FFCP PHASE1:Mm9::chr9:71440090..71440104,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr9:71440090..71440104,- to FFCP PHASE1:Mm9::chr9:71440090..71440104,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=102371 | |EntrezGene=102371 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1351 | |||
|TSSclassifier=NA | |||
|UniProt=E9PZ54,E9Q2N5,E9Q3C8,E9Q8U3,E9Q565 | |UniProt=E9PZ54,E9Q2N5,E9Q3C8,E9Q8U3,E9Q565 | ||
|association_with_transcript=-18bp_to_ENSMUST00000163998,ENSMUST00000164962,ENSMUST00000165936,ENSMUST00000166843,ENSMUST00000169573_5end | |||
|cluster_id=chr9:71440090..71440104,- | |||
|description=CAGE_peak_3_at_Gcom1_5end | |||
|id=chr9:71440090..71440104,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002048,2.69e-07,14;UBERON:0000117,2.69e-07,14;UBERON:0000171,2.69e-07,14;UBERON:0000170,2.69e-07,14;UBERON:0005597,2.69e-07,14;UBERON:0000118,2.69e-07,14;UBERON:0007100,4.49e-07,18;UBERON:0000948,4.49e-07,18;UBERON:0005498,4.49e-07,18;UBERON:0004140,4.49e-07,18;UBERON:0009881,4.49e-07,18;UBERON:0004141,4.49e-07,18;UBERON:0003084,4.49e-07,18;UBERON:0007005,4.49e-07,18;UBERON:0004139,4.49e-07,18;UBERON:0004291,4.49e-07,18 | |||
|phase1_expression=1.44133962394315,45.7157784007563,52.3249125297966,32.6661348211376,33.0591181764589,7.05092942029937,5.60670337429262,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0.274228867211478,1.27316895539409,7.56885282344521,0,0,11.5194544411253,10.5528269290898,48.8097169497767,19.8150518233174,22.4090081993325,17.6721780094428,9.07308467135751,18.4036323843903,0.635030673459631,0,0,0.577703239502549,0.332469290716985,0.816677425049476,0,0,0,0,0,0,0.377690453926732,0.101376931219515,0,0,0,0,0.194429899074283,1.53985063787899,1.43752564364972,0.167782606057736,0.725362142011344,0,0.257259436035947,0.286533439938757,2.06268836910977,0,0,0.633831403506179,0,1.77858959222228,0,0,0,0,0,0,0.135005938331691,0,0.285650984403804,0,0,0,0,0,0,0,0.131886287730194,0.0914876436024097,1.04182674111352,0,0.56276261003168,0,0.294628585473668,0,0,0.075726193333184,0.0755715601067855,2.6087803983151,4.30211938490693,0,0,0,0.896053774194671,3.5111105032938,0.170430322578058,0.259786004602869,0,0.563373679106722,0,0,0,1.08245520505607,0.760079596425296,1.51657333504435,4.33898742932428,3.6251303710604,0.593768556259299,0.346970653532272,0,0.230615497256059,0.150722640552623,1.29347577849275,0.125666591329675,2.47194967734374,3.03658649531814,0,1.13236794963186,1.10420759230197,1.45462575940567,11.1835056730873,0.292780797011547,0.83778682725382,32.1875889562825,0,0,0,0.299581278809645,0,0.125654352112864,0.347648640384553,0,0,0.162241263067758,0.407357455401265,2.23932547098167,8.33985102831127,2.10441855886474,0,0.229902104433473,0.540186389416048,1.35634336052144,1.2246569847239,0.384341160854549,0.468508622798644,1.55222022443409,0.215567992932842,0.189106080167819,0.703804496655795,1.53437012699302,1.94633074457919,18.4573648256748,15.2278780941878,0.995171334092466,0,0,0,1.86413195281952,3.28336483973535,4.32148947506436,4.97163944728941,5.70616272067471,9.71882811190483,16.509910077279,16.3646774853768,28.257212852855,18.1015834904828,37.5943492741128,54.4782400148151,80.2637930965074,58.4003306674195,73.6793238994441,0.210289948564127,0.308713837137853,73.683388605387,11.9002754998595,0.639864751605702,0.464473343720877,0.77320476793256,1.00841762311671,0.22237804384487,0.570676878337677,18.0321043386914,1.97638745668813,3.2673577144035,1.59165177632921,0.974820435595601,17.0775687644302,21.3976669375947,20.9098336917086,0.948339504765408,0.685491075658373,2.25415471346161,0.610953983535943,1.93952487167626,1.26244475802573,0.822074982615345,1.18088118383682,1.09899109488962,1.23397163921801,0.889357881261447,0.166845105716094,0.393117990226406,0.224862112384854,0.202860121388503,0.241177159752417,0.25462585178142,0.287696137450811,0.324270453550071,0,1.43768206527355,1.48856379067401,0,0.252578877947112,0.179397413521912,0,45.2645315908181,1.32643988239339,2.28150967018836,2.03694102930226,4.45911471748154,4.18765643604539,10.4739201989846,21.6598349122157,20.3349335896986,21.