Personal tools

FFCP PHASE1:Mm9::chr9:58160962..58160973,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(3 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=16949
|EntrezGene=16949
|HGNC=
|HGNC=
|TSSclassifier=NA
|UniProt=Q4QQJ7
|UniProt=Q4QQJ7
|association_with_transcript=17bp_to_ENSMUST00000167425_5end
|association_with_transcript=17bp_to_ENSMUST00000167425_5end
|cluster_id=chr9:58160962..58160973,-
|description=CAGE_peak_3_at_Loxl1_5end
|description=CAGE_peak_3_at_Loxl1_5end
|id=chr9:58160962..58160973,-
|id=chr9:58160962..58160973,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004535!4.19e-08!23;UBERON:0001009!4.19e-08!23;UBERON:0007100!2.88e-07!18;UBERON:0000948!2.88e-07!18;UBERON:0005498!2.88e-07!18;UBERON:0004140!2.88e-07!18;UBERON:0009881!2.88e-07!18;UBERON:0004141!2.88e-07!18;UBERON:0003084!2.88e-07!18;UBERON:0007005!2.88e-07!18;UBERON:0004139!2.88e-07!18;UBERON:0004291!2.88e-07!18
|ontology_enrichment_uberon=UBERON:0004535!4.19e-08!23;UBERON:0001009!4.19e-08!23;UBERON:0007100!2.88e-07!18;UBERON:0000948!2.88e-07!18;UBERON:0005498!2.88e-07!18;UBERON:0004140!2.88e-07!18;UBERON:0009881!2.88e-07!18;UBERON:0004141!2.88e-07!18;UBERON:0003084!2.88e-07!18;UBERON:0007005!2.88e-07!18;UBERON:0004139!2.88e-07!18;UBERON:0004291!2.88e-07!18
|ontology_enrichment_uberon_v019_2=UBERON:0004535,2.84e-09,23;UBERON:0001009,2.84e-09,23;UBERON:0007100,9.03e-08,18;UBERON:0000948,9.03e-08,18;UBERON:0005498,9.03e-08,18;UBERON:0004140,9.03e-08,18;UBERON:0009881,9.03e-08,18;UBERON:0004141,9.03e-08,18;UBERON:0003084,9.03e-08,18;UBERON:0007005,9.03e-08,18;UBERON:0004139,9.03e-08,18;UBERON:0004291,9.03e-08,18;UBERON:0004872,6.26e-07,33;UBERON:0002048,7.00e-07,14;UBERON:0000117,7.00e-07,14;UBERON:0000171,7.00e-07,14;UBERON:0000170,7.00e-07,14;UBERON:0005597,7.00e-07,14;UBERON:0000118,7.00e-07,14
|phase1_expression=3.52327463630547,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02051948181284,0.0992909512008853,0,0,0,0,0.430761996159075,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.5394599909254,5.67710814829281,9.54443111240744,7.82391344348039,7.19483016055474,7.24964403023757,4.6663175777828,2.09979632438044,1.43752564364972,0,0,0,11.0621557495457,10.3152038377952,6.70373719960675,0,0,0,5.76035704517525,1.77858959222228,2.6996991518442,2.96659908770092,0.7104801149461,2.99600110518405,3.45796474789399,0.933206510776299,1.62007125998029,1.47227472945967,0.285650984403804,0.441737081903227,0.367472397644862,0.287536413054709,0,0,0.127687338085188,0,0,0.274462930807229,0,0.279182999001381,0,0.45839474333043,0,0,0.186399445825301,0.302904773332736,2.56943304363071,0,0.860423876981386,0,0,0,0,0.561777680527007,3.06774580640504,1.55871602761721,3.18005617059306,1.69012103732017,0,2.54805239706646,0,0,0,0,0.22836775943812,0,1.1875371125186,0.693941307064543,0.608930956624282,0.461230994512117,0.452167921657868,1.88141931417128,1.25666591329675,0,1.15679485535929,0,2.10296904931632,2.20841518460394,0.969750506270444,0,0.292780797011547,0.209446706813455,0,0,0,0,0.149790639404823,0.457500602818626,0.502617408451458,0.347648640384553,0.255715457330331,0.41557608911912,0,3.66621709861139,1.49288364732112,0,0.210441855886474,0.260240885925407,1.37941262660084,1.26043490863744,0.90422890701429,1.36072998302656,1.15302348256365,1.96773621575431,0.776110112217047,1.29340795759705,0.567318240503458,1.58356011747554,2.19195732427575,3.61461423993277,2.089512999133,2.67516777330327,0.995171334092466,0,0,0,0.621377317606506,0.938104239924385,1.08037236876609,2.60419209143731,2.55793501271625,1.54267112887378,1.39520366850245,1.60964040839772,2.45207218971056,4.27855609775049,3.61168420974009,2.83740833410495,3.80119967305864,2.19550115291051,2.54992195644706,0.210289948564127,1.44066457330998,0,0.793351699990633,0.853153002140936,0.696710015581316,0.515469845288373,0.80673409849337,0.444756087689741,1.14135375667535,0.474529061544512,1.15289268306808,0.502670417600539,1.1937388322469,0.38992817423824,0.898819408654221,0.864552199498777,1.39398891278057,0.948339504765408,1.14248512609729,0,0.203651327845314,1.16371492300575,0.841629838683823,1.20149420536089,