Personal tools

FFCP PHASE1:Mm9::chr17:66122026..66122035,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(3 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=106572
|EntrezGene=106572
|HGNC=
|HGNC=
|MCL_coexpression_id=22
|MCL_coexpression_id=22
|TSSclassifier=NA
|UniProt=Q3TM43
|UniProt=Q3TM43
|association_with_transcript=-44bp_to_ENSMUST00000165932_5end
|association_with_transcript=-44bp_to_ENSMUST00000165932_5end
|cluster_id=chr17:66122026..66122035,-
|description=CAGE_peak_3_at_Rab31_5end
|description=CAGE_peak_3_at_Rab31_5end
|id=chr17:66122026..66122035,-
|id=chr17:66122026..66122035,-
|ontology_enrichment_celltype=CL:0002319!1.23e-16!43;CL:0000221!1.28e-16!44;CL:0000133!1.28e-16!44;CL:0000055!7.83e-16!50;CL:0000540!6.81e-13!33;CL:0000047!6.81e-13!33;CL:0000031!6.81e-13!33;CL:0000404!6.81e-13!33;CL:0000393!2.85e-12!39;CL:0000211!2.85e-12!39;CL:0000117!9.82e-09!23;CL:0000337!9.82e-09!23;CL:0002321!5.03e-07!70;CL:0000220!5.03e-07!70
|ontology_enrichment_celltype=CL:0002319!1.23e-16!43;CL:0000221!1.28e-16!44;CL:0000133!1.28e-16!44;CL:0000055!7.83e-16!50;CL:0000540!6.81e-13!33;CL:0000047!6.81e-13!33;CL:0000031!6.81e-13!33;CL:0000404!6.81e-13!33;CL:0000393!2.85e-12!39;CL:0000211!2.85e-12!39;CL:0000117!9.82e-09!23;CL:0000337!9.82e-09!23;CL:0002321!5.03e-07!70;CL:0000220!5.03e-07!70
|ontology_enrichment_celltype_v019_2=CL:0002319,1.21e-19,43;CL:0000221,1.24e-19,44;CL:0000133,1.24e-19,44;CL:0000540,6.27e-15,33;CL:0000047,6.27e-15,33;CL:0000031,6.27e-15,33;CL:0000404,6.27e-15,33;CL:0000393,3.17e-13,39;CL:0000211,3.17e-13,39;CL:0002321,4.97e-11,70;CL:0000117,9.98e-10,23;CL:0000337,9.98e-10,23
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000073!3.43e-13!75;UBERON:0001016!3.43e-13!75;UBERON:0001017!1.57e-12!73;UBERON:0005743!1.57e-12!73;UBERON:0004121!9.85e-12!102;UBERON:0000924!9.85e-12!102;UBERON:0006601!9.85e-12!102;UBERON:0002346!3.68e-08!71;UBERON:0003075!3.68e-08!71;UBERON:0007284!3.68e-08!71
|ontology_enrichment_uberon=UBERON:0000073!3.43e-13!75;UBERON:0001016!3.43e-13!75;UBERON:0001017!1.57e-12!73;UBERON:0005743!1.57e-12!73;UBERON:0004121!9.85e-12!102;UBERON:0000924!9.85e-12!102;UBERON:0006601!9.85e-12!102;UBERON:0002346!3.68e-08!71;UBERON:0003075!3.68e-08!71;UBERON:0007284!3.68e-08!71
|ontology_enrichment_uberon_v019_2=UBERON:0001016,4.94e-13,75;UBERON:0001017,2.91e-12,73;UBERON:0004121,5.70e-12,95;UBERON:0000924,5.70e-12,95;UBERON:0006601,5.70e-12,95;UBERON:0002346,8.66e-08,64;UBERON:0003075,8.66e-08,64;UBERON:0007284,8.66e-08,64;UBERON:0010371,3.40e-07,73;UBERON:0002020,4.45e-07,34
|phase1_expression=1.92178616525753,0.348975407639361,0,0,0,0.503637815735669,0,0,0,0,0,0,0,0,0,0,0,0,0.274228867211478,0.42438965179803,0.255129870453209,0.0992909512008853,0,0.319984845586813,0.22940928106717,0.57423196411502,0.430761996159075,0.646413698057667,0.190023419456374,0.252030129759931,0.443461021310609,0,0,0,0,0,0,0.837063261473815,0,1.57057123192139,0.588231488031014,0.683045484958446,0.971020706062307,1.6366586336825,1.01376931219515,1.46837401729345,1.56478268869608,4.36050312760893,2.63623419281366,2.72201858703997,3.07970127575798,1.43752564364972,0.335565212115473,0,0,0.771778308107841,0.85960031981627,0.515672092277442,7.68802551266472,6.34789175126439,8.23980824558033,1.69422266034566,0.889294796111139,0.899899717281399,0.988866362566974,1.4209602298922,1.79760066311043,1.15265491596466,5.80661828927475,4.99521971827255,3.78584930432488,2.28520787523043,2.65042249141936,7.4719387521122,6.42164655822184,7.35375029288017,2.20231761998777,0.766124028511126,0.921639199537461,8.5726087024626,7.86793734980723,9.89735404057844,0.837548997004143,0,0.30559649555362,2.94628585473668,1.42371680799103,5.03278503728312,1.4387976733305,2.26714680320357,3.18850937571846,0.860423876981386,0,0,0,0,0.280888840263504,1.36344258062446,1.03914401841148,1.41335829804136,1.12674735821344,0,0,7.11066703153331,0.432982082022428,1.01343946190039,1.51657333504435,0.11418387971906,1.03575153458869,0.29688427812965,1.21439728736295,1.82679286987285,0.691846491768175,0.753613202763113,0.352766121407114,0.753999547978053,0.494389935468748,0,0,0.647067399789637,0.220841518460394,0,0,0.585561594023094,1.8850203613211,0,1.43778149407104,0,1.65191295194984,0.748953197024114,0.457500602818626,2.89005009859588,0.869121600961382,1.