FFCP PHASE1:Mm9::chr6:40578569..40578578,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(3 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=232714 | |EntrezGene=232714 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=126 | |MCL_coexpression_id=126 | ||
|TSSclassifier=NA | |||
|UniProt=B5THE2,Q6XK24 | |UniProt=B5THE2,Q6XK24 | ||
|association_with_transcript=-251bp_to_ENSMUST00000071535,NM_001171003,uc009bnf.2,uc012ekg.1_5end | |association_with_transcript=-251bp_to_ENSMUST00000071535,NM_001171003,uc009bnf.2,uc012ekg.1_5end | ||
|cluster_id=chr6:40578569..40578578,+ | |||
|description=CAGE_peak_3_at_Mgam_5end | |description=CAGE_peak_3_at_Mgam_5end | ||
|id=chr6:40578569..40578578,+ | |id=chr6:40578569..40578578,+ | ||
|ontology_enrichment_celltype=CL:0002563!3.42e-15!9;CL:0002251!3.42e-15!9;CL:0000239!2.70e-09!6;CL:0000677!2.70e-09!6;CL:0000212!2.70e-09!6;CL:0000584!2.70e-09!6;CL:0002076!1.45e-08!15;CL:0000075!6.45e-08!7;CL:0002250!1.24e-07!3;CL:0000066!1.88e-07!25 | |ontology_enrichment_celltype=CL:0002563!3.42e-15!9;CL:0002251!3.42e-15!9;CL:0000239!2.70e-09!6;CL:0000677!2.70e-09!6;CL:0000212!2.70e-09!6;CL:0000584!2.70e-09!6;CL:0002076!1.45e-08!15;CL:0000075!6.45e-08!7;CL:0002250!1.24e-07!3;CL:0000066!1.88e-07!25 | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!4.33e-32!43;UBERON:0000344!4.39e-29!15;UBERON:0001242!1.91e-24!13;UBERON:0000060!1.91e-24!13;UBERON:0001262!1.91e-24!13;UBERON:0004786!1.91e-24!13;UBERON:0005409!1.12e-21!59;UBERON:0004923!6.79e-17!24;UBERON:0003350!3.42e-15!9;UBERON:0004808!3.42e-15!9;UBERON:0001277!3.42e-15!9;UBERON:0000485!3.54e-12!11;UBERON:0000331!1.35e-08!3;UBERON:0002116!1.35e-08!3;UBERON:0001204!1.35e-08!3;UBERON:0001168!1.35e-08!3;UBERON:0001007!1.99e-08!128;UBERON:0001555!1.99e-08!128;UBERON:0007026!1.99e-08!128;UBERON:0004119!3.37e-08!130;UBERON:0000925!3.37e-08!130;UBERON:0006595!3.37e-08!130;UBERON:0004921!6.93e-07!126;UBERON:0004185!6.93e-07!126 | |ontology_enrichment_uberon=UBERON:0000160!4.33e-32!43;UBERON:0000344!4.39e-29!15;UBERON:0001242!1.91e-24!13;UBERON:0000060!1.91e-24!13;UBERON:0001262!1.91e-24!13;UBERON:0004786!1.91e-24!13;UBERON:0005409!1.12e-21!59;UBERON:0004923!6.79e-17!24;UBERON:0003350!3.42e-15!9;UBERON:0004808!3.42e-15!9;UBERON:0001277!3.42e-15!9;UBERON:0000485!3.54e-12!11;UBERON:0000331!1.35e-08!3;UBERON:0002116!1.35e-08!3;UBERON:0001204!1.35e-08!3;UBERON:0001168!1.35e-08!3;UBERON:0001007!1.99e-08!128;UBERON:0001555!1.99e-08!128;UBERON:0007026!1.99e-08!128;UBERON:0004119!3.37e-08!130;UBERON:0000925!3.37e-08!130;UBERON:0006595!3.37e-08!130;UBERON:0004921!6.93e-07!126;UBERON:0004185!6.93e-07!126 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002108,1.04e-27,4;UBERON:0000344,6.10e-22,15;UBERON:0000331,2.44e-21,3;UBERON:0002116,2.44e-21,3;UBERON:0001204,2.44e-21,3;UBERON:0001168,2.44e-21,3;UBERON:0000160,6.05e-21,31;UBERON:0001962,1.44e-14,2;UBERON:0001961,1.44e-14,2;UBERON:0001744,1.44e-14,2;UBERON:0004923,1.49e-13,24;UBERON:0005409,1.69e-13,47;UBERON:0001242,2.84e-13,13;UBERON:0001262,2.84e-13,13;UBERON:0004786,2.84e-13,13;UBERON:0002465,5.01e-10,3;UBERON:0003199,6.57e-08,1;UBERON:0007023,6.85e-08,51;UBERON:0001007,2.91e-07,116;UBERON:0001555,2.91e-07,116;UBERON:0007026,2.91e-07,116;UBERON:0004119,4.07e-07,118;UBERON:0000925,4.07e-07,118;UBERON:0006595,4.07e-07,118 | |||
