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FFCP PHASE1:Mm9::chr6:42323253..42323273,-: Difference between revisions

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{{FFCP
{{FFCP
|id=chr6:42323253..42323273,-
|DHSsupport=NA
|short_description=p1@Epha1
|DPIdataset=NA
|description=CAGE_peak_1_at_Epha1_5end
|association_with_transcript=0bp_to_ENSMUST00000073387,NM_023580,uc009brc.1,uc009brd.1_5end
|EntrezGene=13835
|EntrezGene=13835
|HGNC=
|HGNC=
|MCL_coexpression_id=24
|TSSclassifier=NA
|UniProt=Q60750,Q9CYI2
|UniProt=Q60750,Q9CYI2
|association_with_transcript=0bp_to_ENSMUST00000073387,NM_023580,uc009brc.1,uc009brd.1_5end
|cluster_id=chr6:42323253..42323273,-
|description=CAGE_peak_1_at_Epha1_5end
|id=chr6:42323253..42323273,-
|ontology_enrichment_celltype=CL:0000066!1.19e-07!25
|ontology_enrichment_celltype_v019_2=CL:0000066,1.73e-08,25
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004119!5.78e-21!130;UBERON:0000925!5.78e-21!130;UBERON:0006595!5.78e-21!130;UBERON:0001007!1.37e-20!128;UBERON:0001555!1.37e-20!128;UBERON:0007026!1.37e-20!128;UBERON:0004921!1.98e-19!126;UBERON:0004185!1.98e-19!126;UBERON:0000160!2.75e-14!43;UBERON:0005409!1.28e-13!59;UBERON:0000466!2.92e-09!79;UBERON:0000344!2.93e-09!15;UBERON:0001242!3.71e-08!13;UBERON:0000060!3.71e-08!13;UBERON:0001262!3.71e-08!13;UBERON:0004786!3.71e-08!13;UBERON:0000077!6.80e-08!97;UBERON:0009854!1.43e-07!23;UBERON:0009856!1.43e-07!23;UBERON:0002365!1.50e-07!25;UBERON:0002330!1.50e-07!25;UBERON:0005177!2.41e-07!85;UBERON:0009569!2.48e-07!66;UBERON:0002107!4.27e-07!22;UBERON:0007499!4.27e-07!22;UBERON:0006925!4.27e-07!22;UBERON:0009497!4.27e-07!22;UBERON:0000015!4.27e-07!22;UBERON:0002423!4.27e-07!22;UBERON:0006235!4.27e-07!22;UBERON:0008835!4.27e-07!22;UBERON:0003894!4.27e-07!22;UBERON:0004161!4.27e-07!22;UBERON:0008836!4.27e-07!22;UBERON:0001041!9.42e-07!92
|ontology_enrichment_uberon_v019_2=UBERON:0004119,4.45e-20,118;UBERON:0000925,4.45e-20,118;UBERON:0006595,4.45e-20,118;UBERON:0001007,1.03e-19,116;UBERON:0001555,1.03e-19,116;UBERON:0007026,1.03e-19,116;UBERON:0004921,1.54e-18,114;UBERON:0000160,4.50e-14,31;UBERON:0005409,4.84e-13,47;UBERON:0000344,1.06e-09,15;UBERON:0005177,2.04e-09,79;UBERON:0001242,1.55e-08,13;UBERON:0001262,1.55e-08,13;UBERON:0004786,1.55e-08,13;UBERON:0009854,1.10e-07,23;UBERON:0009856,1.10e-07,23;UBERON:0002365,1.14e-07,25;UBERON:0002330,1.14e-07,25;UBERON:0009569,2.46e-07,66;UBERON:0002107,3.46e-07,22;UBERON:0007499,3.46e-07,22;UBERON:0006925,3.46e-07,22;UBERON:0009497,3.46e-07,22;UBERON:0000015,3.46e-07,22;UBERON:0002423,3.46e-07,22;UBERON:0006235,3.46e-07,22;UBERON:0008835,3.46e-07,22;UBERON:0003894,3.46e-07,22;UBERON:0004161,3.46e-07,22;UBERON:0008836,3.46e-07,22;UBERON:0002100,5.51e-07,90;UBERON:0005911,7.97e-07,69
|phase1_expression=5.12476310735341,62.4665979674456,68.2498859084304,131.571931918471,171.807235371597,29.5467518564926,20.3242997318107,0,0,0,0,0,0,0,0,0,0,0.157731082679119,0,0,3.06155844543851,0,0,25.2788028013583,29.3643879765978,51.6808767703518,40.060865642794,30.8123862740821,34.58426234106,43.3491823187081,19.9557459589774,0,0,0,7.22129049378186,8.47796691328311,5.9209113316087,0,0,0,0,0,0.485510353031154,0.377690453926732,0.506884656097573,1.83546752161682,0,0,0,0.194429899074283,0.699932108126813,1.43752564364972,0.167782606057736,0,0.336093799142464,0,0,0,0,0,0,2.37191172448392,0,0,0,0,3.89480143673926,1.15265491596466,0,0.135005938331691,0.210324961351382,0.285650984403804,0.441737081903227,0,0,0,0,1.53224805702225,0.153606533256243,0,0.274462930807229,0,0,0.56276261003168,0.30559649555362,0,0,0.372798891650601,0,0.0755715601067855,6.08715426273523,12.0459342777394,16.9992833426938,15.6513925574967,