FFCP PHASE1:Mm9::chr2:43410841..43410858,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=70789 | |EntrezGene=70789 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=8 | |MCL_coexpression_id=8 | ||
|TSSclassifier=NA | |||
|UniProt=A2ARD6,Q9CXF0,Q6NSV5,Q3V3G5 | |UniProt=A2ARD6,Q9CXF0,Q6NSV5,Q3V3G5 | ||
|association_with_transcript=0bp_to_ENSMUST00000028223,ENSMUST00000138540,NM_027552,uc008jos.1,uc008jot.1,uc012bvc.1_5end | |association_with_transcript=0bp_to_ENSMUST00000028223,ENSMUST00000138540,NM_027552,uc008jos.1,uc008jot.1,uc012bvc.1_5end | ||
|cluster_id=chr2:43410841..43410858,+ | |||
|description=CAGE_peak_1_at_Kynu_5end | |description=CAGE_peak_1_at_Kynu_5end | ||
|id=chr2:43410841..43410858,+ | |id=chr2:43410841..43410858,+ | ||
|ontology_enrichment_celltype=CL:0000414!1.83e-07!11 | |ontology_enrichment_celltype=CL:0000414!1.83e-07!11 | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005172!7.61e-15!49;UBERON:0005173!7.61e-15!49;UBERON:0002417!7.61e-15!49;UBERON:0000916!7.61e-15!49;UBERON:0002107!5.61e-13!22;UBERON:0007499!5.61e-13!22;UBERON:0006925!5.61e-13!22;UBERON:0009497!5.61e-13!22;UBERON:0000015!5.61e-13!22;UBERON:0002423!5.61e-13!22;UBERON:0006235!5.61e-13!22;UBERON:0008835!5.61e-13!22;UBERON:0003894!5.61e-13!22;UBERON:0004161!5.61e-13!22;UBERON:0008836!5.61e-13!22;UBERON:0002365!8.83e-13!25;UBERON:0002330!8.83e-13!25;UBERON:0009569!1.73e-12!66;UBERON:0001007!8.38e-12!128;UBERON:0001555!8.38e-12!128;UBERON:0007026!8.38e-12!128;UBERON:0002405!8.66e-12!70;UBERON:0009854!8.85e-12!23;UBERON:0009856!8.85e-12!23;UBERON:0004119!1.38e-11!130;UBERON:0000925!1.38e-11!130;UBERON:0006595!1.38e-11!130;UBERON:0004921!5.37e-11!126;UBERON:0004185!5.37e-11!126;UBERON:0005057!1.55e-10!51;UBERON:0005177!3.18e-10!85;UBERON:0001041!2.59e-09!92;UBERON:0003104!5.34e-09!131;UBERON:0009142!5.34e-09!131;UBERON:0000077!1.06e-08!97;UBERON:0002100!3.08e-07!98 | |ontology_enrichment_uberon=UBERON:0005172!7.61e-15!49;UBERON:0005173!7.61e-15!49;UBERON:0002417!7.61e-15!49;UBERON:0000916!7.61e-15!49;UBERON:0002107!5.61e-13!22;UBERON:0007499!5.61e-13!22;UBERON:0006925!5.61e-13!22;UBERON:0009497!5.61e-13!22;UBERON:0000015!5.61e-13!22;UBERON:0002423!5.61e-13!22;UBERON:0006235!5.61e-13!22;UBERON:0008835!5.61e-13!22;UBERON:0003894!5.61e-13!22;UBERON:0004161!5.61e-13!22;UBERON:0008836!5.61e-13!22;UBERON:0002365!8.83e-13!25;UBERON:0002330!8.83e-13!25;UBERON:0009569!1.73e-12!66;UBERON:0001007!8.38e-12!128;UBERON:0001555!8.38e-12!128;UBERON:0007026!8.38e-12!128;UBERON:0002405!8.66e-12!70;UBERON:0009854!8.85e-12!23;UBERON:0009856!8.85e-12!23;UBERON:0004119!1.38e-11!130;UBERON:0000925!1.38e-11!130;UBERON:0006595!1.38e-11!130;UBERON:0004921!5.37e-11!126;UBERON:0004185!5.37e-11!126;UBERON:0005057!1.55e-10!51;UBERON:0005177!3.18e-10!85;UBERON:0001041!2.59e-09!92;UBERON:0003104!5.34e-09!131;UBERON:0009142!5.34e-09!131;UBERON:0000077!1.06e-08!97;UBERON:0002100!3.08e-07!98 