9250042752287,16.4238411717212,53.4194405973306,24.866637388689,38.9105967584266,0,0,0,1.93155722413313,0.160550589987792,0.234423373184406,0,1.00988370881749,0,0,0,0,0,0,0,0,0,0,2.12910127812403,0.890328018336276,0.651547837414304,1.15479086080775,1.32745138339963,0.971122544619926,0.302323556964751,0.377210159511796,1.47650946440386,0,2.32585463851399,2.18120237686503,1.06949213515416,0.632073515871632,1.05418608574999,0,0,0,0.258717367565509,0,1.41872186913819,0.713475270408282,0.329098041204242,0.913394847343798,16.6616912725234,2.33015277950202,3.52845436887939,31.3283880588812,43.2724663545027,17.8526257787341,21.4870219205646,35.1261525454431,12.5336759750836,0,0.170870880797853,0.619160603889667,0.185194527369712,0.376736914009382,0,0.457556346413045,0.169978429993855,0,0,24.821436068393,0.474503990371703,0.406638934253697,3.02414954301044,24.4633306336928,24.0198820120795,30.074749243815,18.2664137152992,33.2430046319718,5.83267379813068,3.10669656543463,1.12738587736838,3.43888055901151,3.80554528051325,4.4723773319131,2.97067593998782,5.06868376472335,3.0512882047896,3.77592716047455,11.953965264531,8.93861247056222,4.03242008761012,1.26404448251271,0.202725215290164,1.43795340030758,1.16928740680016,0.716106782669926,0.79472541912506,0.240390899039938,0.738447635872886,0.605798699688886,0.990688486514998,1.00826185136841,0.682205165178267,1.15454209968395,0.818138315270983,36.7303221456642,0.665957860122194,0,0,5.9888774149979,18.580565069667,1.09890974560359,72.0277753705661,4.51414893631827,0,0.460325236507177,0,0,0,0,0.675022500231806,0.900642406448441,0.453142408984205,0,0.207574695168353,0.798049746802062,0.853668028770671,3.40349403895612,0.628839487883947,0.735374033800057,2.22246727801615,3.29656091582231,3.85103051510178,2.52697211763797,2.78827229879264,2.64076877940507,2.24739617927718,2.24088033417042,1.60819313075717,1.42888107384922,1.85414921511769,2.50781986602817,4.94503080963968,2.06078488188156,3.42869252385415,3.01708870470874,4.5302876089991,2.90692833264657,2.82328141245992,2.79228206042532,2.74391959309159,2.8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| |phase1_expression=1.44133962394315,45.7157784007563,52.3249125297966,32.6661348211376,33.0591181764589,7.05092942029937,5.60670337429262,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0.274228867211478,1.27316895539409,7.56885282344521,0,0,11.5194544411253,10.5528269290898,48.8097169497767,19.8150518233174,22.4090081993325,17.6721780094428,9.07308467135751,18.4036323843903,0.635030673459631,0,0,0.577703239502549,0.332469290716985,0.816677425049476,0,0,0,0,0,0,0.377690453926732,0.101376931219515,0,0,0,0,0.194429899074283,1.53985063787899,1.43752564364972,0.167782606057736,0.725362142011344,0,0.257259436035947,0.286533439938757,2.06268836910977,0,0,0.633831403506179,0,1.77858959222228,0,0,0,0,0,0,0.135005938331691,0,0.285650984403804,0,0,0,0,0,0,0,0.131886287730194,0.0914876436024097,1.04182674111352,0,0.56276261003168,0,0.294628585473668,0,0,0.075726193333184,0.0755715601067855,2.6087803983151,4.30211938490693,0,0,0,0.896053774194671,3.5111105032938,0.170430322578058,0.259786004602869,0,0.563373679106722,0,0,0,1.08245520505607,0.760079596425296,1.51657333504435,4.33898742932428,3.6251303710604,0.593768556259299,0.346970653532272,0,0.230615497256059,0.150722640552623,1.29347577849275,0.125666591329675,2.47194967734374,3.03658649531814,0,1.13236794963186,1.10420759230197,1.45462575940567,11.1835056730873,0.292780797011547,0.83778682725382,32.1875889562825,0,0,0,0.299581278809645,0,0.125654352112864,0.347648640384553,0,0,0.162241263067758,0.407357455401265,2.23932547098167,8.33985102831127,2.10441855886474,0,0.229902104433473,0.540186389416048,1.35634336052144,1.2246569847239,0.384341160854549,0.468508622798644,1.55222022443409,0.215567992932842,0.189106080167819,0.703804496655795,1.53437012699302,1.94633074457919,18.4573648256748,15.2278780941878,0.995171334092466,0,0,0,1.86413195281952,3.28336483973535,4.32148947506436,4.97163944728941,5.70616272067471,9.71882811190483,16.509910077279,16.3646774853768,28.257212852855,18.1015834904828