24.0417274455638,23.7454250161588,10.5333315098814,0.170430322578058,0,0.35333957451034,9.85903938436764,0,0,0,9.95858788651585,8.36087556067825,7.58286667522175,15.0722721229159,0,0.148442139064825,1.21439728736295,1.21786191324856,1.84492397804847,0.150722640552623,0.705532242814229,0.376999773989026,6.92145909656247,1.59059292611903,0,0.485300549842228,0,0,20.5030937339934,1.46390398505774,0.628340120440365,31.1657607354481,0,0,0.127070227073065,0,0,0,0,0.511430914660661,0.41557608911912,0.162241263067758,5.6011650117674,2.61254638281195,12.6361379216837,5.26104639716185,2.73252930221678,1.60931473103431,2.16074555766419,2.41127708537144,2.10913147369116,1.15302348256365,0.843315521037559,3.10444044886819,5.6047678162539,3.78212160335639,3.87092473160687,4.82230611340665,9.45360647367033,14.626590993931,17.0799173218593,2.7864797354589,0,0,0,2.48550927042602,2.57978665979206,0.900310307305074,0.710234206755631,0.787056926989615,0.462801338662135,0.697601834251224,0,0.700592054203017,0.329119699826961,0.492502392237286,0.56748166682099,0.438599962275997,0.439100230582101,0.134206418760372,0,0,53.8582616263591,39.9320355661952,1.2797295032114,1.62565670302307,2.83508414908605,6.05050573870028,6.44896327150124,7.60902504450237,29.4208018157597,20.4226703857773,10.8074139784116,9.15199771389294,14.2323783596958,35.9527763461689,19.2362864388478,21.1089749649629,1.89667900953082,2.39921876480431,3.38123207019241,3.25842124552503,1.93952487167626,4.34842083319975,5.24863258131335,6.05201606716369,5.80895293013087,8.02081565491703,19.862326014839,0.500535317148282,1.96558995113203,1.57403478669398,3.65148218499305,3.85883455603867,6.62027214631691,10.0693648107784,7.62035565842666,15.6500005517206,28.7536413054709,24.9334434937897,35.5722947350599,32.3300963772303,19.9131129009323,17.8504102904446,6.83586803616437,3.03186258832776,4.4000543639347,5.60158783058121,7.97946844180907,11.3904255060435,12.1402256851867,17.9522956029175,9.45810864637146,9.52298165489732,11.0023790373666,12.4536119183961,9.32498902075836,7.95569822198314,0,0,4.91764273019036,3.86311444826625,0.160550589987792,0.586058432961016,0.655739781506702,0.252470927204373,0.315508219416257,0.780877488593277,0.646270193198397,0.238968797952552,0,0,0,0,0,0.321321316421807,1.41940085208269,7.30068975035746,4.23506094319298,2.8044920905331,2.65490276679926,4.37005145078967,5.74414758233027,5.84675747243284,5.90603785761546,5.84126781093462,9.56184684722418,6.18007340111759,5.34746067577082,3.47640433729398,4.21674434299995,4.12542172992747,3.40439605753788,3.6012218806262,5.04498866752743,5.5727629108214,3.01478397191865,2.85390108163313,2.46823530903181,3.34911444026059,3.98941903708308,5.50763384245932,5.95426674748397,36.6047481530086,26.4801659781285,28.5280134910177,39.6316182090413,35.4544343449332,29.7310453362448,0.556275906031529,0,2.27025554759545,0.740778109478847,0,0,0,0.509935289981566,0.839708713941948,0.138199973804424,8.59203556213602,3.16335993581135,7.31950081656655,11.6645768087545,13.7998275369549,12.4466661335321,13.2167059457124,16.2000773221658,13.3495530411855,15.2945668484316,13.6694648879124,0,1.94371509857172,0.827292452285488,2.13896307178452,1.93739735216597,1.35164900392623,1.17357238645754,3.3853140059427,2.51662426621706,0.241584120826006,0.288030006257865,1.58005560314089,3.04087822935246,4.41657115808757,1.94881234466693,1.9692936523423,1.78813219303138,1.44234539423963,1.18151621739662,0.504832249740738,1.37172251979,0.201652370273681,0.38983152295901,0.865906574762965,1.63627663054197,26.3007244993645,5.54964883435162,2.9605572681127,3.52557694364565,17.5802530569293,3.94133198447482,7.8755198434924,36.6569928225203,9.5298699766719