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0005172,4.08e-16,49;UBERON:0005173,4.08e-16,49;UBERON:0002417,4.08e-16,49;UBERON:0000916,4.08e-16,49;UBERON:0002107,1.98e-14,22;UBERON:0007499,1.98e-14,22;UBERON:0006925,1.98e-14,22;UBERON:0009497,1.98e-14,22;UBERON:0000015,1.98e-14,22;UBERON:0002423,1.98e-14,22;UBERON:0006235,1.98e-14,22;UBERON:0008835,1.98e-14,22;UBERON:0003894,1.98e-14,22;UBERON:0004161,1.98e-14,22;UBERON:0008836,1.98e-14,22;UBERON:0002365,1.06e-13,25;UBERON:0002330,1.06e-13,25;UBERON:0009854,2.19e-13,23;UBERON:0009856,2.19e-13,23;UBERON:0009569,8.52e-13,66;UBERON:0001007,5.42e-12,116;UBERON:0001555,5.42e-12,116;UBERON:0007026,5.42e-12,116;UBERON:0004119,6.67e-12,118;UBERON:0000925,6.67e-12,118;UBERON:0006595,6.67e-12,118;UBERON:0004921,4.53e-11,114;UBERON:0005177,6.32e-11,79;UBERON:0001041,2.99e-10,80;UBERON:0002100,1.33e-08,90;UBERON:0003929,3.55e-08,55;UBERON:0005911,1.26e-07,69;UBERON:0003104,2.38e-07,61;UBERON:0009142,2.38e-07,61;UBERON:0002368,5.46e-07,60 | |||
|phase1_expression=0,0.348975407639361,1.81999695755814,0,0.500895729946347,1.17515490338323,1.16806320297763,0,0,0,0,0,0,0.174840804837995,2.6648780945253,5.4668322195253,2.79824751251259,38.486384173705,44.2879620546536,31.4048342330542,5.27268398936633,0.397163804803541,0.522399578277871,4.47978783821539,4.12936705920906,1.14846392823004,3.01533397311352,1.939241094173,0,1.26015064879965,0.443461021310609,0,0,0,0,0,0,0.418531630736908,3.906676722619,1.0470474879476,0,0,0.485510353031154,0,0,0,0,0,0,0,0,0,25.3351735147182,0.725362142011344,0.336093799142464,0,0,0,0,0,0,0,0,0.899899717281399,1.97773272513395,0.7104801149461,0,0,0,0,0,0,0.220868540951614,0,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0,0,0,0,0,3.18850937571846,215.966393122328,24.478968013479,272.550111777098,330.736196480864,184.587077484102,45.7848809629511,0,0,0,0.14084341977668,0,0,0,0,0,0,61.8876628077305,38.3228067797814,1.03909497345377,0,1.21786191324856,0.691846491768175,0.452167921657868,1.88141931417128,1.38233250462643,3.70792451601561,0.86759614151947,0.884610551949874,0.323533699894818,1.10420759230197,0.484875253135222,0,0,0,1.53274233125155,0.838705871541442,0,0.635351135365324,0,0,0,0,0.255715457330331,0.20778804455956,0.162241263067758,0.101839363850316,1.24406970610093,0.252722758433675,0.631325567659422,0.650602214813519,0.229902104433473,0,0.753524089178575,0,0,0.281105173679186,0.258703370739016,0,0,0.527853372491847,0.219195732427575,0.556094498451196,0,0.205782136407943,0.398068533636986,0,0,0,0,0,0,0,0.393528463494808,0,0.232533944750408,0,0,0.16455984991348,0.164167464079095,0,0,0.439100230582101,0.268412837520744,0,0,1.65209391491899,1.58670339998127,0.853153002140936,1.85789337488351,3.35055399437443,3.02525286935014,2.00140239460383,4.1849637744763,0.949058123089023,1.97638745668813,1.00534083520108,1.39269530428806,1.16978452271472,2.69645822596266,2.16138049874694,1.99141273254367,0.379335801906163,3.31320686568214,0,6.10953983535943,3.68509725618489,3.43665517462561,7.96780367765642,20.0749801252259,20.2528358915373