0.147610147979602,0.941992367048249,0.493588655687202,0.296452627087149,0.166845105716094,0.196558995113203,0,0.405720242777006,0,0.25462585178142,0.575392274901621,0.324270453550071,0.274561413188081,0,0.372140947668503,0.312037673114561,0,0,0,3.51031061316549,0.568474235311454,1.95557971730431,1.35796068620151,0.469380496577004,1.84256883185997,3.09456733151818,6.43941037930736,5.67486518782288,6.2010113101657,10.2051051940792,3.4411296090305,7.42545422023351,6.36455857758651,0,0,0.491764273019036,0.551873492609465,0.481651769963376,0.117211686592203,10.6557714494839,3.02965112645248,0,0.390438744296638,0.215423397732799,0,0,0,0.404810701674894,0,0,0.321321316421807,1.98716119291576,2.13678724400706,4.39794790254655,2.8044920905331,2.65490276679926,0.485561272309963,0.906970670894253,0.188605079755898,2.06711325016541,1.22974059177571,0.775284879504663,0.363533729477506,0.712994756769443,0.632073515871632,0,0,15.3197822589205,1.62054984628179,0.388076051348264,1.92903331528433,13.1231772895282,12.8425548673491,8.22745103010605,10.656273219011,0,0.42366414172764,0,0.49465875882444,4.19807509409354,2.17126529741361,1.90995750405018,1.14898629821543,0,0.18542530201051,0.512612642393558,1.03193433981611,1.11116716421827,0.565105371014073,0,0.457556346413045,0.169978429993855,0,0,0.954670618015114,0.790839983952838,1.01659733563424,1.08005340821801,1.46361807210128,1.74690050996942,3.2367443132357,3.2234847732881,3.14107130380836,0.648074866458964,1.24267862617385,0,0.448549638131936,1.15820943319968,1.55560950675238,1.29159823477731,1.18269287843545,1.64300134104056,1.69265700297135,1.25831213310853,0,0.576060012515731,0.316011120628178,0.608175645870493,0.616265742988964,0.129920822977795,0.358053391334963,0.39736270956253,0,0.147689527174577,0.100966449948148,0,0.302478555410522,0,0,0,0.906921534460845,0,0,0,4.25017106870819,7.50729901804728,2.01466786693992,2.14368379079066,0,0,0,0,0,0,0,0,0,0.453142408984205,0,0.103787347584177,0.399024873401031,0.341467211508268,1.45864030240976,0.209613162627982,0.735374033800057,0.666740183404846,1.03017528619447,0.962757628775446,0.758091635291392,1.52087579934144,0.565879024158229,1.12369808963859,0.512201219238954,1.03383844120104,0,0.927074607558844,1.73618298417335,2.47251540481984,0.735994600671987,0.685738504770831,0.887379030796687,2.14592570952589,0.726732083161643,0.658765662907314,1.4384483341585,1.82927972872773,0.526139422875686,0.950628796921032,0.561142271657738,0.949080144993393,1.0835493061312,1.63692417267876,1.70430525304563,2.12197272079256,2.49810577937946,1.40358965067245,2.79332370262788,2.48674831689496,3.75005412503176,2.31867835620421
|phase1_expression=3.52327463630547,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02051948181284,0.0992909512008853,0,0,0,0,0.430761996159075,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.5394599909254,5.67710814829281,9.54443111240744,7.82391344348039,7.19483016055474,7.24964403023757,4.6663175777828,2.09979632438044,1.43752564364972,0,0,0,11.0621557495457,10.3152038377952,6.70373719960675,0,0,0,5.76035704517525,1.77858959222228,2.6996991518442,2.96659908770092,0.7104801149461,2.99600110518405,3.45796474789399,0.933206510776299,1.62007125998029,1.47227472945967,0.285650984403804,0.441737081903227,0.367472397644862,0.287536413054709,0,0,0.127687338085188,0,0,0.274462930807229,0,0.279182999001381,0,0.45839474333043,0,0,0.186399445825301,0.302904773332736,2.56943304363071,0,0.860423876981386,0,0,0,0,0.561777680527007,3.06774580640504,1.55871602761721,3.18005617059306,1.69012103732017,0,2.54805239706646,0,0,0,0,0.22836775943812,0,1.1875371125186,0.693941307064543,0.608930956624282,0.461230994512117,0.452167921657868,1.88141931417128,1.25666591329675,0,1.15679485535929,0,2.10296904931632,2.20841518460394,0.969750506270444,0,0.292780797011547,0.209446706813455,0,0,0,0,0.149790639404823,0.457500602818626,0.502617408451458,0.347648640384553,0.255715457330331,0.41557608911912,0,3.66621709861139,1.49288364732112,0,0.210441855886474,0.260240885925407,1.37941262660084,1.26043490863744,0.90422890701429,1.36072998302656,1.15302348256365,1.96773621575431