,0.564751842617067,0.460325236507177,0,0,0,0,0,0,0,0,0.518936737920883,3.59122386060928,2.39027048055788,5.83456120963906,0.628839487883947,1.83843508450014,4.4449345560323,3.29656091582231,4.49286893428541,3.53776096469316,3.8021894983536,3.9611531691076,3.55837728385553,3.84150914429216,2.87177344778066,3.33405583898152,4.75125736373908,2.70072908649187,5.76920261124629,3.67997300335993,3.77156177623957,4.43689515398344,3.57654284920981,2.90692833264657,3.3879376949519,3.46919892355874,4.39027134894654,3.41990624869196,3.12349461845482,4.48913817326191,5.10130577933949,3.34915240076916,5.72923460437565,4.49316839439301,7.33045121728337,6.99469618226249,8.18760629558929,8.80971321598023,3.06061331310149,5.95596831622692,0.927471342481686
|phase1_expression=5.12476310735341,62.4665979674456,68.2498859084304,131.571931918471,171.807235371597,29.5467518564926,20.3242997318107,0,0,0,0,0,0,0,0,0,0,0.157731082679119,0,0,3.06155844543851,0,0,25.2788028013583,29.3643879765978,51.6808767703518,40.060865642794,30.8123862740821,34.58426234106,43.3491823187081,19.9557459589774,0,0,0,7.22129049378186,8.47796691328311,5.9209113316087,0,0,0,0,0,0.485510353031154,0.377690453926732,0.506884656097573,1.83546752161682,0,0,0,0.194429899074283,0.699932108126813,1.43752564364972,0.167782606057736,0,0.336093799142464,0,0,0,0,0,0,2.37191172448392,0,0,0,0,3.89480143673926,1.15265491596466,0,0.135005938331691,0.210324961351382,0.285650984403804,0.441737081903227,0,0,0,0,1.53224805702225,0.153606533256243,0,0.274462930807229,0,0,0.56276261003168,0.30559649555362,0,0,0.372798891650601,0,0.0755715601067855,6.08715426273523,12.0459342777394,16.9992833426938,15.6513925574967,24.0417274455638,23.7454250161588,10.5333315098814,0.170430322578058,0,0.35333957451034,9.85903938436764,0,0,0,9.95858788651585,8.36087556067825,7.58286667522175,15.0722721229159,0,0.148442139064825,1.21439728736295,1.21786191324856,1.84492397804847,0.150722640552623,0.705532242814229,0.376999773989026,6.92145909656247,1.59059292611903,0,0.485300549842228,0,0,20.5030937339934,1.46390398505774,0.628340120440365,31.1657607354481,0,0,0.127070227073065,0,0,0,0,0.511430914660661,0.41557608911912,0.162241263067758,5.6011650117674,2.61254638281195,12.6361379216837,5.26104639716185,2.73252930221678,1.60931473103431,2.16074555766419,2.41127708537144,2.10913147369116,1.15302348256365,0.843315521037559,3.10444044886819,5.6047678162539,3.78212160335639,3.87092473160687,4.82230611340665,9.45360647367033,14.626590993931,17.0799173218593,2.7864797354589,0,0,0,2.48550927042602,2.57978665979206,0.900310307305074,0.710234206755631,0.787056926989615,0.462801338662135,0.697601834251224,0,0.700592054203017,0.329119699826961,0.492502392237286,0.56748166682099,0.438599962275997,0.439100230582101,0.134206418760372,0,0,53.8582616263591,39.9320355661952,1.2797295032114,1.62565670302307,2.83508414908605,6.05050573870028,6.44896327150124,7.60902504450237,29.4208018157597,20.4226703857773,10.8074139784116,9.15199771389294,14.2323783596958,35.9527763461689,19.2362864388478,21.1089749649629,1.89667900953082,2.39921876480431,3.38123207019241,3.25842124552503,1.93952487167626,4.34842083319975,5.24863258131335,6.05201606716369,5.80895293013087,8.02081565491703,19.862326014839,0.500535317148282,1.96558995113203,1.57403478669398,3.65148218499305,3.85883455603867,6.62027214631691,10.0693648107784,7.62035565842666,15.6500005517206,28.7536413054709,24.9334434937897,35.5722947350599,32.3300963772303,19.9131129009323,17.8504102904446,6.83586803616437,3.03186258832776,4.4000543639347,5.60158783058121,7.97946844180907,11.3904255060435,12.1402256851867,17.9522956029175,9.45810864637146,9.52298165489732,11.0023790373666,12.4536