FFCP PHASE1:Mm9::chr4:151693109..151693123,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=433809 | |EntrezGene=433809 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=2039 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-7bp_to_ENSMUST00000134269_5end | |association_with_transcript=-7bp_to_ENSMUST00000134269_5end | ||
|cluster_id=chr4:151693109..151693123,- | |||
|description=CAGE_peak_2_at_Rnf207_5end | |description=CAGE_peak_2_at_Rnf207_5end | ||
|id=chr4:151693109..151693123,- | |id=chr4:151693109..151693123,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004535!3.81e-16!23;UBERON:0001009!3.81e-16!23;UBERON:0007100!4.57e-16!18;UBERON:0000948!4.57e-16!18;UBERON:0005498!4.57e-16!18;UBERON:0004140!4.57e-16!18;UBERON:0009881!4.57e-16!18;UBERON:0004141!4.57e-16!18;UBERON:0003084!4.57e-16!18;UBERON:0007005!4.57e-16!18;UBERON:0004139!4.57e-16!18;UBERON:0004291!4.57e-16!18;UBERON:0004872!3.53e-09!33;UBERON:0000025!1.65e-08!114;UBERON:0003103!6.01e-08!43;UBERON:0004111!1.16e-07!122 | |ontology_enrichment_uberon=UBERON:0004535!3.81e-16!23;UBERON:0001009!3.81e-16!23;UBERON:0007100!4.57e-16!18;UBERON:0000948!4.57e-16!18;UBERON:0005498!4.57e-16!18;UBERON:0004140!4.57e-16!18;UBERON:0009881!4.57e-16!18;UBERON:0004141!4.57e-16!18;UBERON:0003084!4.57e-16!18;UBERON:0007005!4.57e-16!18;UBERON:0004139!4.57e-16!18;UBERON:0004291!4.57e-16!18;UBERON:0004872!3.53e-09!33;UBERON:0000025!1.65e-08!114;UBERON:0003103!6.01e-08!43;UBERON:0004111!1.16e-07!122 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0007100,2.68e-59,18;UBERON:0000948,2.68e-59,18;UBERON:0005498,2.68e-59,18;UBERON:0004140,2.68e-59,18;UBERON:0009881,2.68e-59,18;UBERON:0004141,2.68e-59,18;UBERON:0003084,2.68e-59,18;UBERON:0007005,2.68e-59,18;UBERON:0004139,2.68e-59,18;UBERON:0004291,2.68e-59,18;UBERON:0004535,5.34e-46,23;UBERON:0001009,5.34e-46,23;UBERON:0004872,1.81e-31,33;UBERON:0003103,1.12e-23,43;UBERON:0003914,1.74e-21,47;UBERON:0010314,2.15e-13,92;UBERON:0003081,1.32e-10,87;UBERON:0001048,1.96e-08,134;UBERON:0000025,1.50e-07,114;UBERON:0000926,4.68e-07,120;UBERON:0004120,4.68e-07,120;UBERON:0006603,4.68e-07,120;UBERON:0004111,6.68e-07,122 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.608261587317087,0.734187008646726,0,0,0,0.194429899074283,0,0,0,0,0,0,0,0.515672092277442,0,0,0,0,0,0,0,0,0,0,0,0.405017814995072,0,0.285650984403804,0,0,0,0,1.10115880999389,0.766124028511126,0.46081959976873,0,0.548925861614458,0.52091337055676,0.279182999001381,0,0.45839474333043,0.294628585473668,0.142371680799103,0.372798891650601,0,0.0755715601067855,0,0,0,0,0,0,0,0.170430322578058,0,0,0.281686839553361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149790639404823,0,0,0.173824320192276,0,0.41557608911912,0,0,0,0,7.36546495602659,0,0.229902104433473,0.180062129805349,0,0.0680364991513279,0.12811372028485,0.374806898238915,6.72628763921441,0,0.189106080167819,0,0.219195732427575,0,0,0,0,0,0,0,1.86413195281952,2.34526059981096,2.52086886045421,4.7348947117042,3.54175617145327,5.39934895105824,6.0458825635106,2.68273401399619,5.3712057488898,6.25327429671226,4.10418660197738,2.35099547682982,2.48539978623065,1.53685080703735,1.07365135008297,0,0,0,0,0,0,0,0,0,0.190225626112559,0,0,0.251335208800269,0.198956472041151,0.38992817423824,0,0.216138049874694,0.199141273254367,0,0,0,0,0.387904974335251,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0.37898282354097,0.488894929326078,0,0,0,0,0,0,0,0.478364305972461,0.163863314715738,0,0.144649058581512,0,0,0,0.275936746304732,0.481651769963376,0.586058432961016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0.242780636154981,0,0,0,0.307435147943927,0,0,0,0,0,0,0,0.36012218806262,0.258717367565509,0.428674070063185,0.177340233642274,0,0,0,0,0,0,0,0,0,0,0,0,0.370850604021019,0,0,0,0,0,0,0.339956859987711,0,0,0,0,0,0,0,0,0,0.0826534557253359,0,0.129614973291793,0,0,0.149516546043979,0,0,0,0,0.352071715937262,0.13020438484395,0.104859344425711,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221985