,0.776110112217047,1.29340795759705,0.567318240503458,1.58356011747554,2.19195732427575,3.61461423993277,2.089512999133,2.67516777330327,0.995171334092466,0,0,0,0.621377317606506,0.938104239924385,1.08037236876609,2.60419209143731,2.55793501271625,1.54267112887378,1.39520366850245,1.60964040839772,2.45207218971056,4.27855609775049,3.61168420974009,2.83740833410495,3.80119967305864,2.19550115291051,2.54992195644706,0.210289948564127,1.44066457330998,0,0.793351699990633,0.853153002140936,0.696710015581316,0.515469845288373,0.80673409849337,0.444756087689741,1.14135375667535,0.474529061544512,1.15289268306808,0.502670417600539,1.1937388322469,0.38992817423824,0.898819408654221,0.864552199498777,1.39398891278057,0.948339504765408,1.14248512609729,0,0.203651327845314,1.16371492300575,0.841629838683823,1.20149420536089,0.147610147979602,0.941992367048249,0.493588655687202,0.296452627087149,0.166845105716094,0.196558995113203,0,0.405720242777006,0,0.25462585178142,0.575392274901621,0.324270453550071,0.274561413188081,0,0.372140947668503,0.312037673114561,0,0,0,3.51031061316549,0.568474235311454,1.95557971730431,1.35796068620151,0.469380496577004,1.84256883185997,3.09456733151818,6.43941037930736,5.67486518782288,6.2010113101657,10.2051051940792,3.4411296090305,7.42545422023351,6.36455857758651,0,0,0.491764273019036,0.551873492609465,0.481651769963376,0.117211686592203,10.6557714494839,3.02965112645248,0,0.390438744296638,0.215423397732799,0,0,0,0.404810701674894,0,0,0.321321316421807,1.98716119291576,2.13678724400706,4.39794790254655,2.8044920905331,2.65490276679926,0.485561272309963,0.906970670894253,0.188605079755898,2.06711325016541,1.22974059177571,0.775284879504663,0.363533729477506,0.712994756769443,0.632073515871632,0,0,15.3197822589205,1.62054984628179,0.388076051348264,1.92903331528433,13.1231772895282,12.8425548673491,8.22745103010605,10.656273219011,0,0.42366414172764,0,0.49465875882444,4.19807509409354,2.17126529741361,1.90995750405018,1.14898629821543,0,0.18542530201051,0.512612642393558,1.03193433981611,1.11116716421827,0.565105371014073,0,0.457556346413045,0.169978429993855,0,0,0.954670618015114,0.790839983952838,1.01659733563424,1.08005340821801,1.46361807210128,1.74690050996942,3.2367443132357,3.2234847732881,3.14107130380836,0.648074866458964,1.24267862617385,0,0.448549638131936,1.15820943319968,1.55560950675238,1.29159823477731,1.18269287843545,1.64300134104056,1.69265700297135,1.25831213310853,0,0.576060012515731,0.316011120628178,0.608175645870493,0.616265742988964,0.129920822977795,0.358053391334963,0.39736270956253,0,0.147689527174577,0.100966449948148,0,0.302478555410522,0,0,0,0.906921534460845,0,0,0,4.25017106870819,7.50729901804728,2.01466786693992,2.14368379079066,0,0,0,0,0,0,0,0,0,0.453142408984205,0,0.103787347584177,0.399024873401031,0.341467211508268,1.45864030240976,0.209613162627982,0.735374033800057,0.666740183404846,1.03017528619447,0.962757628775446,0.758091635291392,1.52087579934144,0.565879024158229,1.12369808963859,0.512201219238954,1.03383844120104,0,0.927074607558844,1.73618298417335,2.47251540481984,0.735994600671987,0.685738504770831,0.887379030796687,2.14592570952589,0.726732083161643,0.658765662907314,1.4384483341585,1.82927972872773,0.526139422875686,0.950628796921032,0.561142271657738,0.949080144993393,1.0835493061312,1.63692417267876,1.70430525304563,2.12197272079256,2.49810577937946,1.40358965067245,2.79332370262788,2.48674831689496,3.75005412503176,2.31867835620421
|short_description=p3@Loxl1
|short_description=p3@Loxl1
}}
}}

Latest revision as of 22:15, 26 September 2015

Short description:p3@Loxl1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Loxl1_5end
Coexpression cluster:NA
Association with transcript: 17bp_to_ENSMUST00000167425_5end
EntrezGene:Loxl1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Loxl1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G73.52
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.02
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.10
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.43
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D85.54