119183961,9.32498902075836,7.95569822198314,0,0,4.91764273019036,3.86311444826625,0.160550589987792,0.586058432961016,0.655739781506702,0.252470927204373,0.315508219416257,0.780877488593277,0.646270193198397,0.238968797952552,0,0,0,0,0,0.321321316421807,1.41940085208269,7.30068975035746,4.23506094319298,2.8044920905331,2.65490276679926,4.37005145078967,5.74414758233027,5.84675747243284,5.90603785761546,5.84126781093462,9.56184684722418,6.18007340111759,5.34746067577082,3.47640433729398,4.21674434299995,4.12542172992747,3.40439605753788,3.6012218806262,5.04498866752743,5.5727629108214,3.01478397191865,2.85390108163313,2.46823530903181,3.34911444026059,3.98941903708308,5.50763384245932,5.95426674748397,36.6047481530086,26.4801659781285,28.5280134910177,39.6316182090413,35.4544343449332,29.7310453362448,0.556275906031529,0,2.27025554759545,0.740778109478847,0,0,0,0.509935289981566,0.839708713941948,0.138199973804424,8.59203556213602,3.16335993581135,7.31950081656655,11.6645768087545,13.7998275369549,12.4466661335321,13.2167059457124,16.2000773221658,13.3495530411855,15.2945668484316,13.6694648879124,0,1.94371509857172,0.827292452285488,2.13896307178452,1.93739735216597,1.35164900392623,1.17357238645754,3.3853140059427,2.51662426621706,0.241584120826006,0.288030006257865,1.58005560314089,3.04087822935246,4.41657115808757,1.94881234466693,1.9692936523423,1.78813219303138,1.44234539423963,1.18151621739662,0.504832249740738,1.37172251979,0.201652370273681,0.38983152295901,0.865906574762965,1.63627663054197,26.3007244993645,5.54964883435162,2.9605572681127,3.52557694364565,17.5802530569293,3.94133198447482,7.8755198434924,36.6569928225203,9.5298699766719,0.564751842617067,0.460325236507177,0,0,0,0,0,0,0,0,0.518936737920883,3.59122386060928,2.39027048055788,5.83456120963906,0.628839487883947,1.83843508450014,4.4449345560323,3.29656091582231,4.49286893428541,3.53776096469316,3.8021894983536,3.9611531691076,3.55837728385553,3.84150914429216,2.87177344778066,3.33405583898152,4.75125736373908,2.70072908649187,5.76920261124629,3.679973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|short_description=p1@Epha1
}}
}}

Latest revision as of 05:55, 27 September 2015

Short description:p1@Epha1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Epha1_5end
Coexpression cluster:MCL_coexpression_mm9:24
Association with transcript: 0bp_to_ENSMUST00000073387, NM_023580, uc009brc.1, uc009brd.1_5end
EntrezGene:Epha1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Epha1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G75.12
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I562.47
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I668.25
CD326+ enterocyte, pool1.CNhs13542.11848-124I3131.57
CD326+ enterocyte, pool2.CNhs13197.11849-124I4171.81
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I729.55
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I820.32
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.16
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A33.06
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D125.28
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D229.36
GP2+ M cell, pool1.CNhs13228.11845-124H951.68
GP2+ M cell, pool2.CNhs13231.11846-124I140.06
GP2+ M cell, pool3.CNhs13240.11847-124I230.81
Ileum epithelium, pool1.CNhs13199.10252-104B934.58
Ileum epithelium, pool2.CNhs13232.10253-104C143.35
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C819.96
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F57.22
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F68.48
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F75.92
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.49
