FFCP PHASE1:Mm9::chr17:47147523..47147541,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr17:47147523..47147541,-
|short_description=p2@Ubr2
|description=CAGE_peak_2_at_Ubr2_5end
|association_with_transcript=-42bp_to_ENSMUST00000113335,ENSMUST0000...") |
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(7 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=224826 | |EntrezGene=224826 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=Q6WKZ8,Q3UPU3 | |UniProt=Q6WKZ8,Q3UPU3 | ||
|association_with_transcript=-42bp_to_ENSMUST00000113335,ENSMUST00000113337,NM_001177374,NM_146078,uc008cup.2,uc012aus.1,uc012aut.1,uc012auu.1_5end | |||
|cluster_id=chr17:47147523..47147541,- | |||
|description=CAGE_peak_2_at_Ubr2_5end | |||
|id=chr17:47147523..47147541,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007811!6.52e-12!86;UBERON:0000153!3.94e-11!94;UBERON:0004177!1.36e-08!29;UBERON:0002370!1.71e-08!23;UBERON:0000974!1.71e-08!23;UBERON:0004807!1.71e-08!23;UBERON:0005058!1.71e-08!23;UBERON:0003351!1.71e-08!23;UBERON:0009113!1.71e-08!23;UBERON:0003295!1.71e-08!23;UBERON:0009722!1.71e-08!23;UBERON:0005562!1.71e-08!23;UBERON:0007690!1.71e-08!23;UBERON:0003408!2.78e-08!24;UBERON:0006562!5.41e-08!24;UBERON:0001557!5.41e-08!24;UBERON:0001042!5.41e-08!24;UBERON:0008814!5.41e-08!24;UBERON:0009145!5.41e-08!24;UBERON:0000475!1.35e-07!200 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000077,3.32e-10,35;UBERON:0004177,1.36e-08,29;UBERON:0005057,1.36e-08,29;UBERON:0002370,1.70e-08,23;UBERON:0000974,1.70e-08,23;UBERON:0004807,1.70e-08,23;UBERON:0005058,1.70e-08,23;UBERON:0003351,1.70e-08,23;UBERON:0009113,1.70e-08,23;UBERON:0003295,1.70e-08,23;UBERON:0009722,1.70e-08,23;UBERON:0005562,1.70e-08,23;UBERON:0007690,1.70e-08,23;UBERON:0003408,2.77e-08,24;UBERON:0006562,5.39e-08,24;UBERON:0001557,5.39e-08,24;UBERON:0001042,5.39e-08,24;UBERON:0008814,5.39e-08,24;UBERON:0009145,5.39e-08,24;UBERON:0007811,6.42e-08,36;UBERON:0000153,3.47e-07,43 | |||
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| ||
|short_description=p2@Ubr2 | |||
}} | }} |
Latest revision as of 14:05, 26 September 2015
Short description: | p2@Ubr2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Ubr2_5end |
Coexpression cluster: | NA |
Association with transcript: | -42bp_to_ENSMUST00000113335, ENSMUST00000113337, NM_001177374, NM_146078, uc008cup.2, uc012aus.1, uc012aut.1, uc012auu.1_5end |
EntrezGene: | Ubr2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mixed endoderm/mesoderm-derived structure | 3.32e-10 | 35 |
hemopoietic organ | 1.36e-08 | 29 |
immune organ | 1.36e-08 | 29 |
thymus | 1.70e-08 | 23 |
neck | 1.70e-08 | 23 |
respiratory system epithelium | 1.70e-08 | 23 |
hemolymphoid system gland | 1.70e-08 | 23 |
pharyngeal epithelium | 1.70e-08 | 23 |
thymic region | 1.70e-08 | 23 |
pharyngeal gland | 1.70e-08 | 23 |
entire pharyngeal arch endoderm | 1.70e-08 | 23 |
thymus primordium | 1.70e-08 | 23 |
early pharyngeal endoderm | 1.70e-08 | 23 |
gland of gut | 2.77e-08 | 24 |
pharynx | 5.39e-08 | 24 |
upper respiratory tract | 5.39e-08 | 24 |
chordate pharynx | 5.39e-08 | 24 |
pharyngeal arch system | 5.39e-08 | 24 |
pharyngeal region of foregut | 5.39e-08 | 24 |
craniocervical region | 6.42e-08 | 36 |
anterior region of body | 3.47e-07 | 43 |