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FFCP PHASE1:Mm9::chr4:3605255..3605281,+: Difference between revisions

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{{FFCP|EntrezGene=17096,666513|HGNC=|MCL_coexpression_id=165|UniProt=P25911,Q3TCS3,Q8CEI0,Q3U6Q5,Q05DV0|association_with_transcript=0bp_to_ENSMUST00000041377,ENSMUST00000103010,ENSMUST00000145083,NM_001111096,NM_010747,uc008rwk.2,uc008rwl.2,uc008rwm.2_5end|description=CAGE_peak_1_at_Gm11787_5end,CAGE_peak_1_at_Lyn_5end|id=chr4:3605255..3605281,+|ontology_enrichment_celltype=CL:0000049!2.64e-07!19|ontology_enrichment_celltype_v019_2=CL:0000049,2.64e-07,19|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0009569!7.05e-10!66;UBERON:0004923!2.58e-08!24;UBERON:0004119!8.24e-08!130;UBERON:0000925!8.24e-08!130;UBERON:0006595!8.24e-08!130;UBERON:0002371!9.80e-08!16;UBERON:0001007!1.16e-07!128;UBERON:0001555!1.16e-07!128;UBERON:0007026!1.16e-07!128;UBERON:0001474!4.07e-07!22;UBERON:0004765!4.07e-07!22;UBERON:0001434!4.07e-07!22;UBERON:0004921!4.64e-07!126;UBERON:0004185!4.64e-07!126;UBERON:0000926!4.96e-07!193;UBERON:0004120!4.96e-07!193;UBERON:0006603!4.96e-07!193;UBERON:0005172!7.69e-07!49;UBERON:0005173!7.69e-07!49;UBERON:0002417!7.69e-07!49;UBERON:0000916!7.69e-07!49;UBERON:0005177!8.16e-07!85|ontology_enrichment_uberon_v019_2=UBERON:0009569,7.05e-10,66;UBERON:0005177,4.65e-09,79;UBERON:0002100,5.39e-09,90;UBERON:0004923,2.58e-08,24;UBERON:0004119,7.12e-08,118;UBERON:0000925,7.12e-08,118;UBERON:0006595,7.12e-08,118;UBERON:0002371,9.80e-08,16;UBERON:0001007,9.91e-08,116;UBERON:0001555,9.91e-08,116;UBERON:0007026,9.91e-08,116;UBERON:0004921,4.05e-07,114;UBERON:0001474,4.07e-07,22;UBERON:0004765,4.07e-07,22;UBERON:0001434,4.07e-07,22;UBERON:0005172,7.69e-07,49;UBERON:0005173,7.69e-07,49;UBERON:0002417,7.69e-07,49;UBERON:0000916,7.69e-07,49|phase1_expression=4.80446541314382,113.068032075153,124.214792353343,62.307627529207,53.0949473743128,80.749929789619,74.5224323499727,1.29123323441576,0.84473233291,0.468129052643987,0.171217968225505,0,0,0.611942816932982,126.581709489952,128.774270059929,51.0680171033547,470.511819631812,473.730368107827,465.131058370641,25.7681169157741,84.8937632767569,112.315909329742,88.4758098047539,75.0168349089646,101.639057648359,91.7523051818829,85.9730218416697,44.4654801527915,54.438508028145,55.8760886851368,29.8464416526027,31.3683041668131,15.8481681015439,23.108129580102,18.7845149255096,17.9669033510885,490.937602854393,468.019871369756,447.089277353624,612.348979040286,588.102162549222,506.872808564524,7.42791226055906,4.76471576731718,4.22157529971868,8.60630478782843,7.63088047331563,8.34807494390993,13.6100929351998,8.67915814077248,5.75010257459886,465.428949204161,5.80289713609076,7.73015738027667,26.2404624756666,18.9112070359579,27.8462929829819,3.43937983461316,3.1739458756322,6.97214543856797,6.43804610931351,6.22506357277798,81.8908742726073,98.8866362566974,78.152812644071,23.9680088414724,13.4476406862544,3.94020526772215,3.24014251996058,5.04779907243317,4.57041575046086,5.96345060569357,3.1847607795888,3.64212789869298,5.51531271966013,4.40463523997555,5.36286819957788,5.22262213071228,3.16527090552465,4.66586982372289,6.77187381723788,5.58365998002762,6.19038871034848,7.02871939773326,8.2496003932627,9.11178757114259,5.77838282058432,6.81535739998656,7.25486977025141,94.2059588280453,52.4858564958646,76.8367607089758,12.9528765993076,34.4381501247265,32.2579358710082,32.1617722101712,3.2381761289831,3.63700406444016,5.3000936176551,2.81686839553361,20.5322363862909,2.54805239706646,14.2213340630666,11.9070072556168,13.1747130047051,16.1767822404731,35.5111865926277,326.779609162731,28.797774978576,20.1242979048718,28.3152894830291,29.9800146432876,28.4865790644457,35.04143472644,29.5316489624737,50.6749683855466,38.1742302268567,112.345540097634,40.1181787869575,84.8031430887911,87.27754556434,11.1835056730873,13.4679166625312,16.546289838263,63.8642638021478,88.3037467608632,75.5877441051694,91.1093528113874,4.79330046095433,10.0650132620098,3.39266750704734,7.64827008846016,7.92717917724025,8.3115217823824,8.11206315338788,21.895463227818,98.4059137525836,10.867078612648,15.7831391914855,8.06746746368763,4.82794419310293,5.76198815377118,9.19299388797862,10.0013653752452,6.53379973452734,8.05834831213668,18.3679393224701,