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.38
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.51
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B31.84
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.70
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.17
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.34
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C62.37
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C83.89
Mouse Microglia, donor2.CNhs12634.11736-123E81.15
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.14
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.21
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.29
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.44
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F31.53
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.15
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.27
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.56
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.31
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.00
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.37
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.08
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G36.09
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F712.05
Mouse hepatocyte, donor1.CNhs13078.11714-123C417.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C815.65
Mouse hepatocyte, donor6.CNhs13090.11822-124F424.04
Mouse hepatocyte, donor8.CNhs13091.11824-124F623.75
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A710.53
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.17
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.35
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G69.86
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G19.96
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G28.36
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G37.58
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B615.07
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.15
adrenal gland, embryo E14.CNhs11038.406-44C51.21
adrenal gland, embryo E16.CNhs11004.1254-43D61.22
adrenal gland, embryo E17.CNhs11043.1263-45I11.84
adrenal gland, embryo E18.CNhs11026.1262-18F50.15
adrenal gland, neonate N00.CNhs11191.1311-23C10.71
adrenal gland, neonate N25.CNhs11223.1377-27I30.38
amnion, adult pregnant day17.5.CNhs10488.583-22A86.92
aorta, adult.CNhs10498.46-23H11.59
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.49
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H420.50
cerebellum, adult.CNhs10494.15-8B21.46
cerebellum, neonate N30.CNhs11135.1395-42I20.63
colon, adult.CNhs10468.36-18H731.17
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.13
corpora quadrigemina, adult.CNhs10501.16-22A40.00
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.00
cortex, adult.CNhs10473.12-14D50.00
cortex, neonate N30.CNhs11107.1392-42F20.51
diencephalon, adult.CNhs10482.20-12F20.42
diencephalon, neonate N30.CNhs11201.1388-42B20.16
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B15.60
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A22.61
epididymis, adult.CNhs10490.58-23B212.64
eyeball, adult.CNhs10484.31-12G45.26
eyeball, embryo E12.CNhs11016.345-16C62.73
eyeball, embryo E14.CNhs10521.399-16E21.61
eyeball, embryo E15.CNhs10593.426-16C92.16
eyeball, embryo E17.CNhs11023.1261-18D42.41
eyeball, neonate N00.CNhs11207.633-15C62.11
eyeball, neonate N01.CNhs11140.1532-43E71.15
eyeball, neonate N02.CNhs11205.1551-44G80.84
eyeball, neonate N16.CNhs11188.777-19A23.10
forelimb, embryo E11.CNhs10596.335-25E25.60
forelimb, embryo E12.CNhs10600.359-14H23.78
forelimb, embryo E13.CNhs10589.384-1E23.87