27857728665165,0.62336413367868,0.811206315338788,1.83310854930569,0.622034853050465,0,0.631325567659422,1.04096354370163,1.37941262660084,0.900310649026746,1.80845781402858,1.76894897793452,2.0498195245576,1.59292931751539,1.29351685369508,1.72454394346274,1.51284864134255,3.34307135911503,1.31517439456545,1.66828349535359,0.696504333044333,0.61734640922383,1.39323986772945,1.40442637462647,0.772043721344145,0.284163499395593,1.24275463521301,0.469052119962192,1.08037236876609,0.946978942340841,0.787056926989615,0.925602677324269,0.465067889500816,0.268273401399619,0.700592054203017,0.822799249567402,0.492502392237286,0.56748166682099,0.146199987425332,0.658650345873152,0,0.210289948564127,6.89460902941206,0.330418782983798,0.264450566663544,1.49301775374664,1.16118335930219,0.902072229254653,0.403367049246685,0.889512175379481,1.33157938278791,0.474529061544512,1.81168850196412,1.50801125280162,0.994782360205754,0.779856348476481,0,0.216138049874694,0,1.32767530667157,0.913988100877831,2.25415471346161,0.814605311381257,0.387904974335251,0.841629838683823,0.948548056863859,0.590440591918409,0.31399745568275,0,0.296452627087149,0.333690211432188,0.982794975566015,0,0,0.241177159752417,0,0.287696137450811,0.324270453550071,0.274561413188081,0,0,0.312037673114561,0,0,0,0.369506380333209,1.51593129416388,1.30371981153621,0.678980343100753,0.469380496577004,0.670025029767263,0.952174563544055,0.585400943573396,1.57635144106191,2.43611158613652,1.75400245523236,0.983179888294428,0.518054945597687,0.578596234326046,3.01582567878545,1.63171705145613,0,0,0.963303539926752,1.40654023910644,0.983609672260053,0.504941854408746,1.26203287766503,1.56175497718655,2.15423397732799,2.15071918157297,2.67358408898873,3.39691836946599,2.02405350837447,2.33804686329049,2.76701444562566,0,0.99358059645788,1.95872164033981,2.76907830901079,0.824850614862677,0,0,0.302323556964751,0,0.885905678642318,0.307435147943927,0.258428293168221,0.727067458955011,1.06949213515416,0.316036757935816,1.05418608574999,0,0.340439605753788,1.8006109403131,0.776152102696527,1.28602221018955,1.59606210278046,0.713475270408282,0.987294123612726,1.522324745573,0.23467170806371,1.27099242518292,0.661585194164886,0.98931751764888,1.77610869365496,1.20625849856312,0.477489376012546,0.656563598980245,0,0.556275906031529,0.170870880797853,0.412773735926445,0.555583582109135,0.376736914009382,0.546776910884101,0.457556346413045,1.86976272993241,1.25956307091292,1.79659965945751,0,2.37251995185852,1.21991680276109,0.756037385752609,0.627264888043406,1.09181281873089,1.21377911746339,0.909188012978695,0.26175594198403,0,0,0.56369293868419,1.19613236835183,1.82004339502807,1.16670713006429,1.16243841129958,2.19642963138012,2.34714477291508,1.8228613878153,3.25063967719704,1.44950472495604,0.864090018773596,0,0.405450430580328,0.205421914329655,0.129920822977795,0.537080087002444,0,0.120195449519969,0.147689527174577,0.100966449948148,0.0762068066549998,0.302478555410522,0.38983152295901,0.0962118416403295,0.350630706544707,0.226730383615211,1.55390167361845,1.61484941897056,1.17519231454855,0.579568782096571,0.93841237725591,0.73260649706906,1.07184189539533,1.00314420807073,0.564751842617067,1.84130094602871,1.71868654031819,2.40594455281163,0,1.5107877947794,0,0.900642406448441,0.453142408984205,0.51776031175182,1.97195960409936,3.19219898720825,1.53660245178721,0.729320151204882,3.14419743941973,1.47074806760011,1.77797382241292,0.824140228955577,0.320919209591815,1.51618327058278,1.52087579934144,1.13175804831646,1.49826411951812,0.960377286073039,1.60819313075717,0.952587382566147,0.927074607558844,1.54327376370964,1.23625770240992,0.588795680537589,1.71434626192708,1.06485483695602,1.1921809497366,1.16277133305863,0.752875043322645,1.26921911837515,2.56099162021882,1.31534855718921,1.62964936615034,0,1.77952527186261,1.57607171800902,0.409231043169689,1.08455788830176,2.12197272079256,0.499621155875892,0.467863216890817,1.07435527024149,0.57386499620653,0.661774257358546,0.695603506861264