7.54487975264948,7.18603104637713,7.38994721488585,12.9325482132269,8.61946472599353,11.8405736617537,16.6683530490434,11.7430217422911,100.416485785793,85.6968530692001,72.1775288464805,14.2916783049496,12.4298811789981,19.2666405763286,17.992599904476,24.9890574319203,21.9059300300077,24.4160641987928,23.6080593231665,32.343999835706,30.4435722339939,41.6985358760902,43.6150195356704,38.0119967305864,57.0830299756732,48.7169300100149,6.51898840548794,9.05560588937703,102.099403941994,35.1719253662514,8.95810652247983,9.98617688999886,15.5929628199733,28.4373769718913,38.4714015851626,32.7188076913602,46.0293189698176,36.2337700392824,34.1815883968367,30.4403402222961,36.0683561170372,44.9409704327111,39.7694011769437,45.8024928485045,10.4317345524195,13.3670759753383,13.5249282807697,19.75417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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=17096,666513
|HGNC=
|MCL_coexpression_id=165
|TSSclassifier=NA
|UniProt=P25911,Q3TCS3,Q8CEI0,Q3U6Q5,Q05DV0
|association_with_transcript=0bp_to_ENSMUST00000041377,ENSMUST00000103010,ENSMUST00000145083,NM_001111096,NM_010747,uc008rwk.2,uc008rwl.2,uc008rwm.2_5end
|cluster_id=chr4:3605255..3605281,+
|description=CAGE_peak_1_at_Gm11787_5end,CAGE_peak_1_at_Lyn_5end
|id=chr4:3605255..3605281,+
|ontology_enrichment_celltype=CL:0000049!2.64e-07!19
|ontology_enrichment_celltype_v019_2=CL:0000049,2.64e-07,19
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0009569!7.05e-10!66;UBERON:0004923!2.58e-08!24;UBERON:0004119!8.24e-08!130;UBERON:0000925!8.24e-08!130;UBERON:0006595!8.24e-08!130;UBERON:0002371!9.80e-08!16;UBERON:0001007!1.16e-07!128;UBERON:0001555!1.16e-07!128;UBERON:0007026!1.16e-07!128;UBERON:0001474!4.07e-07!22;UBERON:0004765!4.07e-07!22;UBERON:0001434!4.07e-07!22;UBERON:0004921!4.64e-07!126;UBERON:0004185!4.64e-07!126;UBERON:0000926!4.96e-07!193;UBERON:0004120!4.96e-07!193;UBERON:0006603!4.96e-07!193;UBERON:0005172!7.69e-07!49;UBERON:0005173!7.69e-07!49;UBERON:0002417!7.69e-07!49;UBERON:0000916!7.69e-07!49;UBERON:0005177!8.16e-07!85
|ontology_enrichment_uberon_v019_2=UBERON:0009569,7.05e-10,66;UBERON:0005177,4.65e-09,79;UBERON:0002100,5.39e-09,90;UBERON:0004923,2.58e-08,24;UBERON:0004119,7.12e-08,118;UBERON:0000925,7.12e-08,118;UBERON:0006595,7.12e-08,118;UBERON:0002371,9.80e-08,16;UBERON:0001007,9.91e-08,116;UBERON:0001555,9.91e-08,116;UBERON:0007026,9.91e-08,116;UBERON:0004921,4.05e-07,114;UBERON:0001474,4.07e-07,22;UBERON:0004765,4.07e-07,22;UBERON:0001434,4.07e-07,22;UBERON:0005172,7.69e-07,49;UBERON:0005173,7.69e-07,49;UBERON:0002417,7.69e-07,49;UBERON:0000916,7.69e-07,49
|phase1_expression=4.80446541314382,113.068032075153,124.214792353343,62.307627529207,53.0949473743128,80.749929789619,74.5224323499727,1.29123323441576,0.84473233291,0.468129052643987,0.171217968225505,0,0,0.611942816932982,126.581709489952,128.774270059929,51.0680171033547,470.511819631812,473.730368107827,465.131058370641,25.7681169157741,84.8937632767569,112.315909329742,88.4758098047539,75.0168349089646,101.639057648359,91.7523051818829,85.9730218416697,44.4654801527915,54.438508028145,55.8760886851368,29.8464416526027,31.3683041668131,15.8481681015439,23.108129580102,18.7845149255096,17.9669033510885,490.937602854393,468.019871369756,447.089277353624,612.348979040286,588.102162549222,506.872808564524,7.42791226055906,4.76471576731718,4.22157529971868,8.60630478782843,7.63088047331563,8.34807494390993,13.6100929351998,8.67915814077248,5.75010257459886,465.428949204161,5.80289713609076,7.73015738027667,26.2404624756666,18.9112070359579,27.8462929829819,3.43937983461316,3.1739458756322,6.97214543856797,6.43804610931351,6.22506357277798,81.8908742726073,98.8866362566974,78.152812644071,23.9680088414724,13.4476406862544,3.94020526772215,3.24014251996058,5.04779907243317,4.57041575046086,5.96345060569357,3.1847607795888,3.64212789869298,5.51531271966013,4.40463523997555,5.36286819957788,5.22262213071228,3.16527090552465,4.66586982372289,6.77187381723788,5.58365998002762,6.19038871034848,7.02871939773326,8.2496003932627,9.11178757114259,5.77838282058432,6.81535739998656,7.25486977025141,94.2059588280453,52.4858564958646,76.8367607089758,12.9528765993076,34.4381501247265,32.2579358710082,32.1617722101712,3.2381761289831,3.63700406444016,5.3000936176551,2.81686839553361,20.5322363