forelimb, embryo E14.CNhs10577.413-26A84.82
forelimb, embryo E15.CNhs11007.437-20E79.45
forelimb, embryo E17.CNhs10598.1517-43C414.63
forelimb, embryo E18.CNhs11008.1520-43B517.08
gonad, embryo E13.CNhs11044.1564-45I62.79
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E92.49
heart, embryo E12.CNhs11015.353-12F52.58
heart, embryo E13.CNhs11013.376-3I90.90
heart, embryo E14.CNhs10597.403-26D40.71
heart, embryo E15.CNhs11017.431-16C80.79
heart, embryo E16.CNhs11021.457-17C60.46
heart, embryo E17.CNhs11025.479-18E50.70
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.70
heart, neonate N03.CNhs11221.1349-25I20.33
heart, neonate N10.CNhs11118.749-24G10.49
heart, neonate N16.CNhs11209.782-15G10.57
heart, neonate N20.CNhs11127.821-26I60.44
heart, neonate N25.CNhs11196.1351-25D30.44
heart, neonate N30.CNhs11202.1390-42D20.13
hippocampus, adult.CNhs10478.13-16E80.00
hippocampus, neonate N00.CNhs11228.627-43G10.00
intestinal mucosa, adult.CNhs10506.860-29I353.86
intestine, adult.CNhs10496.178-9A339.93
intestine, embryo E12.CNhs11019.1251-16I51.28
intestine, embryo E13.CNhs11010.381-16D51.63
intestine, embryo E15.CNhs10602.976-16D82.84
intestine, embryo E16.CNhs10585.463-22H46.05
intestine, embryo E17.CNhs10582.482-18D36.45
intestine, embryo E18.CNhs10526.1289-20F77.61
intestine, neonate N00.CNhs11126.644-26D129.42
intestine, neonate N01.CNhs11192.1322-23E920.42
intestine, neonate N06.CNhs11102.688-20B810.81
intestine, neonate N07.CNhs11095.720-20F29.15
intestine, neonate N10.CNhs11098.755-23A514.23
intestine, neonate N20.CNhs11187.827-18D135.95
intestine, neonate N25.CNhs11121.1352-25E319.24
intestine, neonate N30.CNhs11131.1384-42G121.11
kidney, embryo E14.CNhs10606.411-4I91.90
kidney, embryo E15.CNhs10997.434-16F82.40
kidney, embryo E16.CNhs10584.464-22A53.38
kidney, embryo E17.CNhs11028.483-18I23.26
kidney, embryo E18.CNhs11001.1288-20C71.94
kidney, neonate N00.CNhs11214.646-21G74.35
kidney, neonate N10.CNhs11206.758-6D55.25
kidney, neonate N20.CNhs11113.832-19I16.05
kidney, neonate N25.CNhs11122.1353-25F35.81
kidney, neonate N30.CNhs11203.1385-42H18.02
liver, adult pregnant day01.CNhs10466.508-5B219.86
liver, embryo E12.CNhs10601.355-15F80.50
liver, embryo E13.CNhs10524.378-3H61.97
liver, embryo E14.CNhs10594.409-16E11.57
liver, embryo E15.CNhs10520.433-16D73.65
liver, embryo E16.CNhs10523.462-17F53.86
liver, embryo E17.CNhs10510.481-18A36.62
liver, embryo E18.CNhs10579.499-43G410.07
liver, neonate N00.CNhs11117.641-24F47.62
liver, neonate N03.CNhs11123.1345-25G215.65
liver, neonate N06.CNhs11101.684-20A828.75
liver, neonate N07.CNhs11103.716-20H224.93
liver, neonate N10.CNhs11115.751-24B935.57
liver, neonate N20.CNhs11220.823-25A332.33
liver, neonate N25.CNhs11198.1368-26H119.91
liver, neonate N30.CNhs11106.1382-42D117.85
lung, adult.CNhs10474.28-22B16.84
lung, embryo E12.CNhs10522.354-16G23.03
lung, embryo E14.CNhs10604.404-26F84.40
lung, embryo E15.CNhs11020.432-17C55.60
lung, embryo E16.CNhs10998.458-17B67.98
lung, embryo E17.CNhs10605.480-44A611.39
lung, embryo E18.CNhs10583.1287-20I612.14
lung, neonate N00.CNhs11224.640-42C617.95
lung, neonate N06.CNhs11212.683-20E59.46
lung, neonate N07.CNhs11111.715-19A39.52
lung, neonate N10.CNhs11219.750-23E611.00
lung, neonate N20.CNhs11109.822-18A412.45
lung, neonate N25.CNhs11119.1359-25C79.32
lung, neonate N30.CNhs11133.1394-42H27.96
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B64.92
mammary gland, adult pregnant day19.CNhs10476.588-5H23.86
medulla oblongata, adult.CNhs10477.17-12C20.16
medulla oblongata, neonate N30.CNhs11200.1396-42A30.59
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.66
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.78