|phase1_expression=1.92178616525753,0.348975407639361,0,0,0,0.503637815735669,0,0,0,0,0,0,0,0,0,0,0,0,0.274228867211478,0.42438965179803,0.255129870453209,0.0992909512008853,0,0.319984845586813,0.22940928106717,0.57423196411502,0.430761996159075,0.646413698057667,0.190023419456374,0.252030129759931,0.443461021310609,0,0,0,0,0,0,0.837063261473815,0,1.57057123192139,0.588231488031014,0.683045484958446,0.971020706062307,1.6366586336825,1.01376931219515,1.46837401729345,1.56478268869608,4.36050312760893,2.63623419281366,2.72201858703997,3.07970127575798,1.43752564364972,0.335565212115473,0,0,0.771778308107841,0.85960031981627,0.515672092277442,7.68802551266472,6.34789175126439,8.23980824558033,1.69422266034566,0.889294796111139,0.899899717281399,0.988866362566974,1.4209602298922,1.79760066311043,1.15265491596466,5.80661828927475,4.99521971827255,3.78584930432488,2.28520787523043,2.65042249141936,7.4719387521122,6.42164655822184,7.35375029288017,2.20231761998777,0.766124028511126,0.921639199537461,8.5726087024626,7.86793734980723,9.89735404057844,0.837548997004143,0,0.30559649555362,2.94628585473668,1.42371680799103,5.03278503728312,1.4387976733305,2.26714680320357,3.18850937571846,0.860423876981386,0,0,0,0,0.280888840263504,1.36344258062446,1.03914401841148,1.41335829804136,1.12674735821344,0,0,7.11066703153331,0.432982082022428,1.01343946190039,1.51657333504435,0.11418387971906,1.03575153458869,0.29688427812965,1.21439728736295,1.82679286987285,0.691846491768175,0.753613202763113,0.352766121407114,0.753999547978053,0.494389935468748,0,0,0.647067399789637,0.220841518460394,0,0,0.585561594023094,1.8850203613211,0,1.43778149407104,0,1.65191295194984,0.748953197024114,0.457500602818626,2.89005009859588,0.869121600961382,1.27857728665165,0.62336413367868,0.811206315338788,1.83310854930569,0.622034853050465,0,0.631325567659422,1.04096354370163,1.37941262660084,0.900310649026746,1.80845781402858,1.76894897793452,2.0498195245576,1.59292931751539,1.29351685369508,1.72454394346274,1.51284864134255,3.34307135911503,1.31517439456545,1.66828349535359,0.696504333044333,0.61734640922383,1.39323986772945,1.40442637462647,0.772043721344145,0.284163499395593,1.24275463521301,0.469052119962192,1.08037236876609,0.946978942340841,0.787056926989615,0.925602677324269,0.465067889500816,0.268273401399619,0.700592054203017,0.822799249567402,0.492502392237286,0.56748166682099,0.146199987425332,0.658650345873152,0,0.210289948564127,6.89460902941206,0.330418782983798,0.264450566663544,1.49301775374664,1.16118335930219,0.902072229254653,0.403367049246685,0.889512175379481,1.33157938278791,0.474529061544512,1.81168850196412,1.50801125280162,0.994782360205754,0.779856348476481,0,0.216138049874694,0,1.32767530667157,0.913988100877831,2.25415471346161,0.814605311381257,0.387904974335251,0.841629838683823,0.948548056863859,0.590440591918409,0.31399745568275,0,0.296452627087149,0.333690211432188,0.982794975566015,0,0,0.241177159752417,0,0.287696137450811,0.324270453550071,0.274561413188081,0,0,0.312037673114561,0,0,0,0.369506380333209,1.51593129416388,1.30371981153621,0.678980343100753,0.469380496577004,0.670025029767263,0.952174563544055,0.585400943573396,1.57635144106191,2.43611158613652,1.75400245523236,0.983179888294428,0.518054945597687,0.578596234326046,3.01582567878545,1.63171705145613,0,0,0.963303539926752,1.40654023910644,0.983609672260053,0.504941854408746,1.26203287766503,1.56175497718655,2.15423397732799,2.15071918157297,2.67358408898873,3.39691836946599,2.02405350837447,2.33804686329049,2.76701444562566,0,0.99358059645788,1.95872164033981,2.76907830901079,0.824850614862677,0,0,0.302323556964751,0,0.885905678642318,0.307435147943927,0.258428293168221,0.727067458955011,1.06949213515416,0.316036757935816,1.05418608574999,0,0.340439605753788,1.8006109403131,0.776152102696527,1.28602221018955,1.59606210278046,0.713475270408282,0.987294123612726,1.522324745573,0.23467170806371,1.27099242518292,0.661585194164886,0.98931751764888,1.77610869365496,1.20625849856312,0.477489376012546,0.656563598980245,0,0.556275906031529,0.170870880797853,0.412773735926445,0.555583582109135,0.376736914009382,0.546776910884101,0.457556346413045,1.86976272993241,1.25956307091292,1.79659965945751,0,2.37251995185852,1.21991680276109,0.756037385752609,0.627264888043406,1.09181281873089,1.21377911746339,0.909188012978695,0.26175594198403,0,0,0.56369293868419,1.19613236835183,1.82004339502807,1.16670713006429,1.16243841129958,2.19642963138012,2.34714477291508,1.8228613878153,3.25063967719704,1.44950472495604,0.864090018773596,0,0.405450430580328,0