FFCP PHASE1:Mm9::chr17:86087581..86087588,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=20472 | |EntrezGene=20472 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=3122 | |||
|TSSclassifier=NA | |||
|UniProt=Q62232,Q8BSP4 | |UniProt=Q62232,Q8BSP4 | ||
|association_with_transcript=5bp_to_ENSMUST00000024947,ENSMUST00000163568,NM_011380,uc008duc.2_5end | |association_with_transcript=5bp_to_ENSMUST00000024947,ENSMUST00000163568,NM_011380,uc008duc.2_5end | ||
|cluster_id=chr17:86087581..86087588,- | |||
|description=CAGE_peak_2_at_Six2_5end | |description=CAGE_peak_2_at_Six2_5end | ||
|id=chr17:86087581..86087588,- | |id=chr17:86087581..86087588,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000007!3.60e-11!8;UBERON:0003296!3.60e-11!8;UBERON:0010133!3.60e-11!8;UBERON:0001894!1.83e-08!10;UBERON:0006222!1.83e-08!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000007,4.46e-42,8;UBERON:0003296,4.46e-42,8;UBERON:0010133,4.46e-42,8;UBERON:0001894,1.32e-33,10;UBERON:0006222,1.32e-33,10;UBERON:0003056,2.38e-08,49;UBERON:0002780,2.86e-08,39;UBERON:0001890,2.86e-08,39;UBERON:0006240,2.86e-08,39;UBERON:0003080,4.76e-08,40;UBERON:0002616,6.37e-07,46;UBERON:0000955,9.20e-07,47;UBERON:0006238,9.20e-07,47 | |||
|phase1_expression=0.640595388419176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194429899074283,0.979904951377538,0,0,0,0,0,0,0,0,0,0,0.338844532069132,0.889294796111139,0,0,0,0.898800331555214,0.768436610643109,0,0,0.210324961351382,0,0,0,0,0,0,0,0,0,0.0914876436024097,0,0,0,0,0,0,0,0,0.226714680320357,0,0,0,0,0,0,0.280888840263504,0,0,0,0.704217098883403,0,0,0,0.216491041011214,0.506719730950197,0,0.11418387971906,0,0,0.173485326766136,0,0,0,0,0,0,0,0,0.161766849947409,0.220841518460394,0,0,0,0,0,0,0,0,0.149790639404823,0,0,0,0,0,0,0,0,0,0,1.43132487258974,0.229902104433473,0.180062129805349,0.150704817835715,0.0680364991513279,0,0.187403449119458,0,0.646703978798527,0.378212160335639,1.40760899331159,0.657587197282725,0.278047249225598,0,0.205782136407943,0,0,0,0,0,0.234526059981096,0,0,0,0.154267112887378,0,0,0,0,0,0,0,0,0.134206418760372,0,0,0,0,0.426576501070468,0,0.128867461322093,0,0,0,0,0,0,0,0,0,0,0,1.70701110857774,1.5994791765362,0,0.814605311381257,0.775809948670503,1.05203729835478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195133647857799,0,0,0,0,0,0,0,0,0,0,0,0,0,0.504941854408746,0,0,0,0,0,0,0,0,0,0.642642632843614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,3.06103859853227,3.23396709456886,4.50107773566344,2.30542303734956,2.14042581122485,2.63278432963394,1.522324745573,0,0,0,0,0,0,0,0,0,0,0.170870880797853,0,0,0,0,0,0,0.139951452323658,0,0,1.58167996790568,0,0.108005340821801,0.209088296014469,0,0.134864346384821,0,0,0,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0,0,0.202725215290164,0.102710957164827,0.129920822977795,0,0,0,0,0,0,0,0,0,0,0,0,0.448569283047378,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.453142408984205,0,0.518936737920883,0.798049746802062,0.682934423016537,0.243106717068294,0.209613162627982,0.183843508450014,0,0.206035057238894,0.320919209591815,0,0,0.565879024158229,0.187283014939765,0,0.114870937911227,0,0.115884325944855,0.192909220463705,0,0.147198920134397,0.342869252385415,0,0,0,0.0941093804153306,0,0,0,0,0,0,0.197008964751127,0.409231043169689,0.464810523557898,0,0.249810577937946,0,0.214871054048298,0,0,0.231867835620421 | |phase1_expression=0.640595388419176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194429899074283,0.979904951377538,0,0,0,0,0,0,0,0,0,0,0.338844532069132,0.889294796111139,0,0,0,0.898800331555214,0.768436610643109,0,0,0.210324961351382,0,0,0,0,0,0,0,0,0,0.0914876436024097,0,0,0,0,0,0,0,0,0.226714680320357,0,0,0,0,0,0,0.280888840263504,0,0,0,0.704217098883403,0,0,0,0.216491041011214,0.506719730950197,0,0.11418387971906,0,0,0.173485326766136,0,0,0,0,0,0,0,0,0.161766849947409,0.220841518460394,0,0,0,0,0,0,0,0,0.149790639404823,0,0,0,0,0,0,0,0,0,0,1.43132487258974,0.229902104433473,0.180062129805349,0.150704817835715,0.0680364991513279,0,0.187403449119458,0,0.646703978798527,0.378212160335639,1.40760899331159,0.657587197282725,0.278047249225598,0,0.205782136407943,0,0,0,0,0,0.234526059981096,0,0,0,0.154267112887378,0,0,0,0,0,0,0,0,0.134206418760372,0,0,0,0,0.426576501070468,0,0.128867461322093,0,0,0,0,0,0,0,0,0,0,0,1.70701110857774,1.5994791765362,0,0.814605311381257,0.775809948670503,1.05203729835478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195133647857799,0,0,0,0,0,0,0,0,0,0,0,0,0,0.504941854408746,0,0,0,0,0,0,0,0,0,0.642642632843614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,3.06103859853227,3.23396709456886,4.50107773566344,2.30542303734956,2.14042581122485,2.63278432963394,1.522324745573,0,0,0,0,0,0,0,0,0,0,0.170870880797853,0,0,0,0,0,0,0.139951452323658,0,0,1.58167996790568,0,0.108005340821801,0.209088296014469,0,0.134864346384821,0,0,0,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0,0,0.202725215290164,0.102710957164827,0.129920822977795,0,0,0,0,0,0,0,0,0,0,0,0,0.448569283047378,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.453142408984205,0,0.518936737920883,0.798049746802062,0.682934423016537,0.243106717068294,0.209613162627982,0.183843508450014,0,0.206035057238894,0.320919209591815,0,0,0.565879024158229,0.187283014939765,0,0.114870937911227,0,0.115884325944855,0.192909220463705,0,0.147198920134397,0.342869252385415,0,0,0,0.0941093804153306,0,0,0,0,0,0,0.197008964751127,0.409231043169689,0.464810523557898,0,0.249810577937946,0,0.214871054048298,0,0,0.231867835620421 | ||
|short_description=p2@Six2 | |short_description=p2@Six2 | ||
}} | }} |
Latest revision as of 23:42, 26 September 2015
Short description: | p2@Six2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Six2_5end |
Coexpression cluster: | MCL_coexpression_mm9:3122 |
Association with transcript: | 5bp_to_ENSMUST00000024947, ENSMUST00000163568, NM_011380, uc008duc.2_5end |
EntrezGene: | Six2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pituitary gland | 4.46e-42 | 8 |
gland of diencephalon | 4.46e-42 | 8 |
neuroendocrine gland | 4.46e-42 | 8 |
diencephalon | 1.32e-33 | 10 |
future diencephalon | 1.32e-33 | 10 |
pre-chordal neural plate | 2.38e-08 | 49 |
regional part of forebrain | 2.86e-08 | 39 |
forebrain | 2.86e-08 | 39 |
future forebrain | 2.86e-08 | 39 |
anterior neural tube | 4.76e-08 | 40 |
regional part of brain | 6.37e-07 | 46 |
brain | 9.20e-07 | 47 |
future brain | 9.20e-07 | 47 |