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.65
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.32
ovary, adult.CNhs10507.91-2I71.42
ovary, embryo E18.CNhs11040.505-44H77.30
ovary, neonate N00.CNhs11217.1299-22I44.24
oviduct, adult pregnant day01.CNhs10500.988-6G62.80
pancreas, adult.CNhs10486.34-16E42.65
pancreas, embryo E14.CNhs11012.405-44F44.37
pancreas, embryo E15.CNhs11042.1556-45F25.74
pancreas, embryo E16.CNhs11003.460-26E55.85
pancreas, embryo E17.CNhs10599.1558-45G35.91
pancreas, embryo E18.CNhs10580.1535-43I75.84
pancreas, neonate N00.CNhs11105.645-26G99.56
pancreas, neonate N01.CNhs11138.1531-43D76.18
pancreas, neonate N02.CNhs11139.1539-43D85.35
pancreas, neonate N16.CNhs11136.787-43B63.48
pancreas, neonate N25.CNhs11094.1555-45E24.22
pancreas, neonate N30.CNhs11182.1548-44H54.13
pituitary gland, adult.CNhs10493.21-1G83.40
pituitary gland, embryo E12.CNhs11018.346-16E63.60
pituitary gland, embryo E13.CNhs11009.370-44C75.04
pituitary gland, embryo E14.CNhs11037.398-44A55.57
pituitary gland, embryo E15.CNhs10592.427-16B93.01
pituitary gland, embryo E16.CNhs11036.449-43F62.85
pituitary gland, embryo E17.CNhs11039.1265-44F52.47
pituitary gland, neonate N00.CNhs11190.1308-22E93.35
placenta, adult pregnant day10.CNhs10472.539-13I73.99
placenta, adult pregnant day17.CNhs10464.577-18G35.51
prostate, adult.CNhs10470.859-1F85.95
skin, adult.CNhs10492.30-1C336.60
skin, neonate N00.CNhs11124.650-25G426.48
skin, neonate N03.CNhs11215.662-22H328.53
skin, neonate N06.CNhs11097.693-20I539.63
skin, neonate N10.CNhs11108.762-6C435.45
small intestine, neonate N16.CNhs11114.790-21I129.73
spinal cord, adult.CNhs10505.24-13C90.56
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C12.27
spleen, embryo E18.CNhs11011.1271-21F20.74
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.51
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.84
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.14
stomach, adult.CNhs10503.33-1H68.59
stomach, embryo E12.CNhs10588.356-43E33.16
stomach, embryo E15.CNhs10603.1252-16G87.32
stomach, embryo E16.CNhs11022.459-17D411.66
stomach, embryo E17.CNhs11006.1035-18D513.80
stomach, embryo E18.CNhs10999.1286-20C612.45
stomach, neonate N03.CNhs11193.1340-24B813.22
stomach, neonate N07.CNhs11210.718-18A916.20
stomach, neonate N25.CNhs11104.1355-25E413.35
stomach, neonate N30.CNhs11134.1386-42I115.29
submandibular gland, adult.CNhs10469.59-29C113.67
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F51.94
testis, embryo E15.CNhs11034.443-27C50.83
testis, embryo E16.CNhs11033.470-26G52.14
testis, embryo E17.CNhs11029.486-18I51.94
testis, embryo E18.CNhs11027.503-18G51.35
testis, neonate N00.CNhs11189.1300-22B71.17
testis, neonate N07.CNhs11222.726-26I43.39
testis, neonate N10.CNhs11204.763-44D92.52
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B51.58
thymus, embryo E14.CNhs11041.402-44I43.04
thymus, embryo E15.CNhs11005.430-45I24.42
thymus, embryo E16.CNhs11002.456-26C51.95
thymus, embryo E17.CNhs10581.478-18C11.97
thymus, embryo E18.CNhs10595.1273-19G41.79
thymus, neonate N02.CNhs11181.1541-43F81.44
thymus, neonate N03.CNhs11137.2104-43C71.18
thymus, neonate N06.CNhs11197.681-26C40.50
thymus, neonate N07.CNhs11211.713-19D31.37
thymus, neonate N10.CNhs11194.748-24E40.20
thymus, neonate N20.CNhs11186.820-7A20.39
thymus, neonate N25.CNhs11125.1362-25G70.87
thymus, neonate N30.CNhs11132.1393-42G21.64
tongue, adult.CNhs10499.32-1B426.30
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H35.55
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F72.96
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G53.53
urinary bladder, adult.CNhs10481.879-12E417.58