.205421914329655,0.129920822977795,0.537080087002444,0,0.120195449519969,0.147689527174577,0.100966449948148,0.0762068066549998,0.302478555410522,0.38983152295901,0.0962118416403295,0.350630706544707,0.226730383615211,1.55390167361845,1.61484941897056,1.17519231454855,0.579568782096571,0.93841237725591,0.73260649706906,1.07184189539533,1.00314420807073,0.564751842617067,1.84130094602871,1.71868654031819,2.40594455281163,0,1.5107877947794,0,0.900642406448441,0.453142408984205,0.51776031175182,1.97195960409936,3.19219898720825,1.53660245178721,0.729320151204882,3.14419743941973,1.47074806760011,1.77797382241292,0.824140228955577,0.320919209591815,1.51618327058278,1.52087579934144,1.13175804831646,1.49826411951812,0.960377286073039,1.60819313075717,0.952587382566147,0.927074607558844,1.54327376370964,1.23625770240992,0.588795680537589,1.71434626192708,1.06485483695602,1.1921809497366,1.16277133305863,0.752875043322645,1.26921911837515,2.56099162021882,1.31534855718921,1.62964936615034,0,1.77952527186261,1.57607171800902,0.409231043169689,1.08455788830176,2.12197272079256,0.499621155875892,0.467863216890817,1.07435527024149,0.57386499620653,0.661774257358546,0.695603506861264
|short_description=p3@Rab31
|short_description=p3@Rab31
}}
}}

Latest revision as of 19:08, 26 September 2015

Short description:p3@Rab31
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Rab31_5end
Coexpression cluster:MCL_coexpression_mm9:22
Association with transcript: -44bp_to_ENSMUST00000165932_5end
EntrezGene:Rab31
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Rab31

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.92
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.35
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.27
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.42
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.26
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.10
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.32
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.23
GP2+ M cell, pool1.CNhs13228.11845-124H90.57
GP2+ M cell, pool2.CNhs13231.11846-124I10.43
GP2+ M cell, pool3.CNhs13240.11847-124I20.65
Ileum epithelium, pool1.CNhs13199.10252-104B90.19
Ileum epithelium, pool2.CNhs13232.10253-104C10.25
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.44
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.84
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H31.57
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.59
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.68
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.97
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D81.64
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D91.01
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B31.47
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B71.56
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C24.36
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B82.64
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C32.72
Mouse Astrocytes, donor2.CNhs12078.11552-120C43.08
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.34
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.77
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.86
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C37.69
Mouse Granule cells, donor2.CNhs12357.11731-123E36.35
Mouse Granule cells, donor3.CNhs12108.11636-122C78.24
Mouse Meningeal cells, donor1.CNhs12132.11716-123C61.69
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.90
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.99
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D21.42
Mouse Microglia, donor1.CNhs12629.11718-123C81.80
Mouse Microglia, donor2.CNhs12634.11736-123E81.15
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D55.81
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F55.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D93.79
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F12.29
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D52.65
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D27.47
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F26.42
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D67.35
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D32.20