953374065,0,0,0,0,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0.51776031175182,0.207574695168353,0,0.170733605754134,0,0.209613162627982,0,0,0,0,0.252697211763798,0.25347929989024,0,0.0936415074698824,0.0640251524048693,0.229741875822453,0,0,0,0,0,0.342869252385415,0,0.238436189947321,0,0.0941093804153306,0.169229215783353,0,0,0.135804113845862,0.561142271657738,0.237270036248348,0.0985044823755635,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.608261587317087,0.734187008646726,0,0,0,0.194429899074283,0,0,0,0,0,0,0,0.515672092277442,0,0,0,0,0,0,0,0,0,0,0,0.405017814995072,0,0.285650984403804,0,0,0,0,1.10115880999389,0.766124028511126,0.46081959976873,0,0.548925861614458,0.52091337055676,0.279182999001381,0,0.45839474333043,0.294628585473668,0.142371680799103,0.372798891650601,0,0.0755715601067855,0,0,0,0,0,0,0,0.170430322578058,0,0,0.281686839553361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149790639404823,0,0,0.173824320192276,0,0.41557608911912,0,0,0,0,7.36546495602659,0,0.229902104433473,0.180062129805349,0,0.0680364991513279,0.12811372028485,0.374806898238915,6.72628763921441,0,0.189106080167819,0,0.219195732427575,0,0,0,0,0,0,0,1.86413195281952,2.34526059981096,2.52086886045421,4.7348947117042,3.54175617145327,5.39934895105824,6.0458825635106,2.68273401399619,5.3712057488898,6.25327429671226,4.10418660197738,2.35099547682982,2.48539978623065,1.53685080703735,1.07365135008297,0,0,0,0,0,0,0,0,0,0.190225626112559,0,0,0.251335208800269,0.198956472041151,0.38992817423824,0,0.216138049874694,0.199141273254367,0,0,0,0,0.387904974335251,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0.37898282354097,0.488894929326078,0,0,0,0,0,0,0,0.478364305972461,0.163863314715738,0,0.144649058581512,0,0,0,0.275936746304732,0.481651769963376,0.586058432961016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0.242780636154981,0,0,0,0.307435147943927,0,0,0,0,0,0,0,0.36012218806262,0.258717367565509,0.428674070063185,0.177340233642274,0,0,0,0,0,0,0,0,0,0,0,0,0.370850604021019,0,0,0,0,0,0,0.339956859987711,0,0,0,0,0,0,0,0,0,0.0826534557253359,0,0.129614973291793,0,0,0.149516546043979,0,0,0,0,0.352071715937262,0.13020438484395,0.104859344425711,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221985953374065,0,0,0,0,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0.51776031175182,0.207574695168353,0,0.170733605754134,0,0.209613162627982,0,0,0,0,0.252697211763798,0.25347929989024,0,0.0936415074698824,0.0640251524048693,0.229741875822453,0,0,0,0,0,0.342869252385415,0,0.238436189947321,0,0.0941093804153306,0.169229215783353,0,0,0.135804113845862,0.561142271657738,0.237270036248348,0.0985044823755635,0,0,0,0,0,0,0,0,0 | ||
|short_description=p2@Rnf207 | |short_description=p2@Rnf207 | ||
}} | }} |
Latest revision as of 19:05, 26 September 2015
Short description: | p2@Rnf207 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Rnf207_5end |
Coexpression cluster: | MCL_coexpression_mm9:2039 |
Association with transcript: | -7bp_to_ENSMUST00000134269_5end |
EntrezGene: | Rnf207 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
primary circulatory organ | 2.68e-59 | 18 |
heart | 2.68e-59 | 18 |
primitive heart tube | 2.68e-59 | 18 |
primary heart field | 2.68e-59 | 18 |
anterior lateral plate mesoderm | 2.68e-59 | 18 |
heart tube | 2.68e-59 | 18 |
heart primordium | 2.68e-59 | 18 |
cardiac mesoderm | 2.68e-59 | 18 |
cardiogenic plate | 2.68e-59 | 18 |
heart rudiment | 2.68e-59 | 18 |
cardiovascular system | 5.34e-46 | 23 |
circulatory system | 5.34e-46 | 23 |
splanchnic layer of lateral plate mesoderm | 1.81e-31 | 33 |
compound organ | 1.12e-23 | 43 |
epithelial tube | 1.74e-21 | 47 |
structure with developmental contribution from neural crest | 2.15e-13 | 92 |
lateral plate mesoderm | 1.32e-10 | 87 |
primordium | 1.96e-08 | 134 |
tube | 1.50e-07 | 114 |
mesoderm | 4.68e-07 | 120 |
mesoderm-derived structure | 4.68e-07 | 120 |
presumptive mesoderm | 4.68e-07 | 120 |
anatomical conduit | 6.68e-07 | 122 |