,37.5943492741128,54.4782400148151,80.2637930965074,58.4003306674195,73.6793238994441,0.210289948564127,0.308713837137853,73.683388605387,11.9002754998595,0.639864751605702,0.464473343720877,0.77320476793256,1.00841762311671,0.22237804384487,0.570676878337677,18.0321043386914,1.97638745668813,3.2673577144035,1.59165177632921,0.974820435595601,17.0775687644302,21.3976669375947,20.9098336917086,0.948339504765408,0.685491075658373,2.25415471346161,0.610953983535943,1.93952487167626,1.26244475802573,0.822074982615345,1.18088118383682,1.09899109488962,1.23397163921801,0.889357881261447,0.166845105716094,0.393117990226406,0.224862112384854,0.202860121388503,0.241177159752417,0.25462585178142,0.287696137450811,0.324270453550071,0,1.43768206527355,1.48856379067401,0,0.252578877947112,0.179397413521912,0,45.2645315908181,1.32643988239339,2.28150967018836,2.03694102930226,4.45911471748154,4.18765643604539,10.4739201989846,21.6598349122157,20.3349335896986,21.9250042752287,16.4238411717212,53.4194405973306,24.866637388689,38.9105967584266,0,0,0,1.93155722413313,0.160550589987792,0.234423373184406,0,1.00988370881749,0,0,0,0,0,0,0,0,0,0,2.12910127812403,0.890328018336276,0.651547837414304,1.15479086080775,1.32745138339963,0.971122544619926,0.302323556964751,0.377210159511796,1.47650946440386,0,2.32585463851399,2.18120237686503,1.06949213515416,0.632073515871632,1.05418608574999,0,0,0,0.258717367565509,0,1.41872186913819,0.713475270408282,0.329098041204242,0.913394847343798,16.6616912725234,2.33015277950202,3.52845436887939,31.3283880588812,43.2724663545027,17.8526257787341,21.4870219205646,35.1261525454431,12.5336759750836,0,0.170870880797853,0.619160603889667,0.185194527369712,0.376736914009382,0,0.457556346413045,0.169978429993855,0,0,24.821436068393,0.474503990371703,0.406638934253697,3.02414954301044,24.4633306336928,24.0198820120795,30.074749243815,18.2664137152992,33.2430046319718,5.83267379813068,3.10669656543463,1.12738587736838,3.43888055901151,3.80554528051325,4.4723773319131,2.97067593998782,5.06868376472335,3.0512882047896,3.77592716047455,11.953965264531,8.93861247056222,4.03242008761012,1.26404448251271,0.202725215290164,1.43795340030758,1.16928740680016,0.716106782669926,0.79472541912506,0.240390899039938,0.738447635872886,0.605798699688886,0.990688486514998,1.00826185136841,0.682205165178267,1.15454209968395,0.818138315270983,36.7303221456642,0.665957860122194,0,0,5.9888774149979,18.580565069667,1.09890974560359,72.0277753705661,4.51414893631827,0,0.460325236507177,0,0,0,0,0.675022500231806,0.900642406448441,0.453142408984205,0,0.207574695168353,0.798049746802062,0.853668028770671,3.40349403895612,0.628839487883947,0.735374033800057,2.22246727801615,3.29656091582231,3.85103051510178,2.52697211763797,2.78827229879264,2.64076877940507,2.24739617927718,2.24088033417042,1.60819313075717,1.42888107384922,1.85414921511769,2.50781986602817,4.94503080963968,2.06078488188156,3.42869252385415,3.01708870470874,4.5302876089991,2.90692833264657,2.82328141245992,2.79228206042532,2.74391959309159,2.8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| ||
|short_description=p3@Gcom1 | |||
}} | }} |
Latest revision as of 02:09, 27 September 2015
Short description: | p3@Gcom1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Gcom1_5end |
Coexpression cluster: | MCL_coexpression_mm9:1351 |
Association with transcript: | -18bp_to_ENSMUST00000163998, ENSMUST00000164962, ENSMUST00000165936, ENSMUST00000166843, ENSMUST00000169573_5end |
EntrezGene: | Gcom1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lung | 2.69e-07 | 14 |
respiratory tube | 2.69e-07 | 14 |
respiration organ | 2.69e-07 | 14 |
pair of lungs | 2.69e-07 | 14 |
lung primordium | 2.69e-07 | 14 |
lung bud | 2.69e-07 | 14 |
primary circulatory organ | 4.49e-07 | 18 |
heart | 4.49e-07 | 18 |
primitive heart tube | 4.49e-07 | 18 |
primary heart field | 4.49e-07 | 18 |
anterior lateral plate mesoderm | 4.49e-07 | 18 |
heart tube | 4.49e-07 | 18 |
heart primordium | 4.49e-07 | 18 |
cardiac mesoderm | 4.49e-07 | 18 |
cardiogenic plate | 4.49e-07 | 18 |
heart rudiment | 4.49e-07 | 18 |