862909,2.54805239706646,14.2213340630666,11.9070072556168,13.1747130047051,16.1767822404731,35.5111865926277,326.779609162731,28.797774978576,20.1242979048718,28.3152894830291,29.9800146432876,28.4865790644457,35.04143472644,29.5316489624737,50.6749683855466,38.1742302268567,112.345540097634,40.1181787869575,84.8031430887911,87.27754556434,11.1835056730873,13.4679166625312,16.546289838263,63.8642638021478,88.3037467608632,75.5877441051694,91.1093528113874,4.79330046095433,10.0650132620098,3.39266750704734,7.64827008846016,7.92717917724025,8.3115217823824,8.11206315338788,21.895463227818,98.4059137525836,10.867078612648,15.7831391914855,8.06746746368763,4.82794419310293,5.76198815377118,9.19299388797862,10.0013653752452,6.53379973452734,8.05834831213668,18.3679393224701,7.54487975264948,7.18603104637713,7.38994721488585,12.9325482132269,8.61946472599353,11.8405736617537,16.6683530490434,11.7430217422911,100.416485785793,85.6968530692001,72.1775288464805,14.2916783049496,12.4298811789981,19.2666405763286,17.992599904476,24.9890574319203,21.9059300300077,24.4160641987928,23.6080593231665,32.343999835706,30.4435722339939,41.6985358760902,43.6150195356704,38.0119967305864,57.0830299756732,48.7169300100149,6.51898840548794,9.05560588937703,102.099403941994,35.1719253662514,8.95810652247983,9.98617688999886,15.5929628199733,28.4373769718913,38.4714015851626,32.7188076913602,46.0293189698176,36.2337700392824,34.1815883968367,30.4403402222961,36.0683561170372,44.9409704327111,39.7694011769437,45.8024928485045,10.4317345524195,13.3670759753383,13.5249282807697,19.7541788009955,22.8863934857798,24.7579444212825,30.227064745395,21.9939120489607,23.3928104483648,21.2243121945497,41.5033677922008,23.8588501174014,22.9974024282448,28.7823503852613,30.6318783296639,35.9353968031101,42.5225172474971,63.86854251408,73.7715281826411,41.1842119782122,66.1333750025831,55.8211421502755,60.5353085842248,50.5157755894223,35.7000852908605,33.2886029740723,122.306611890292,10.6115190591471,21.6743418667894,30.2146252679835,35.9076079881408,43.2166144199885,72.3652668293482,75.1264544252525,117.438182359112,105.860121652114,123.577445709553,119.620219742489,120.534117342395,92.8646956093304,174.917889369556,367.680242261448,39.8329061145419,56.0151594998607,6.26147300952389,8.67366480782304,0.819674726883377,32.3162786821597,7.57219726599016,5.46614242015294,3.66219776145758,5.01834475700359,2.22798674082394,2.83076530788832,2.42886421004937,5.84511715822624,4.34816555741176,24.7417413644791,31.2268187458191,14.0671826897132,17.7546785695398,53.1203795971564,22.5666735177937,13.352934988524,14.8138542912728,13.3909606626688,15.651000322681,21.5204603560749,34.3709629913734,22.9026249570828,25.3113138653152,26.8631244245444,22.1379078007497,27.8465966770104,13.2771446243977,7.92268813737765,8.27895576209629,12.2172109968008,12.5911565886014,14.9829806785739,13.8221177305782,17.9634319977614,32.6193674208557,21.3950391572458,13.2317038832977,15.8290802823821,25.0269861378654,18.9382584274409,10.3853939282729,11.1615811826642,45.1795296776269,9.82754100655701,184.540551261681,78.0142360900981,101.671795525972,87.9680694211907,140.384971869493,145.960474505761,58.8125367778739,64.65757097353,68.6853869807986,17.184071124272,9.17374381385292,13.6224042974989,15.5527690783394,14.0089158329694,19.652630737156,18.7461441474901,27.5236007565369,29.0549095602273,24.4972299521489,36.0376801590417,1.69107881605257,6.42921147989109,8.27292452285488,7.77804753376191,8.78286799648571,10.8131920314098,10.6795087167636,11.5881902511116,3.77493639932559,1.93267296660805,7.77681016896237,25.2808896502543,21.2861476054672,19.001527075493,15.850340403291,16.2914293057408,15.2984643181574,11.8993495024769,11.2244040652679,13.4285378431036,9.75447125183998,10.7884018096419,16.4703818450182,13.3734459880058,12.5058285334279,12.2434407152214,20.2007217570399,29.605572681127,20.6498078127816,16.4211154927362,44.1053817310278,63.0041587479392,30.4403098292273,20.0628841614145,5.64751842617067,3.22227665555024,6.87474616127276,11.6860163993708,6.85082519770642,4.5323633843382,5.40018000185445,8.55610286126019,3.62513927187364,6.21312374102184,5.60451676954554,7.18244772121856,8.19521307619844,17.7467903459855,10.8998844566551,18.2005073365514,19.1132185909389,22.0457511245617,19.2551525755089,22.9954462705056,20.7853025909997,23.9555453560317,22.7548863151814,20.2959733123436,20.4470269481983,25.2435656380029,23.0609808630262,23.9207433374994,24.3130681473951,22.3742358604284,24.0008476669791,24.1367096376699,22.8898742349428,24.5635444108635,20.8922824522034,25.7228407990697,17.0123014771678,22.6239951836545,20.642225304571,31.9851094844911,23.2524635523381,22.3605174992529,21.2800142448238,24.0152103838247,18.9048478761519,13.4897712086491,24.3288872783225,23.6358159453128,27.1629431537758,33.9710785444054,42.895549589778