,17.3990001129739,100.200987955456,0.667380422864376,0.393117990226406,2.69834534861824,6.28866376304359,13.5059209461353,14.2590476997595,14.9601991474422,25.2930953769055,56.0105282903686,73.3217853289508,88.1974045974353,85.186284760275,97.242868009638,166.839594575378,416.831202457949,3.32555742299888,0,0.162964976442026,0.509235257325564,0.234690248288502,0.167506257441816,0.238043640886014,0.585400943573396,1.57635144106191,0.221464689648775,1.75400245523236,3.93271955317771,4.83517949224508,4.48412081602686,0,3.80733978673097,0.491764273019036,2.20749397043786,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0.178065603667255,0.651547837414304,0.329940245945071,0,3.15614827001476,3.02323556964751,0.943025398779491,0.295301892880773,0.614870295887855,1.55056975900933,0.727067458955011,1.42598951353889,0.948110273807448,0,1.03135543248187,0,0.36012218806262,0.388076051348264,0.857348140126369,0,0,0.164549020602121,0,1.40803024838226,0,0,0.8244312647074,0.161464426695906,0.180938774784468,0.238744688006273,0.328281799490123,3.78925087618806,0.556275906031529,8.03093139749908,1.23832120777933,1.11116716421827,4.33247451110789,6.28793447516716,8.46479240864134,1.5298058699447,2.09927178485487,2.21119958087078,0,0.158167996790568,1.01659733563424,1.18805874903981,0.209088296014469,2.83871332870031,5.39457385539283,7.85207829390691,0.26175594198403,0.648074866458964,1.24267862617385,0,0.149516546043979,0.330916980914195,0.194451188344048,0.258319646955462,0,0,1.3020438484395,0,0,0,2.8441000856536,0.405450430580328,1.33524244314275,2.33857481360031,1.07416017400489,1.39076948346885,1.32214994471966,1.77227432609493,2.72609414859999,1.37172251979,3.42809029465258,2.14407337627455,2.88635524920988,3.15567635890236,0,0,0,0,0.965947970160952,0.563047426353546,0.549454872801795,0.428736758158132,0,0.564751842617067,0,0.572895513439397,0.171853182343688,0,0,0,0,0,0,0.415149390336707,0.399024873401031,0.512200817262403,0.972426868273176,1.67690530102386,1.10306105070008,2.44471400581777,1.03017528619447,0.320919209591815,3.03236654116557,2.02783439912192,1.69763707247469,3.46473577638565,2.11283002936069,2.64203157195821,1.42888107384922,2.43357084484197,1.92909220463705,2.47251540481984,2.06078488188156,1.02860775715625,3.01708870470874,1.90748951957857,2.18019624948493,2.72917203204459,1.77690676572521,3.10977553883713,1.8414879800649,1.7654534799962,1.12228454331548,2.01679530811096,1.37906275325789,1.22769312950907,2.78886314134739,2.12197272079256,0,3.27504251823572,3.65280791882107,0,0.882365676478062,0 