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D95.68
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B39.54
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B77.82
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C27.19
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B87.25
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C34.67
Mouse Astrocytes, donor2.CNhs12078.11552-120C42.10
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C111.06
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E110.32
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C56.70
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C65.76
Mouse Meningeal cells, donor3.CNhs12109.11639-122D11.78
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C72.70
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E72.97
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.71
Mouse Microglia, donor1.CNhs12629.11718-123C83.00
Mouse Microglia, donor2.CNhs12634.11736-123E83.46
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.93
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.62
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.47
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.29
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.44
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.37
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.29
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.13
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.27
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.28
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.46
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.00
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.19
Mouse Schwann, donor1.CNhs12507.11728-123D90.30
Mouse Schwann, donor2.CNhs12573.11746-123F92.57
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.56
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I73.07
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E31.56
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I83.18
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.69
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I82.55
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.23
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D71.19
adrenal gland, embryo E14.CNhs11038.406-44C50.69
adrenal gland, embryo E16.CNhs11004.1254-43D60.61
adrenal gland, embryo E17.CNhs11043.1263-45I10.46
adrenal gland, embryo E18.CNhs11026.1262-18F50.45
adrenal gland, neonate N00.CNhs11191.1311-23C11.88
adrenal gland, neonate N25.CNhs11223.1377-27I31.26
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H11.16
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F52.10
bone (os femoris), neonate N16.CNhs11225.1525-43A62.21
bone (os femoris), neonate N20.CNhs11195.1350-25C30.97
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.29
cerebellum, neonate N30.CNhs11135.1395-42I20.21
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A40.15
corpus striatum, adult.CNhs10487.19-21D80.46
corpus striatum, neonate N00.CNhs11226.630-43F10.50
cortex, adult.CNhs10473.12-14D50.35
cortex, neonate N30.CNhs11107.1392-42F20.26
diencephalon, adult.CNhs10482.20-12F20.42
diencephalon, neonate N30.CNhs11201.1388-42B20.00
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B13.67
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.49
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.21
eyeball, embryo E12.CNhs11016.345-16C60.26
eyeball, embryo E14.CNhs10521.399-16E21.38
eyeball, embryo E15.CNhs10593.426-16C91.26
eyeball, embryo E17.CNhs11023.1261-18D40.90
eyeball, neonate N00.CNhs11207.633-15C61.36
eyeball, neonate N01.CNhs11140.1532-43E71.15
eyeball, neonate N02.CNhs11205.1551-44G81.97
eyeball, neonate N16.CNhs11188.777-19A20.78
forelimb, embryo E11.CNhs10596.335-25E21.29
forelimb, embryo E12.CNhs10600.359-14H20.57
forelimb, embryo E13.CNhs10589.384-1E21.58
forelimb, embryo E14.CNhs10577.413-26A82.19
forelimb, embryo E15.CNhs11007.437-20E73.61
forelimb, embryo E17.CNhs10598.1517-43C42.09
forelimb, embryo E18.CNhs11008.1520-43B52.68