|short_description=p1@Gm11787,p1@Lyn
}}

Latest revision as of 22:34, 26 September 2015

Short description:p1@Gm11787, p1@Lyn
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Gm11787_5end, CAGE_peak_1_at_Lyn_5end
Coexpression cluster:MCL_coexpression_mm9:165
Association with transcript: 0bp_to_ENSMUST00000041377, ENSMUST00000103010, ENSMUST00000145083, NM_001111096, NM_010747, uc008rwk.2, uc008rwl.2, uc008rwm.2_5end
EntrezGene:17096,666513
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Gm11787p1@Lyn

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G74.80
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I5113.07
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I6124.21
CD326+ enterocyte, pool1.CNhs13542.11848-124I362.31
CD326+ enterocyte, pool2.CNhs13197.11849-124I453.09
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I780.75
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I874.52
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E91.29
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.84
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.47
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.17
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.61
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A1126.58
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A3128.77
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A551.07
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A2470.51
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A4473.73
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A6465.13
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A325.77
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H284.89
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I9112.32
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D188.48
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D275.02
GP2+ M cell, pool1.CNhs13228.11845-124H9101.64
GP2+ M cell, pool2.CNhs13231.11846-124I191.75
GP2+ M cell, pool3.CNhs13240.11847-124I285.97
Ileum epithelium, pool1.CNhs13199.10252-104B944.47
Ileum epithelium, pool2.CNhs13232.10253-104C154.44
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C855.88
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I329.85
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G631.37
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E915.85
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F523.11
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F618.78
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F717.97
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G8490.94
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H1468.02
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H3447.09
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G9612.35
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H2588.10
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H4506.87
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D87.43
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D94.76
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B34.22
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B78.61
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C27.63
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B88.35
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C313.61
Mouse Astrocytes, donor2.CNhs12078.11552-120C48.68
Mouse Astrocytes, donor3.CNhs12107.11633-122C45.75
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A2465.43
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I95.80
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A17.73
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C126.24
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E118.91
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C527.85