|phase1_expression=0,0.348975407639361,0.454999239389536,0.60492842261366,0,0.33575854382378,0.934450562382103,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.59992422793407,1.14704640533585,0,0.86152399231815,1.29282739611533,5.32065574477847,1.00812051903972,1.99557459589774,0,0,0,1.1554064790051,0.332469290716985,0.612508068787107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27728527604296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150704817835715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.65209391491899,1.05780226665418,0,0,0.257734922644187,0.605050573870028,1.11189021922435,0.570676878337677,0.949058123089023,0.658795818896044,0.754005626400808,0.397912944082302,0.19496408711912,0,0.648414149624083,1.59313018603494,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1659233465194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0.0640251524048693,0,0,0.115884325944855,0.192909220463705,0,0,0,0.177475806159338,0,0,0.0941093804153306,0,0,0,0,0,0,0.0985044823755635,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0.348975407639361,0.454999239389536,0.60492842261366,0,0.33575854382378,0.934450562382103,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.59992422793407,1.14704640533585,0,0.86152399231815,1.29282739611533,5.32065574477847,1.00812051903972,1.99557459589774,0,0,0,1.1554064790051,0.332469290716985,0.612508068787107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27728527604296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150704817835715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.65209391491899,1.05780226665418,0,0,0.257734922644187,0.605050573870028,1.11189021922435,0.570676878337677,0.949058123089023,0.658795818896044,0.754005626400808,0.397912944082302,0.19496408711912,0,0.648414149624083,1.59313018603494,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1659233465194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0.0640251524048693,0,0,0.115884325944855,0.192909220463705,0,0,0,0.177475806159338,0,0,0.0941093804153306,0,0,0,0,0,0,0.0985044823755635,0,0,0,0,0,0,0,0,0 | ||
|short_description=p3@Mgam | |short_description=p3@Mgam | ||
}} | }} |
Latest revision as of 04:16, 27 September 2015
Short description: | p3@Mgam |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Mgam_5end |
Coexpression cluster: | MCL_coexpression_mm9:126 |
Association with transcript: | -251bp_to_ENSMUST00000071535, NM_001171003, uc009bnf.2, uc012ekg.1_5end |
EntrezGene: | Mgam |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
small intestine | 1.04e-27 | 4 |
mucosa | 6.10e-22 | 15 |
ileal mucosa | 2.44e-21 | 3 |
ileum | 2.44e-21 | 3 |
mucosa of small intestine | 2.44e-21 | 3 |
wall of small intestine | 2.44e-21 | 3 |
intestine | 6.05e-21 | 31 |
gut-associated lymphoid tissue | 1.44e-14 | 2 |
mucosa-associated lymphoid tissue | 1.44e-14 | 2 |
lymphoid tissue | 1.44e-14 | 2 |
organ component layer | 1.49e-13 | 24 |
gastrointestinal system | 1.69e-13 | 47 |
intestinal mucosa | 2.84e-13 | 13 |
wall of intestine | 2.84e-13 | 13 |
gastrointestinal system mucosa | 2.84e-13 | 13 |
lymphoid system | 5.01e-10 | 3 |
egg chamber | 6.57e-08 | 1 |
adult organism | 6.85e-08 | 51 |
digestive system | 2.91e-07 | 116 |
digestive tract | 2.91e-07 | 116 |
primitive gut | 2.91e-07 | 116 |
endoderm-derived structure | 4.07e-07 | 118 |
endoderm | 4.07e-07 | 118 |
presumptive endoderm | 4.07e-07 | 118 |