uterus, adult pregnant day19.CNhs10497.590-15F53.94
uterus, adult.CNhs10509.92-27E57.88
vagina, adult.CNhs10502.89-27D536.66
vesicular gland, adult.CNhs10491.51-27F89.53
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.56
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.46
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.00
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.52
whole body, embryo E12.CNhs10587.857-27C93.59
whole body, embryo E13.CNhs10512.372-23H22.39
whole body, embryo E14.5.CNhs10578.420-27D25.83
whole body, embryo E14.CNhs10519.395-14B10.63
whole body, embryo E16.CNhs10514.453-14F21.84
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G54.44
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G53.30
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G54.49
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G53.54
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G53.80
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G53.96
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G53.56
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G53.84
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G52.87
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G53.33
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G54.75
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G52.70
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G55.77
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G53.68
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G53.77
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G54.44
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G53.58
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G52.91
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G53.39
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G53.47
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G54.39
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G53.42
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G53.12
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G54.49
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G55.10
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G53.35
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G55.73
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G54.49
whole body, embryo E17.5.CNhs10513.490-9F97.33
whole body, embryo E17.CNhs10517.475-3I56.99
whole body, embryo E18.CNhs10516.493-3B38.19
whole body, neonate N00.CNhs10525.657-19C28.81
whole body, neonate N01.CNhs10576.659-23C63.06
whole body, neonate N06.CNhs10515.692-21D15.96
whole body, neonate N10.CNhs10518.761-6B40.93





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
epithelial cell1.73e-0825

Uber anatomy
Ontology termp-valuen
endoderm-derived structure4.45e-20118
endoderm4.45e-20118
presumptive endoderm4.45e-20118
digestive system1.03e-19116
digestive tract1.03e-19116
primitive gut1.03e-19116
subdivision of digestive tract1.54e-18114
intestine4.50e-1431
gastrointestinal system4.84e-1347
mucosa1.06e-0915
trunk region element2.04e-0979
intestinal mucosa1.55e-0813
wall of intestine1.55e-0813
gastrointestinal system mucosa1.55e-0813
digestive tract diverticulum1.10e-0723
sac1.10e-0723
exocrine gland1.14e-0725
exocrine system1.14e-0725
subdivision of trunk2.46e-0766
liver3.46e-0722
epithelial sac3.46e-0722
digestive gland3.46e-0722
epithelium of foregut-midgut junction3.46e-0722
anatomical boundary3.46e-0722
hepatobiliary system3.46e-0722
foregut-midgut junction3.46e-0722
hepatic diverticulum3.46e-0722
liver primordium3.46e-0722
septum transversum3.46e-0722
liver bud3.46e-0722
trunk5.51e-0790
endo-epithelium7.97e-0769
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