Mouse Granule cells, donor1.CNhs12131.11713-123C33.44
Mouse Granule cells, donor2.CNhs12357.11731-123E33.17
Mouse Granule cells, donor3.CNhs12108.11636-122C76.97
Mouse Meningeal cells, donor1.CNhs12132.11716-123C66.44
Mouse Meningeal cells, donor3.CNhs12109.11639-122D16.23
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C781.89
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E798.89
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D278.15
Mouse Microglia, donor1.CNhs12629.11718-123C823.97
Mouse Microglia, donor2.CNhs12634.11736-123E813.45
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D53.94
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F53.24
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D95.05
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F14.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D55.96
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D23.18
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F23.64
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D65.52
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D34.40
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F35.36
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D75.22
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D43.17
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F44.67
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D86.77
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E45.58
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E56.19
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I67.03
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D68.25
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F69.11
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E15.78
Mouse Schwann, donor1.CNhs12507.11728-123D96.82
Mouse Schwann, donor2.CNhs12573.11746-123F97.25
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G394.21
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F752.49
Mouse hepatocyte, donor1.CNhs13078.11714-123C476.84
Mouse hepatocyte, donor3.CNhs12615.11637-122C812.95
Mouse hepatocyte, donor6.CNhs13090.11822-124F434.44
Mouse hepatocyte, donor8.CNhs13091.11824-124F632.26
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A732.16
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I73.24
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E33.64
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I85.30
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G62.82
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H120.53
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I82.55
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B614.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G111.91
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G213.17
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G316.18
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B635.51
accessory axillary lymph node, adult.CNhs10475.1063-29H9326.78
adrenal gland, adult.CNhs10508.49-24D728.80
adrenal gland, embryo E14.CNhs11038.406-44C520.12
adrenal gland, embryo E16.CNhs11004.1254-43D628.32
adrenal gland, embryo E17.CNhs11043.1263-45I129.98
adrenal gland, embryo E18.CNhs11026.1262-18F528.49
adrenal gland, neonate N00.CNhs11191.1311-23C135.04
adrenal gland, neonate N25.CNhs11223.1377-27I329.53
amnion, adult pregnant day17.5.CNhs10488.583-22A850.67
aorta, adult.CNhs10498.46-23H138.17
bone (os femoris), adult.CNhs10483.56-12G2112.35
bone (os femoris), neonate N02.CNhs11227.1985-43F540.12
bone (os femoris), neonate N16.CNhs11225.1525-43A684.80
bone (os femoris), neonate N20.CNhs11195.1350-25C387.28
cecum, adult.CNhs10467.37-13H411.18
cerebellum, adult.CNhs10494.15-8B213.47
cerebellum, neonate N30.CNhs11135.1395-42I216.55
colon, adult.CNhs10468.36-18H763.86
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C788.30
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D175.59
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D491.11
corpora quadrigemina, adult.CNhs10501.16-22A44.79
corpus striatum, adult.CNhs10487.19-21D810.07
corpus striatum, neonate N00.CNhs11226.630-43F13.39
cortex, adult.CNhs10473.12-14D57.65
cortex, neonate N30.CNhs11107.1392-42F27.93
diencephalon, adult.CNhs10482.20-12F28.31
diencephalon, neonate N30.CNhs11201.1388-42B28.11