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|phase1_expression=0,0.348975407639361,1.81999695755814,0,0.500895729946347,1.17515490338323,1.16806320297763,0,0,0,0,0,0,0.174840804837995,2.6648780945253,5.4668322195253,2.79824751251259,38.486384173705,44.2879620546536,31.4048342330542,5.27268398936633,0.397163804803541,0.522399578277871,4.47978783821539,4.12936705920906,1.14846392823004,3.01533397311352,1.939241094173,0,1.26015064879965,0.443461021310609,0,0,0,0,0,0,0.418531630736908,3.906676722619,1.0470474879476,0,0,0.485510353031154,0,0,0,0,0,0,0,0,0,25.3351735147182,0.725362142011344,0.336093799142464,0,0,0,0,0,0,0,0,0.899899717281399,1.97773272513395,0.7104801149461,0,0,0,0,0,0,0.220868540951614,0,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0,0,0,0,0,3.18850937571846,215.966393122328,24.478968013479,272.550111777098,330.736196480864,184.587077484102,45.7848809629511,0,0,0,0.14084341977668,0,0,0,0,0,0,61.8876628077305,38.3228067797814,1.03909497345377,0,1.21786191324856,0.691846491768175,0.452167921657868,1.88141931417128,1.38233250462643,3.70792451601561,0.86759614151947,0.884610551949874,0.323533699894818,1.10420759230197,0.484875253135222,0,0,0,1.53274233125155,0.838705871541442,0,0.635351135365324,0,0,0,0,0.255715457330331,0.20778804455956,0.162241263067758,0.101839363850316,1.24406970610093,0.252722758433675,0.631325567659422,0.650602214813519,0.229902104433473,0,0.753524089178575,0,0,0.281105173679186,0.258703370739016,0,0,0.527853372491847,0.219195732427575,0.556094498451196,0,0.205782136407943,0.398068533636986,0,0,0,0,0,0,0,0.393528463494808,0,0.232533944750408,0,0,0.16455984991348,0.164167464079095,0,0,0.439100230582101,0.268412837520744,0,0,1.65209391491899,1.58670339998127,0.853153002140936,1.85789337488351,3.35055399437443,3.02525286935014,2.00140239460383,4.1849637744763,0.949058123089023,1.97638745668813,1.00534083520108,1.39269530428806,1.16978452271472,2.69645822596266,2.16138049874694,1.99141273254367,0.379335801906163,3.31320686568214,0,6.10953983535943,3.68509725618489,3.43665517462561,7.96780367765642,20.0749801252259,20.2528358915373,17.3990001129739,100.200987955456,0.667380422864376,0.393117990226406,2.69834534861824,6.28866376304359,13.5059209461353,14.2590476997595,14.9601991474422,25.2930953769055,56.0105282903686,73.3217853289508,88.1974045974353,85.186284760275,97.242868009638,166.839594575378,416.831202457949,3.32555742299888,0,0.162964976442026,0.509235257325564,0.234690248288502,0.167506257441816,0.238043640886014,0.585400943573396,1.57635144106191,0.221464689648775,1.75400245523236,3.93271955317771,4.83517949224508,4.48412081602686,0,3.80733978673097,0.491764273019036,2.20749397043786,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0.178065603667255,0.651547837414304,0.329940245945071,0,3.15614827001476,3.02323556964751,0.943025398779491,0.295301892880773,0.614870295887855,1.55056975900933,0.727067458955011,1.42598951353889,0.948110273807448,0,1.03135543248187,0,0.36012218806262,0.388076051348264,0.857348140126369,0,0,0.164549020602121,0,1.40803024838226,0,0,0.8244312647074,0.161464426695906,0.180938774784468,0.238744688006273,0.328281799490123,3.78925087618806,0.556275906031529,8.03093139749908,1.23832120777933,1.11116716421827,4.33247451110789,6.28793447516716,8.46479240864134,1.5298058699447,2.09927178485487,2.21119958087078,0,0.158167996790568,1.01659733563424,1.18805874903981,0.209088296014