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.77
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.92
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D48.57
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F47.87
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D89.90
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.84
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.31
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D62.95
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.42
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E15.03
Mouse Schwann, donor1.CNhs12507.11728-123D91.44
Mouse Schwann, donor2.CNhs12573.11746-123F92.27
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G33.19
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.28
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I71.36
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E31.04
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I81.41
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.13
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B67.11
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.43
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G21.01
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G31.52
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.11
accessory axillary lymph node, adult.CNhs10475.1063-29H91.04
adrenal gland, adult.CNhs10508.49-24D70.30
adrenal gland, embryo E14.CNhs11038.406-44C51.21
adrenal gland, embryo E16.CNhs11004.1254-43D61.83
adrenal gland, embryo E17.CNhs11043.1263-45I10.69
adrenal gland, embryo E18.CNhs11026.1262-18F50.75
adrenal gland, neonate N00.CNhs11191.1311-23C10.35
adrenal gland, neonate N25.CNhs11223.1377-27I30.75
amnion, adult pregnant day17.5.CNhs10488.583-22A80.49
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.65
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.59
cerebellum, neonate N30.CNhs11135.1395-42I21.89
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C71.44
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D41.65
corpora quadrigemina, adult.CNhs10501.16-22A40.75
corpus striatum, adult.CNhs10487.19-21D80.46
corpus striatum, neonate N00.CNhs11226.630-43F12.89
cortex, adult.CNhs10473.12-14D50.87
cortex, neonate N30.CNhs11107.1392-42F21.28
diencephalon, adult.CNhs10482.20-12F20.62
diencephalon, neonate N30.CNhs11201.1388-42B20.81
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.83
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.62
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.63
eyeball, embryo E12.CNhs11016.345-16C61.04
eyeball, embryo E14.CNhs10521.399-16E21.38
eyeball, embryo E15.CNhs10593.426-16C90.90
eyeball, embryo E17.CNhs11023.1261-18D41.81
eyeball, neonate N00.CNhs11207.633-15C61.77
eyeball, neonate N01.CNhs11140.1532-43E72.05
eyeball, neonate N02.CNhs11205.1551-44G81.59
eyeball, neonate N16.CNhs11188.777-19A21.29
forelimb, embryo E11.CNhs10596.335-25E21.72
forelimb, embryo E12.CNhs10600.359-14H21.51
forelimb, embryo E13.CNhs10589.384-1E23.34
forelimb, embryo E14.CNhs10577.413-26A81.32
forelimb, embryo E15.CNhs11007.437-20E71.67
forelimb, embryo E17.CNhs10598.1517-43C40.70
forelimb, embryo E18.CNhs11008.1520-43B50.62
gonad, embryo E13.CNhs11044.1564-45I61.39
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C81.40
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.77
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.28
heart, embryo E11.CNhs10586.331-24E91.24
heart, embryo E12.CNhs11015.353-12F50.47
heart, embryo E13.CNhs11013.376-3I91.08
heart, embryo E14.CNhs10597.403-26D40.95
heart, embryo E15.CNhs11017.431-16C80.79
heart, embryo E16.CNhs11021.457-17C60.93
heart, embryo E17.CNhs11025.479-18E50.47
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.70
heart, neonate N03.CNhs11221.1349-25I20.82
heart, neonate N10.CNhs11118.749-24G10.49
heart, neonate N16.CNhs11209.782-15G10.57
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.66
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E80.21
hippocampus, neonate N00.CNhs11228.627-43G16.89
intestinal mucosa, adult.CNhs10506.860-29I30.33
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I51.49
intestine, embryo E13.CNhs11010.381-16D51.16
intestine, embryo E15.CNhs10602.976-16D80.90
intestine, embryo E16.CNhs10585.463-22H40.40