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B121.90
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A298.41
epididymis, adult.CNhs10490.58-23B210.87
eyeball, adult.CNhs10484.31-12G415.78
eyeball, embryo E12.CNhs11016.345-16C68.07
eyeball, embryo E14.CNhs10521.399-16E24.83
eyeball, embryo E15.CNhs10593.426-16C95.76
eyeball, embryo E17.CNhs11023.1261-18D49.19
eyeball, neonate N00.CNhs11207.633-15C610.00
eyeball, neonate N01.CNhs11140.1532-43E76.53
eyeball, neonate N02.CNhs11205.1551-44G88.06
eyeball, neonate N16.CNhs11188.777-19A218.37
forelimb, embryo E11.CNhs10596.335-25E27.54
forelimb, embryo E12.CNhs10600.359-14H27.19
forelimb, embryo E13.CNhs10589.384-1E27.39
forelimb, embryo E14.CNhs10577.413-26A812.93
forelimb, embryo E15.CNhs11007.437-20E78.62
forelimb, embryo E17.CNhs10598.1517-43C411.84
forelimb, embryo E18.CNhs11008.1520-43B516.67
gonad, embryo E13.CNhs11044.1564-45I611.74
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C8100.42
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D285.70
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D572.18
heart, embryo E11.CNhs10586.331-24E914.29
heart, embryo E12.CNhs11015.353-12F512.43
heart, embryo E13.CNhs11013.376-3I919.27
heart, embryo E14.CNhs10597.403-26D417.99
heart, embryo E15.CNhs11017.431-16C824.99
heart, embryo E16.CNhs11021.457-17C621.91
heart, embryo E17.CNhs11025.479-18E524.42
heart, embryo E18.CNhs11030.1283-20G323.61
heart, neonate N00.CNhs11213.639-21E332.34
heart, neonate N03.CNhs11221.1349-25I230.44
heart, neonate N10.CNhs11118.749-24G141.70
heart, neonate N16.CNhs11209.782-15G143.62
heart, neonate N20.CNhs11127.821-26I638.01
heart, neonate N25.CNhs11196.1351-25D357.08
heart, neonate N30.CNhs11202.1390-42D248.72
hippocampus, adult.CNhs10478.13-16E86.52
hippocampus, neonate N00.CNhs11228.627-43G19.06
intestinal mucosa, adult.CNhs10506.860-29I3102.10
intestine, adult.CNhs10496.178-9A335.17
intestine, embryo E12.CNhs11019.1251-16I58.96
intestine, embryo E13.CNhs11010.381-16D59.99
intestine, embryo E15.CNhs10602.976-16D815.59
intestine, embryo E16.CNhs10585.463-22H428.44
intestine, embryo E17.CNhs10582.482-18D338.47
intestine, embryo E18.CNhs10526.1289-20F732.72
intestine, neonate N00.CNhs11126.644-26D146.03
intestine, neonate N01.CNhs11192.1322-23E936.23
intestine, neonate N06.CNhs11102.688-20B834.18
intestine, neonate N07.CNhs11095.720-20F230.44
intestine, neonate N10.CNhs11098.755-23A536.07
intestine, neonate N20.CNhs11187.827-18D144.94
intestine, neonate N25.CNhs11121.1352-25E339.77
intestine, neonate N30.CNhs11131.1384-42G145.80
kidney, embryo E14.CNhs10606.411-4I910.43
kidney, embryo E15.CNhs10997.434-16F813.37
kidney, embryo E16.CNhs10584.464-22A513.52
kidney, embryo E17.CNhs11028.483-18I219.75
kidney, embryo E18.CNhs11001.1288-20C722.89
kidney, neonate N00.CNhs11214.646-21G724.76
kidney, neonate N10.CNhs11206.758-6D530.23
kidney, neonate N20.CNhs11113.832-19I121.99
kidney, neonate N25.CNhs11122.1353-25F323.39
kidney, neonate N30.CNhs11203.1385-42H121.22
liver, adult pregnant day01.CNhs10466.508-5B241.50
liver, embryo E12.CNhs10601.355-15F823.86
liver, embryo E13.CNhs10524.378-3H623.00
liver, embryo E14.CNhs10594.409-16E128.78
liver, embryo E15.CNhs10520.433-16D730.63
liver, embryo E16.CNhs10523.462-17F535.94
liver, embryo E17.CNhs10510.481-18A342.52
liver, embryo E18.CNhs10579.499-43G463.87
liver, neonate N00.CNhs11117.641-24F473.77
liver, neonate N03.CNhs11123.1345-25G241.18
liver, neonate N06.CNhs11101.684-20A866.13
liver, neonate N07.CNhs11103.716-20H255.82
liver, neonate N10.CNhs11115.751-24B960.54
liver, neonate N20.CNhs11220.823-25A350.52
liver, neonate N25.CNhs11198.1368-26H135.70
liver, neonate N30.CNhs11106.1382-42D133.29
lung, adult.CNhs10474.28-22B1122.31
lung, embryo E12.CNhs10522.354-16G210.61
lung, embryo E14.CNhs10604.404-26F821.67
lung, embryo E15.CNhs11020.432-17C530.21
lung, embryo E16.CNhs10998.458-17B635.91
lung, embryo E17.CNhs10605.480-44A643.22
lung, embryo E18.CNhs10583.1287-20I672.37
lung, neonate N00.CNhs11224.640-42C675.13
lung, neonate N06.CNhs11212.683-20E5117.44
lung, neonate N07.CNhs11111.715-19A3105.86
lung, neonate N10.CNhs11219.750-23E6123.58
lung, neonate N20.CNhs11109.822-18A4119.62
lung, neonate N25.CNhs11119.1359-25C7120.53
lung, neonate N30.CNhs11133.1394-42H292.86
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A1174.92