469,2.83871332870031,5.39457385539283,7.85207829390691,0.26175594198403,0.648074866458964,1.24267862617385,0,0.149516546043979,0.330916980914195,0.194451188344048,0.258319646955462,0,0,1.3020438484395,0,0,0,2.8441000856536,0.405450430580328,1.33524244314275,2.33857481360031,1.07416017400489,1.39076948346885,1.32214994471966,1.77227432609493,2.72609414859999,1.37172251979,3.42809029465258,2.14407337627455,2.88635524920988,3.15567635890236,0,0,0,0,0.965947970160952,0.563047426353546,0.549454872801795,0.428736758158132,0,0.564751842617067,0,0.572895513439397,0.171853182343688,0,0,0,0,0,0,0.415149390336707,0.399024873401031,0.512200817262403,0.972426868273176,1.67690530102386,1.10306105070008,2.44471400581777,1.03017528619447,0.320919209591815,3.03236654116557,2.02783439912192,1.69763707247469,3.46473577638565,2.11283002936069,2.64203157195821,1.42888107384922,2.43357084484197,1.92909220463705,2.47251540481984,2.06078488188156,1.02860775715625,3.01708870470874,1.90748951957857,2.18019624948493,2.72917203204459,1.77690676572521,3.10977553883713,1.8414879800649,1.7654534799962,1.12228454331548,2.01679530811096,1.37906275325789,1.22769312950907,2.78886314134739,2.12197272079256,0,3.27504251823572,3.65280791882107,0,0.882365676478062,0 | ||
|short_description=p1@Kynu | |short_description=p1@Kynu | ||
}} | }} |
Latest revision as of 17:13, 26 September 2015
Short description: | p1@Kynu |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Kynu_5end |
Coexpression cluster: | MCL_coexpression_mm9:8 |
Association with transcript: | 0bp_to_ENSMUST00000028223, ENSMUST00000138540, NM_027552, uc008jos.1, uc008jot.1, uc012bvc.1_5end |
EntrezGene: | Kynu |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
abdomen element | 4.08e-16 | 49 |
abdominal segment element | 4.08e-16 | 49 |
abdominal segment of trunk | 4.08e-16 | 49 |
abdomen | 4.08e-16 | 49 |
liver | 1.98e-14 | 22 |
epithelial sac | 1.98e-14 | 22 |
digestive gland | 1.98e-14 | 22 |
epithelium of foregut-midgut junction | 1.98e-14 | 22 |
anatomical boundary | 1.98e-14 | 22 |
hepatobiliary system | 1.98e-14 | 22 |
foregut-midgut junction | 1.98e-14 | 22 |
hepatic diverticulum | 1.98e-14 | 22 |
liver primordium | 1.98e-14 | 22 |
septum transversum | 1.98e-14 | 22 |
liver bud | 1.98e-14 | 22 |
exocrine gland | 1.06e-13 | 25 |
exocrine system | 1.06e-13 | 25 |
digestive tract diverticulum | 2.19e-13 | 23 |
sac | 2.19e-13 | 23 |
subdivision of trunk | 8.52e-13 | 66 |
digestive system | 5.42e-12 | 116 |
digestive tract | 5.42e-12 | 116 |
primitive gut | 5.42e-12 | 116 |
endoderm-derived structure | 6.67e-12 | 118 |
endoderm | 6.67e-12 | 118 |
presumptive endoderm | 6.67e-12 | 118 |
subdivision of digestive tract | 4.53e-11 | 114 |
trunk region element | 6.32e-11 | 79 |
foregut | 2.99e-10 | 80 |
trunk | 1.33e-08 | 90 |
gut epithelium | 3.55e-08 | 55 |
endo-epithelium | 1.26e-07 | 69 |
mesenchyme | 2.38e-07 | 61 |
entire embryonic mesenchyme | 2.38e-07 | 61 |
endocrine gland | 5.46e-07 | 60 |