intestine, embryo E17.CNhs10582.482-18D30.89
intestine, embryo E18.CNhs10526.1289-20F71.33
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E91.81
intestine, neonate N06.CNhs11102.688-20B81.51
intestine, neonate N07.CNhs11095.720-20F20.99
intestine, neonate N10.CNhs11098.755-23A50.78
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I91.33
kidney, embryo E15.CNhs10997.434-16F80.91
kidney, embryo E16.CNhs10584.464-22A52.25
kidney, embryo E17.CNhs11028.483-18I20.81
kidney, embryo E18.CNhs11001.1288-20C70.39
kidney, neonate N00.CNhs11214.646-21G70.84
kidney, neonate N10.CNhs11206.758-6D50.95
kidney, neonate N20.CNhs11113.832-19I10.59
kidney, neonate N25.CNhs11122.1353-25F30.31
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.30
liver, embryo E12.CNhs10601.355-15F80.33
liver, embryo E13.CNhs10524.378-3H60.98
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.24
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.29
liver, neonate N00.CNhs11117.641-24F40.32
liver, neonate N03.CNhs11123.1345-25G20.27
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.37
lung, embryo E12.CNhs10522.354-16G21.52
lung, embryo E14.CNhs10604.404-26F81.30
lung, embryo E15.CNhs11020.432-17C50.68
lung, embryo E16.CNhs10998.458-17B60.47
lung, embryo E17.CNhs10605.480-44A60.67
lung, embryo E18.CNhs10583.1287-20I60.95
lung, neonate N00.CNhs11224.640-42C60.59
lung, neonate N06.CNhs11212.683-20E51.58
lung, neonate N07.CNhs11111.715-19A32.44
lung, neonate N10.CNhs11219.750-23E61.75
lung, neonate N20.CNhs11109.822-18A40.98
lung, neonate N25.CNhs11119.1359-25C70.52
lung, neonate N30.CNhs11133.1394-42H20.58
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A13.02
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A11.63
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C20.96
medulla oblongata, neonate N30.CNhs11200.1396-42A31.41
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.98
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.50
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E11.26
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.56
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E32.15
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D72.15
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D82.67
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D93.40
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D42.02
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D52.34
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D62.77
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I70.99
ovary, embryo E18.CNhs11040.505-44H71.96
ovary, neonate N00.CNhs11217.1299-22I42.77
oviduct, adult pregnant day01.CNhs10500.988-6G60.82
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.89
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.73
pancreas, neonate N02.CNhs11139.1539-43D81.07
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E61.80
pituitary gland, embryo E13.CNhs11009.370-44C70.78
pituitary gland, embryo E14.CNhs11037.398-44A51.29
pituitary gland, embryo E15.CNhs10592.427-16B91.60
pituitary gland, embryo E16.CNhs11036.449-43F60.71
pituitary gland, embryo E17.CNhs11039.1265-44F50.99
pituitary gland, neonate N00.CNhs11190.1308-22E91.52
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G31.27
prostate, adult.CNhs10470.859-1F80.66
skin, adult.CNhs10492.30-1C30.99
skin, neonate N00.CNhs11124.650-25G41.78
skin, neonate N03.CNhs11215.662-22H31.21
skin, neonate N06.CNhs11097.693-20I50.48
skin, neonate N10.CNhs11108.762-6C40.66
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C90.56
spleen, adult.CNhs10465.25-2G20.17
spleen, embryo E16.CNhs11035.461-43C10.41
spleen, embryo E18.CNhs11011.1271-21F20.56
spleen, neonate N10.CNhs11116.752-24D10.38
spleen, neonate N20.CNhs11112.824-19H10.55
spleen, neonate N25.CNhs11099.1354-25G30.46
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C61.87
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C91.26
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D31.80
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E32.37
stomach, embryo E15.CNhs10603.1252-16G81.22
stomach, embryo E16.CNhs11022.459-17D40.76
stomach, embryo E17.CNhs11006.1035-18D50.63
stomach, embryo E18.CNhs10999.1286-20C61.09
stomach, neonate N03.CNhs11193.1340-24B81.21
