113989,5.353961681236,3.86989582631202,5.97153458928446,2.77995034277042,6.94458124425364,8.84819012146385,6.66716102857071,8.10279584124071,9.64510834148576,6.46346741937615,7.17436833595159,8.05834831213668,6.20888089773638,3.44908788692548,4.53854592402766,5.63043597324636,6.1374805079721,6.39508673218875,8.00979983000983,7.40815691068596,5.9710280045548,2.80885274925294,3.60287069960601,2.27330799516474,7.87077935634907,11.9608290590359,9.18316513451176,9.70653415899362,9.24791889212798,10.6444307892291,9.30135779001631,10.1943892531855,7.12268588439734,10.3672705445493,9.85004784474571,7.21512404958116,8.62579925809461,7.46470391989572,8.18659154438268,5.67782861123144,5.45394445610208,1.65209391491899,2.64450566663544,6.18535926552179,5.57368012465052,6.05677068213839,6.05050573870028,7.56085349072559,5.1360919050391,1.89811624617805,3.95277491337626,4.27269854960458,5.96869416123452,4.874102177978,3.59527763461689,3.24207074812041,3.38540164532424,3.41402221715547,6.740662243974,9.01661885384643,8.96065842519383,7.95205197387266,3.92760591385784,5.05892296994058,5.01874503130647,5.65195420228949,3.82531208157582,3.55743152504579,6.84064933435986,8.64859578498093,8.54476027062444,8.11440485554012,8.92355491083942,7.38414970166117,6.90470729881945,5.67473293712624,5.21666685057355,12.9391385874619,3.72140947668503,6.55279113540577,3.78868316920668,3.04975602987251,3.37710464954357,8.68339993783042,5.11626811780309,6.51859905768104,5.43184274480602,4.92849521405854,7.03526281255626,6.42717830392237,4.68320754858717,8.35466263762812,8.19419351700467,5.26200736569707,5.89907932976657,9.32498902075836,4.91806799177139,10.5553898757491,2.71952841909355,6.39293554924747,4.41498794087572,3.53211297973142,4.45404409050372,4.91804836130026,4.54447668967871,4.10160685241134,4.29482618726302,5.38558494331997,7.16906393857656,8.02075226696619,7.07691326972081,6.07216052512342,3.50707029493574,3.95287777946523,8.03303291054518,5.96148357874728,6.41036173202119,5.37526965866801,4.78413356620353,6.63725691699814,7.52619972080442,7.55808892411878,5.65815239267694,1.77181135728464,3.68922177532713,5.16856586336442,5.81653967164009,5.70395805415554,5.05658812697306,1.05418608574999,3.09406629744561,4.42571487479924,7.92268813737765,3.62204314591713,4.92975180572662,4.07882537377229,5.88617098086833,6.08831376227848,3.34911444026059,4.22409074514679,2.75381692122966,7.05690873775878,8.73897140589844,9.20347232166662,6.57410881716899,5.37175548014114,3.44695889464629,4.95517422270746,3.33765543618917,6.1513517087227,6.3979929068599,7.22258656741876,9.79515976424393,13.2593400889394,11.2101304871196,3.0596117398894,3.77868921273877,2.62579950228405,4.77335309007557,7.11755985557555,6.30290348093231,6.80433647177348,7.3180903605064,4.80397640241591,5.39457385539283,4.29797969771747,4.4498510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| |phase1_expression=6.56610273129655,2.44282785347553,0.909998478779072,1.51232105653415,1.00179145989269,3.86122325397347,3.03696432774183,5.4231795845462,7.74337971834167,11.0010327371337,4.62288514208863,7.8974437405383,9.92964233600993,6.55653018142481,6.99530499812892,10.3262386368811,10.4934281719222,7.5710919685977,8.22686601634433,8.48779303596061,3.14660173558958,4.56738375524072,2.61199789138935,2.23989391910769,4.35877634027623,1.72269589234506,2.15380998079537,3.01659725760245,1.71021077510736,2.26827116783938,2.21730510655305,1.90509202037889,3.07532393792285,0,2.88851619751275,2.49351968037739,1.63335485009895,7.11503772252743,6.2506827561904,6.80580867165938,5.29408339227913,7.5135003345429,4.85510353031154,3.9028013572429,4.46058497365864,3.85448179539531,0,1.30815093828268,0.219686182734472,1.36100929351998,2.09979632438044,2.87505128729943,7.21465206048266,2.90144856804538,5.71359458542189,5.14518872071894,8.02293631828519,3.09403255366465,2.22548106945558,2.11596391708813,3.1691570175309,2.37191172448392,0,0.449949858640699,1.97773272513395,0,1.19840044207362,0.768436610643109,3.11068836925433,3.91517221161903,2.73422449756797,2.85650984403804,0.441737081903227,3.30725157880376,3.73797336971122,4.5960939330501,0,3.57524546638526,1.84327839907492,0.923204014111357,3.11057988248193,4.16730696445408,1.95428099300967,2.8138130501584,3.36156145108982,2.94628585473668,3.27454865837937,2.05039390407831,2.80186915332781,4.00529268565963,8.69593466105033,1.72084775396277,0,3.2382191498269,5.19821133958135,1.34408066129201,5.47733238513832,6.64678258054425,3.11743205523443,1.7666978725517,6.4787973097273,3.84979432242953,0,0,3.030874574157,3.54703811665138,3.53867111510348,3.88225191044804,15.5362730