gonad, embryo E13.CNhs11044.1564-45I61.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.62
heart, embryo E12.CNhs11015.353-12F50.94
heart, embryo E13.CNhs11013.376-3I91.08
heart, embryo E14.CNhs10597.403-26D42.60
heart, embryo E15.CNhs11017.431-16C82.56
heart, embryo E16.CNhs11021.457-17C61.54
heart, embryo E17.CNhs11025.479-18E51.40
heart, embryo E18.CNhs11030.1283-20G31.61
heart, neonate N00.CNhs11213.639-21E32.45
heart, neonate N03.CNhs11221.1349-25I24.28
heart, neonate N10.CNhs11118.749-24G13.61
heart, neonate N16.CNhs11209.782-15G12.84
heart, neonate N20.CNhs11127.821-26I63.80
heart, neonate N25.CNhs11196.1351-25D32.20
heart, neonate N30.CNhs11202.1390-42D22.55
hippocampus, adult.CNhs10478.13-16E80.21
hippocampus, neonate N00.CNhs11228.627-43G11.44
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.79
intestine, embryo E12.CNhs11019.1251-16I50.85
intestine, embryo E13.CNhs11010.381-16D50.70
intestine, embryo E15.CNhs10602.976-16D80.52
intestine, embryo E16.CNhs10585.463-22H40.81
intestine, embryo E17.CNhs10582.482-18D30.44
intestine, embryo E18.CNhs10526.1289-20F71.14
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E91.15
intestine, neonate N06.CNhs11102.688-20B80.50
intestine, neonate N07.CNhs11095.720-20F21.19
intestine, neonate N10.CNhs11098.755-23A50.39
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E30.86
intestine, neonate N30.CNhs11131.1384-42G11.39
kidney, embryo E14.CNhs10606.411-4I90.95
kidney, embryo E15.CNhs10997.434-16F81.14
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C71.16
kidney, neonate N00.CNhs11214.646-21G70.84
kidney, neonate N10.CNhs11206.758-6D51.20
kidney, neonate N20.CNhs11113.832-19I10.15
kidney, neonate N25.CNhs11122.1353-25F30.94
kidney, neonate N30.CNhs11203.1385-42H10.49
liver, adult pregnant day01.CNhs10466.508-5B20.30
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.41
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G40.58
liver, neonate N00.CNhs11117.641-24F40.32
liver, neonate N03.CNhs11123.1345-25G20.27
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.37
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B13.51
lung, embryo E12.CNhs10522.354-16G20.57
lung, embryo E14.CNhs10604.404-26F81.96
lung, embryo E15.CNhs11020.432-17C51.36
lung, embryo E16.CNhs10998.458-17B60.47
lung, embryo E17.CNhs10605.480-44A61.84
lung, embryo E18.CNhs10583.1287-20I63.09
lung, neonate N00.CNhs11224.640-42C66.44
lung, neonate N06.CNhs11212.683-20E55.67
lung, neonate N07.CNhs11111.715-19A36.20
lung, neonate N10.CNhs11219.750-23E610.21
lung, neonate N20.CNhs11109.822-18A43.44
lung, neonate N25.CNhs11119.1359-25C77.43
lung, neonate N30.CNhs11133.1394-42H26.36
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H20.55
medulla oblongata, adult.CNhs10477.17-12C20.48
medulla oblongata, neonate N30.CNhs11200.1396-42A30.12
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C710.66
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C23.03
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.22
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.32
ovary, adult.CNhs10507.91-2I71.99
ovary, embryo E18.CNhs11040.505-44H72.14
ovary, neonate N00.CNhs11217.1299-22I44.40
oviduct, adult pregnant day01.CNhs10500.988-6G62.80
pancreas, adult.CNhs10486.34-16E42.65
pancreas, embryo E14.CNhs11012.405-44F40.49
pancreas, embryo E15.CNhs11042.1556-45F20.91
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G32.07
pancreas, embryo E18.CNhs10580.1535-43I71.23
pancreas, neonate N00.CNhs11105.645-26G90.78
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D80.71
pancreas, neonate N16.CNhs11136.787-43B60.63
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G815.32
pituitary gland, embryo E12.CNhs11018.346-16E61.62
pituitary gland, embryo E13.CNhs11009.370-44C70.39
pituitary gland, embryo E14.CNhs11037.398-44A51.93
pituitary gland, embryo E15.CNhs10592.427-16B913.12
pituitary gland, embryo E16.CNhs11036.449-43F612.84
pituitary gland, embryo E17.CNhs11039.1265-44F58.23
pituitary gland, neonate N00.CNhs11190.1308-22E910.66
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.42
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.49