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A1367.68
mammary gland, adult lactating day02.CNhs10480.595-22B639.83
mammary gland, adult pregnant day19.CNhs10476.588-5H256.02
medulla oblongata, adult.CNhs10477.17-12C26.26
medulla oblongata, neonate N30.CNhs11200.1396-42A38.67
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.82
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C232.32
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E17.57
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E25.47
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E33.66
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D75.02
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D82.23
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D92.83
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D42.43
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D55.85
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D64.35
olfactory brain, adult.CNhs10489.18-22I924.74
ovary, adult.CNhs10507.91-2I731.23
ovary, embryo E18.CNhs11040.505-44H714.07
ovary, neonate N00.CNhs11217.1299-22I417.75
oviduct, adult pregnant day01.CNhs10500.988-6G653.12
pancreas, adult.CNhs10486.34-16E422.57
pancreas, embryo E14.CNhs11012.405-44F413.35
pancreas, embryo E15.CNhs11042.1556-45F214.81
pancreas, embryo E16.CNhs11003.460-26E513.39
pancreas, embryo E17.CNhs10599.1558-45G315.65
pancreas, embryo E18.CNhs10580.1535-43I721.52
pancreas, neonate N00.CNhs11105.645-26G934.37
pancreas, neonate N01.CNhs11138.1531-43D722.90
pancreas, neonate N02.CNhs11139.1539-43D825.31
pancreas, neonate N16.CNhs11136.787-43B626.86
pancreas, neonate N25.CNhs11094.1555-45E222.14
pancreas, neonate N30.CNhs11182.1548-44H527.85
pituitary gland, adult.CNhs10493.21-1G813.28
pituitary gland, embryo E12.CNhs11018.346-16E67.92
pituitary gland, embryo E13.CNhs11009.370-44C78.28
pituitary gland, embryo E14.CNhs11037.398-44A512.22
pituitary gland, embryo E15.CNhs10592.427-16B912.59
pituitary gland, embryo E16.CNhs11036.449-43F614.98
pituitary gland, embryo E17.CNhs11039.1265-44F513.82
pituitary gland, neonate N00.CNhs11190.1308-22E917.96
placenta, adult pregnant day10.CNhs10472.539-13I732.62
placenta, adult pregnant day17.CNhs10464.577-18G321.40
prostate, adult.CNhs10470.859-1F813.23
skin, adult.CNhs10492.30-1C315.83
skin, neonate N00.CNhs11124.650-25G425.03
skin, neonate N03.CNhs11215.662-22H318.94
skin, neonate N06.CNhs11097.693-20I510.39
skin, neonate N10.CNhs11108.762-6C411.16
small intestine, neonate N16.CNhs11114.790-21I145.18
spinal cord, adult.CNhs10505.24-13C99.83
spleen, adult.CNhs10465.25-2G2184.54
spleen, embryo E16.CNhs11035.461-43C178.01
spleen, embryo E18.CNhs11011.1271-21F2101.67
spleen, neonate N10.CNhs11116.752-24D187.97
spleen, neonate N20.CNhs11112.824-19H1140.38
spleen, neonate N25.CNhs11099.1354-25G3145.96
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C658.81
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C964.66
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D368.69
stomach, adult.CNhs10503.33-1H617.18
stomach, embryo E12.CNhs10588.356-43E39.17
stomach, embryo E15.CNhs10603.1252-16G813.62
stomach, embryo E16.CNhs11022.459-17D415.55
stomach, embryo E17.CNhs11006.1035-18D514.01
stomach, embryo E18.CNhs10999.1286-20C619.65
stomach, neonate N03.CNhs11193.1340-24B818.75
stomach, neonate N07.CNhs11210.718-18A927.52
stomach, neonate N25.CNhs11104.1355-25E429.05
stomach, neonate N30.CNhs11134.1386-42I124.50
submandibular gland, adult.CNhs10469.59-29C136.04
testis, adult.CNhs10504.57-7G51.69
testis, embryo E13.CNhs11031.389-23F56.43
testis, embryo E15.CNhs11034.443-27C58.27
testis, embryo E16.CNhs11033.470-26G57.78
testis, embryo E17.CNhs11029.486-18I58.78
testis, embryo E18.CNhs11027.503-18G510.81
testis, neonate N00.CNhs11189.1300-22B710.68
testis, neonate N07.CNhs11222.726-26I411.59
testis, neonate N10.CNhs11204.763-44D93.77
testis, neonate N20.CNhs11110.839-18H31.93
testis, neonate N30.CNhs11130.1391-42E27.78
thymus, adult.CNhs10471.38-12B525.28
thymus, embryo E14.CNhs11041.402-44I421.29
thymus, embryo E15.CNhs11005.430-45I219.00
thymus, embryo E16.CNhs11002.456-26C515.85
thymus, embryo E17.CNhs10581.478-18C116.29
thymus, embryo E18.CNhs10595.1273-19G415.30
thymus, neonate N02.CNhs11181.1541-43F811.90
thymus, neonate N03.CNhs11137.2104-43C711.22