stomach, neonate N07.CNhs11210.718-18A90.91
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F51.20
testis, embryo E15.CNhs11034.443-27C51.82
testis, embryo E16.CNhs11033.470-26G51.17
testis, embryo E17.CNhs11029.486-18I51.16
testis, embryo E18.CNhs11027.503-18G52.20
testis, neonate N00.CNhs11189.1300-22B72.35
testis, neonate N07.CNhs11222.726-26I41.82
testis, neonate N10.CNhs11204.763-44D93.25
testis, neonate N20.CNhs11110.839-18H31.45
testis, neonate N30.CNhs11130.1391-42E20.86
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.41
thymus, embryo E15.CNhs11005.430-45I20.21
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.54
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.12
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.10
thymus, neonate N07.CNhs11211.713-19D30.08
thymus, neonate N10.CNhs11194.748-24E40.30
thymus, neonate N20.CNhs11186.820-7A20.39
thymus, neonate N25.CNhs11125.1362-25G70.10
thymus, neonate N30.CNhs11132.1393-42G20.35
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H31.55
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F71.61
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G51.18
urinary bladder, adult.CNhs10481.879-12E40.58
uterus, adult pregnant day19.CNhs10497.590-15F50.94
uterus, adult.CNhs10509.92-27E50.73
vagina, adult.CNhs10502.89-27D51.07
vesicular gland, adult.CNhs10491.51-27F81.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.56
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A21.84
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31.72
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D72.41
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A51.51
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.90
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.45
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.52
whole body, embryo E11.CNhs11014.324-5I81.97
whole body, embryo E12.CNhs10587.857-27C93.19
whole body, embryo E13.CNhs10512.372-23H21.54
whole body, embryo E14.5.CNhs10578.420-27D20.73
whole body, embryo E14.CNhs10519.395-14B13.14
whole body, embryo E16.CNhs10514.453-14F21.47
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.78
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.52
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.52
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.13
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.50
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.61
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.93
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.54
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.71
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.06
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.19
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.16
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.27
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G52.56
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.63
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.78
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.58
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.08
whole body, embryo E17.5.CNhs10513.490-9F92.12
whole body, embryo E17.CNhs10517.475-3I50.50
whole body, embryo E18.CNhs10516.493-3B30.47
whole body, neonate N00.CNhs10525.657-19C21.07
whole body, neonate N01.CNhs10576.659-23C60.57
whole body, neonate N06.CNhs10515.692-21D10.66
whole body, neonate N10.CNhs10518.761-6B40.70





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
neural cell1.21e-1943
ectodermal cell1.24e-1944
neurectodermal cell1.24e-1944
neuron6.27e-1533
neuronal stem cell6.27e-1533
neuroblast6.27e-1533
electrically signaling cell6.27e-1533
electrically responsive cell3.17e-1339
electrically active cell3.17e-1339
embryonic cell4.97e-1170
CNS neuron (sensu Vertebrata)9.98e-1023
neuroblast (sensu Vertebrata)9.98e-1023

Uber anatomy
Ontology termp-valuen
nervous system4.94e-1375
central nervous system2.91e-1273
ectoderm-derived structure5.70e-1295
ectoderm5.70e-1295
presumptive ectoderm5.70e-1295
neurectoderm8.66e-0864
neural plate8.66e-0864
presumptive neural plate8.66e-0864
ecto-epithelium3.40e-0773
gray matter4.45e-0734
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr17:66122026..66122035,-&oldid=4269537"