skin, neonate N00.CNhs11124.650-25G44.20
skin, neonate N03.CNhs11215.662-22H32.17
skin, neonate N06.CNhs11097.693-20I51.91
skin, neonate N10.CNhs11108.762-6C41.15
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C90.19
spleen, adult.CNhs10465.25-2G20.51
spleen, embryo E16.CNhs11035.461-43C11.03
spleen, embryo E18.CNhs11011.1271-21F21.11
spleen, neonate N10.CNhs11116.752-24D10.57
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.46
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.17
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E30.79
stomach, embryo E15.CNhs10603.1252-16G81.02
stomach, embryo E16.CNhs11022.459-17D41.08
stomach, embryo E17.CNhs11006.1035-18D51.46
stomach, embryo E18.CNhs10999.1286-20C61.75
stomach, neonate N03.CNhs11193.1340-24B83.24
stomach, neonate N07.CNhs11210.718-18A93.22
stomach, neonate N25.CNhs11104.1355-25E43.14
stomach, neonate N30.CNhs11134.1386-42I10.65
submandibular gland, adult.CNhs10469.59-29C11.24
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.45
testis, embryo E15.CNhs11034.443-27C51.16
testis, embryo E16.CNhs11033.470-26G51.56
testis, embryo E17.CNhs11029.486-18I51.29
testis, embryo E18.CNhs11027.503-18G51.18
testis, neonate N00.CNhs11189.1300-22B71.64
testis, neonate N07.CNhs11222.726-26I41.69
testis, neonate N10.CNhs11204.763-44D91.26
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.58
thymus, adult.CNhs10471.38-12B50.32
thymus, embryo E14.CNhs11041.402-44I40.61
thymus, embryo E15.CNhs11005.430-45I20.62
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.36
thymus, embryo E18.CNhs10595.1273-19G40.40
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.10
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.30
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.91
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E44.25
uterus, adult pregnant day19.CNhs10497.590-15F57.51
uterus, adult.CNhs10509.92-27E52.01
vagina, adult.CNhs10502.89-27D52.14
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.00
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.45
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.10
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H20.34
whole body, embryo E14.5.CNhs10578.420-27D21.46
whole body, embryo E14.CNhs10519.395-14B10.21
whole body, embryo E16.CNhs10514.453-14F20.74
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.52
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.57
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.93
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.74
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.47
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.74
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G52.15
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.73
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.66
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.44
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.83
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.08
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.64
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.70
whole body, embryo E17.5.CNhs10513.490-9F92.12
whole body, embryo E17.CNhs10517.475-3I52.50
whole body, embryo E18.CNhs10516.493-3B31.40
whole body, neonate N00.CNhs10525.657-19C22.79
whole body, neonate N01.CNhs10576.659-23C62.49
whole body, neonate N06.CNhs10515.692-21D13.75
whole body, neonate N10.CNhs10518.761-6B42.32





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
cardiovascular system2.84e-0923
circulatory system2.84e-0923
primary circulatory organ9.03e-0818
heart9.03e-0818
primitive heart tube9.03e-0818
primary heart field9.03e-0818
anterior lateral plate mesoderm9.03e-0818
heart tube9.03e-0818
heart primordium9.03e-0818
cardiac mesoderm9.03e-0818
cardiogenic plate9.03e-0818
heart rudiment9.03e-0818
splanchnic layer of lateral plate mesoderm6.26e-0733
lung7.00e-0714
respiratory tube7.00e-0714
respiration organ7.00e-0714
pair of lungs7.00e-0714
lung primordium7.00e-0714
lung bud7.00e-0714
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr9:58160962..58160973,-&oldid=4277191"