thymus, neonate N06.CNhs11197.681-26C413.43
thymus, neonate N07.CNhs11211.713-19D39.75
thymus, neonate N10.CNhs11194.748-24E410.79
thymus, neonate N20.CNhs11186.820-7A216.47
thymus, neonate N25.CNhs11125.1362-25G713.37
thymus, neonate N30.CNhs11132.1393-42G212.51
tongue, adult.CNhs10499.32-1B412.24
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H320.20
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F729.61
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G520.65
urinary bladder, adult.CNhs10481.879-12E416.42
uterus, adult pregnant day19.CNhs10497.590-15F544.11
uterus, adult.CNhs10509.92-27E563.00
vagina, adult.CNhs10502.89-27D530.44
vesicular gland, adult.CNhs10491.51-27F820.06
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A15.65
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A23.22
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A36.87
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D711.69
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A46.85
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A54.53
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A65.40
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A78.56
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A83.63
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A96.21
whole body, embryo E11.CNhs11014.324-5I85.60
whole body, embryo E12.CNhs10587.857-27C97.18
whole body, embryo E13.CNhs10512.372-23H28.20
whole body, embryo E14.5.CNhs10578.420-27D217.75
whole body, embryo E14.CNhs10519.395-14B110.90
whole body, embryo E16.CNhs10514.453-14F218.20
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G519.11
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G522.05
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G519.26
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G523.00
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G520.79
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G523.96
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G522.75
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G520.30
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G520.45
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G525.24
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G523.06
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G523.92
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G524.31
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G522.37
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G524.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G524.14
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G522.89
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G524.56
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G520.89
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G525.72
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G517.01
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G522.62
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G520.64
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G531.99
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G523.25
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G522.36
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G521.28
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G524.02
whole body, embryo E17.5.CNhs10513.490-9F918.90
whole body, embryo E17.CNhs10517.475-3I513.49
whole body, embryo E18.CNhs10516.493-3B324.33
whole body, neonate N00.CNhs10525.657-19C223.64
whole body, neonate N01.CNhs10576.659-23C627.16
whole body, neonate N06.CNhs10515.692-21D133.97
whole body, neonate N10.CNhs10518.761-6B442.90





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
common myeloid progenitor2.64e-0719

Uber anatomy
Ontology termp-valuen
subdivision of trunk7.05e-1066
trunk region element4.65e-0979
trunk5.39e-0990
organ component layer2.58e-0824
endoderm-derived structure7.12e-08118
endoderm7.12e-08118
presumptive endoderm7.12e-08118
bone marrow9.80e-0816
digestive system9.91e-08116
digestive tract9.91e-08116
primitive gut9.91e-08116
subdivision of digestive tract4.05e-07114
bone element4.07e-0722
skeletal element4.07e-0722
skeletal system4.07e-0722
abdomen element7.69e-0749
abdominal segment element7.69e-0749
abdominal segment of trunk7.69e-0749
abdomen7.69e-0749
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