188303,4.60170631100957,7.28638372417771,6.39377504455497,5.99600292865752,5.72746034099966,5.40908052824242,4.14699751387929,4.20231445148436,5.78397427679647,14.153768831198,4.36770494858005,7.28777010919299,9.21262980956922,3.72783522436244,6.14839673724249,4.81727425670947,3.0654846625031,4.07371423320129,1.79970819298022,2.41433431438823,7.48953197024113,5.03250663100489,5.40313714085317,5.04090528557602,6.90431734791892,5.194701113989,5.353961681236,3.86989582631202,5.97153458928446,2.77995034277042,6.94458124425364,8.84819012146385,6.66716102857071,8.10279584124071,9.64510834148576,6.46346741937615,7.17436833595159,8.05834831213668,6.20888089773638,3.44908788692548,4.53854592402766,5.63043597324636,6.1374805079721,6.39508673218875,8.00979983000983,7.40815691068596,5.9710280045548,2.80885274925294,3.60287069960601,2.27330799516474,7.87077935634907,11.9608290590359,9.18316513451176,9.70653415899362,9.24791889212798,10.6444307892291,9.30135779001631,10.1943892531855,7.12268588439734,10.3672705445493,9.85004784474571,7.21512404958116,8.62579925809461,7.46470391989572,8.18659154438268,5.67782861123144,5.45394445610208,1.65209391491899,2.64450566663544,6.18535926552179,5.57368012465052,6.05677068213839,6.05050573870028,7.56085349072559,5.1360919050391,1.89811624617805,3.95277491337626,4.27269854960458,5.96869416123452,4.874102177978,3.59527763461689,3.24207074812041,3.38540164532424,3.41402221715547,6.740662243974,9.01661885384643,8.96065842519383,7.95205197387266,3.92760591385784,5.05892296994058,5.01874503130647,5.65195420228949,3.82531208157582,3.55743152504579,6.84064933435986,8.64859578498093,8.54476027062444,8.11440485554012,8.92355491083942,7.38414970166117,6.90470729881945,5.67473293712624,5.21666685057355,12.9391385874619,3.72140947668503,6.55279113540577,3.78868316920668,3.04975602987251,3.37710464954357,8.68339993783042,5.11626811780309,6.51859905768104,5.43184274480602,4.92849521405854,7.03526281255626,6.42717830392237,4.68320754858717,8.35466263762812,8.19419351700467,5.26200736569707,5.89907932976657,9.32498902075836,4.91806799177139,10.5553898757491,2.71952841909355,6.39293554924747,4.41498794087572,3.53211297973142,4.45404409050372,4.91804836130026,4.54447668967871,4.10160685241134,4.29482618726302,5.38558494331997,7.16906393857656,8.02075226696619,7.07691326972081,6.07216052512342,3.50707029493574,3.95287777946523,8.03303291054518,5.96148357874728,6.41036173202119,5.37526965866801,4.78413356620353,6.63725691699814,7.52619972080442,7.55808892411878,5.65815239267694,1.77181135728464,3.68922177532713,5.16856586336442,5.81653967164009,5.70395805415554,5.05658812697306,1.05418608574999,3.09406629744561,4.42571487479924,7.92268813737765,3.62204314591713,4.92975180572662,4.07882537377229,5.88617098086833,6.08831376227848,3.34911444026059,4.22409074514679,2.75381692122966,7.05690873775878,8.73897140589844,9.20347232166662,6.57410881716899,5.37175548014114,3.44695889464629,4.95517422270746,3.33765543618917,6.1513517087227,6.3979929068599,7.22258656741876,9.79515976424393,13.2593400889394,11.2101304871196,3.0596117398894,3.77868921273877,2.62579950228405,4.77335309007557,7.11755985557555,6.30290348093231,6.80433647177348,7.3180903605064,4.80397640241591,5.39457385539283,4.29797969771747,4.4498510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| ||
|short_description=p1@Cdc5l | |||
}} | }} |
Latest revision as of 12:47, 26 September 2015
Short description: | p1@Cdc5l |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Cdc5l_5end |
Coexpression cluster: | NA |
Association with transcript: | -4bp_to_ENSMUST00000024727, NM_152810, uc008cqj.1, uc008cqk.1_5end |
EntrezGene: | Cdc5l |
Link to Zenbu: | ZENBU |
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CAGE Expression
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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
primordium | 1.23e-13 | 134 |
mesoderm | 3.12e-10 | 120 |
mesoderm-derived structure | 3.12e-10 | 120 |
presumptive mesoderm | 3.12e-10 | 120 |
lateral plate mesoderm | 5.96e-09 | 87 |
hemopoietic organ | 2.59e-08 | 29 |
immune organ | 2.59e-08 | 29 |
craniocervical region | 5.92e-08 | 36 |
anterior region of body | 9.46e-08 | 43 |
mixed endoderm/mesoderm-derived structure | 1.26e-07 | 35 |
primary circulatory organ | 6.58e-07 | 18 |
heart | 6.58e-07 | 18 |
primitive heart tube | 6.58e-07 | 18 |
primary heart field | 6.58e-07 | 18 |
anterior lateral plate mesoderm | 6.58e-07 | 18 |
heart tube | 6.58e-07 | 18 |
heart primordium | 6.58e-07 | 18 |
cardiac mesoderm | 6.58e-07 | 18 |
cardiogenic plate | 6.58e-07 | 18 |
heart rudiment | 6.58e-07 | 18 |