FFCP PHASE1:Mm9::chr18:35886673..35886693,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=73449 | |EntrezGene=73449 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=219 | |||
|TSSclassifier=NA | |||
|UniProt=Q3TS39 | |UniProt=Q3TS39 | ||
|association_with_transcript=30bp_to_ENSMUST00000097617,NM_001033168,uc008ems.1_5end | |||
|cluster_id=chr18:35886673..35886693,+ | |||
|description=CAGE_peak_3_at_1700066B19Rik_5end | |||
|id=chr18:35886673..35886693,+ | |||
|ontology_enrichment_celltype=CL:0000066!1.07e-08!25;CL:0002563!1.17e-08!9;CL:0002251!1.17e-08!9;CL:0000473!6.93e-08!3;CL:0000627!6.93e-08!3;CL:0000682!6.93e-08!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000682,2.39e-15,3;CL:0000239,3.84e-13,6;CL:0000677,3.84e-13,6;CL:0000584,3.84e-13,6;CL:0002563,4.29e-13,9;CL:0002251,4.29e-13,9;CL:0000066,2.47e-11,25;CL:0000075,2.73e-11,7;CL:0002076,8.64e-08,15;CL:0000473,7.58e-07,7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!7.40e-20!59;UBERON:0000160!6.05e-17!43;UBERON:0000344!9.10e-17!15;UBERON:0001007!2.94e-13!128;UBERON:0001555!2.94e-13!128;UBERON:0007026!2.94e-13!128;UBERON:0001242!6.27e-13!13;UBERON:0000060!6.27e-13!13;UBERON:0001262!6.27e-13!13;UBERON:0004786!6.27e-13!13;UBERON:0004119!6.35e-13!130;UBERON:0000925!6.35e-13!130;UBERON:0006595!6.35e-13!130;UBERON:0004921!2.49e-11!126;UBERON:0004185!2.49e-11!126;UBERON:0004923!1.76e-09!24;UBERON:0003350!1.17e-08!9;UBERON:0004808!1.17e-08!9;UBERON:0001277!1.17e-08!9;UBERON:0000331!1.03e-07!3;UBERON:0002116!1.03e-07!3;UBERON:0001204!1.03e-07!3;UBERON:0001168!1.03e-07!3;UBERON:0000485!6.36e-07!11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,1.57e-30,15;UBERON:0001242,1.83e-22,13;UBERON:0001262,1.83e-22,13;UBERON:0004786,1.83e-22,13;UBERON:0004923,1.47e-18,24;UBERON:0005409,3.64e-17,47;UBERON:0000160,1.28e-16,31;UBERON:0000331,5.72e-15,3;UBERON:0002116,5.72e-15,3;UBERON:0001204,5.72e-15,3;UBERON:0001168,5.72e-15,3;UBERON:0003350,4.29e-13,9;UBERON:0004808,4.29e-13,9;UBERON:0001277,4.29e-13,9;UBERON:0002108,2.31e-11,4;UBERON:0001962,6.66e-11,2;UBERON:0001961,6.66e-11,2;UBERON:0001744,6.66e-11,2;UBERON:0000485,1.09e-10,11;UBERON:0001155,7.15e-10,2;UBERON:0000059,7.15e-10,2;UBERON:0001007,6.85e-08,116;UBERON:0001555,6.85e-08,116;UBERON:0007026,6.85e-08,116;UBERON:0004119,1.03e-07,118;UBERON:0000925,1.03e-07,118;UBERON:0006595,1.03e-07,118;UBERON:0002465,1.52e-07,3 | |||
|phase1_expression=0,7.67745896806594,7.73498706962211,0,0,3.3575854382378,6.07392865548367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.03966660290989,8.02932483735095,6.31655160526522,6.8921919385452,10.1271479362368,4.56056206695297,1.51218077855958,19.2905544270115,0,0,0,1.1554064790051,0.664938581433969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.869593466105033,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216491041011214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.86391761218122,0,0,1.02182822083437,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128867461322093,0.201683524623343,0,0.570676878337677,0,0.329397909448022,0.502670417600539,0.198956472041151,0.19496408711912,0.898819408654221,0.648414149624083,1.1948476395262,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0.157635144106191,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18805874903981,1.04544148007234,0.218362563746178,0.134864346384821,0.247960367176008,0,1.55537967950151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0762068066549998,0,0,0,0,0.453460767230423,0,0,0,0,0,0.183151624267265,0.428736758158132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0.0640251524048693,0,0,0,0,0,0,0,0,0,0,0.0941093804153306,0.0846146078916765,0,0,0,0,0,0,0,0,0,0.249810577937946,0,0,0,0,0 | |phase1_expression=0,7.67745896806594,7.73498706962211,0,0,3.3575854382378,6.07392865548367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.03966660290989,8.02932483735095,6.31655160526522,6.8921919385452,10.1271479362368,4.56056206695297,1.51218077855958,19.2905544270115,0,0,0,1.1554064790051,0.664938581433969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.869593466105033,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216491041011214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.86391761218122,0,0,1.02182822083437,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128867461322093,0.201683524623343,0,0.570676878337677,0,0.329397909448022,0.502670417600539,0.198956472041151,0.19496408711912,0.898819408654221,0.648414149624083,1.1948476395262,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0.157635144106191,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18805874903981,1.04544148007234,0.218362563746178,0.134864346384821,0.247960367176008,0,1.55537967950151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0762068066549998,0,0,0,0,0.453460767230423,0,0,0,0,0,0.183151624267265,0.428736758158132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0.0640251524048693,0,0,0,0,0,0,0,0,0,0,0.0941093804153306,0.0846146078916765,0,0,0,0,0,0,0,0,0,0.249810577937946,0,0,0,0,0 | ||
|short_description=p3@1700066B19Rik | |||
}} | }} |
Latest revision as of 04:58, 27 September 2015
Short description: | p3@1700066B19Rik |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_1700066B19Rik_5end |
Coexpression cluster: | MCL_coexpression_mm9:219 |
Association with transcript: | 30bp_to_ENSMUST00000097617, NM_001033168, uc008ems.1_5end |
EntrezGene: | 1700066B19Rik |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
M cell of gut | 2.39e-15 | 3 |
brush border epithelial cell | 3.84e-13 | 6 |
gut absorptive cell | 3.84e-13 | 6 |
enterocyte | 3.84e-13 | 6 |
intestinal epithelial cell | 4.29e-13 | 9 |
epithelial cell of alimentary canal | 4.29e-13 | 9 |
epithelial cell | 2.47e-11 | 25 |
columnar/cuboidal epithelial cell | 2.73e-11 | 7 |
endo-epithelial cell | 8.64e-08 | 15 |
defensive cell | 7.58e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
mucosa | 1.57e-30 | 15 |
intestinal mucosa | 1.83e-22 | 13 |
wall of intestine | 1.83e-22 | 13 |
gastrointestinal system mucosa | 1.83e-22 | 13 |
organ component layer | 1.47e-18 | 24 |
gastrointestinal system | 3.64e-17 | 47 |
intestine | 1.28e-16 | 31 |
ileal mucosa | 5.72e-15 | 3 |
ileum | 5.72e-15 | 3 |
mucosa of small intestine | 5.72e-15 | 3 |
wall of small intestine | 5.72e-15 | 3 |
epithelium of mucosa | 4.29e-13 | 9 |
gastrointestinal system epithelium | 4.29e-13 | 9 |
intestinal epithelium | 4.29e-13 | 9 |
small intestine | 2.31e-11 | 4 |
gut-associated lymphoid tissue | 6.66e-11 | 2 |
mucosa-associated lymphoid tissue | 6.66e-11 | 2 |
lymphoid tissue | 6.66e-11 | 2 |
simple columnar epithelium | 1.09e-10 | 11 |
colon | 7.15e-10 | 2 |
large intestine | 7.15e-10 | 2 |
digestive system | 6.85e-08 | 116 |
digestive tract | 6.85e-08 | 116 |
primitive gut | 6.85e-08 | 116 |
endoderm-derived structure | 1.03e-07 | 118 |
endoderm | 1.03e-07 | 118 |
presumptive endoderm | 1.03e-07 | 118 |
lymphoid system | 1.52e-07 | 3 |