FFCP PHASE1:Mm9::chr18:43553000..43553035,-: Difference between revisions
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m (moved FFCP PHASE1 mm9::chr18:43553000..43553035,- to FFCP PHASE1:Mm9::chr18:43553000..43553035,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=22240 | |EntrezGene=22240 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=22 | |||
|TSSclassifier=NA | |||
|UniProt=Q62188 | |UniProt=Q62188 | ||
|association_with_transcript=0bp_to_ENSMUST00000025379_5end | |||
|cluster_id=chr18:43553000..43553035,- | |||
|description=CAGE_peak_3_at_Dpysl3_5end | |||
|id=chr18:43553000..43553035,- | |||
|ontology_enrichment_celltype=CL:0000540!3.94e-14!33;CL:0000047!3.94e-14!33;CL:0000031!3.94e-14!33;CL:0000404!3.94e-14!33;CL:0000393!5.25e-14!39;CL:0000211!5.25e-14!39;CL:0002319!8.47e-13!43;CL:0000221!1.36e-12!44;CL:0000133!1.36e-12!44;CL:0000055!3.97e-12!50;CL:0000117!2.33e-09!23;CL:0000337!2.33e-09!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,3.00e-14,33;CL:0000047,3.00e-14,33;CL:0000031,3.00e-14,33;CL:0000404,3.00e-14,33;CL:0000393,4.01e-14,39;CL:0000211,4.01e-14,39;CL:0002319,6.64e-13,43;CL:0000221,1.07e-12,44;CL:0000133,1.07e-12,44;CL:0000117,1.97e-09,23;CL:0000337,1.97e-09,23 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!7.33e-14!102;UBERON:0000924!7.33e-14!102;UBERON:0006601!7.33e-14!102;UBERON:0001017!3.66e-12!73;UBERON:0005743!3.66e-12!73;UBERON:0000073!4.11e-12!75;UBERON:0001016!4.11e-12!75;UBERON:0002346!9.17e-11!71;UBERON:0003075!9.17e-11!71;UBERON:0007284!9.17e-11!71;UBERON:0000468!1.31e-09!333;UBERON:0000922!1.34e-07!328;UBERON:0003056!5.07e-07!49;UBERON:0000479!5.36e-07!349 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004121,1.96e-12,95;UBERON:0000924,1.96e-12,95;UBERON:0006601,1.96e-12,95;UBERON:0010314,2.47e-12,92;UBERON:0001017,3.99e-12,73;UBERON:0001016,4.47e-12,75;UBERON:0002346,1.27e-09,64;UBERON:0003075,1.27e-09,64;UBERON:0007284,1.27e-09,64;UBERON:0010371,6.75e-08,73;UBERON:0000922,2.04e-07,320;UBERON:0003056,4.50e-07,49 | |||
|phase1_expression=4.00372117761985,0,0.454999239389536,0,0,1.6787927191189,3.03696432774183,0,0,0,0,0,0,0,0.666219523631325,0.202475267389826,0,0,0,0,1.61582251287033,0,0,6.87967418011649,5.04700418347774,0,0,0.430942465371778,3.04037471130198,0.252030129759931,0.665191531965914,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0,3.02152363141385,5.47435428585379,9.17733760808408,4.69434806608824,7.84890562969608,2.41654801007919,1.94429899074283,14.4186014274123,11.5002051491977,0,0,0,16.9791227783725,14.0401385569991,6.70373719960675,127.864003263266,168.748122387778,128.033943508248,11.1818695582814,8.89294796111139,0.449949858640699,0,0.7104801149461,8.38880309451533,6.14749288514487,87.5140327883551,115.160065396932,100.114681603258,23.1377297367081,20.3199057675484,98.9725657656829,109.934755257917,100.194847740492,7.70811166995721,5.61824287574826,3.99376986466233,202.577337953578,224.785140331121,185.966073288763,1.3959149950069,5.06486349028512,4.27835093775068,51.5600024578918,47.1250263445031,87.6077395378913,2.87759534666099,11.5624486963382,1.73918693221007,0,0,0,0.649776417447669,0,2.24711072210803,3.91989741929533,5.97507810586598,8.48014978824817,4.50698943285378,3.84979432242953,5.09610479413291,0,3.89683873820185,4.05375784760158,4.54972000513305,0.68510327831436,1.8125651855302,3.56261133755579,18.7364152907427,32.5778061793991,18.6798552777407,18.5388847879726,15.7568867561844,1.38233250462643,1.23597483867187,5.06097749219691,4.42305275974937,5.98537344805414,5.30019644304944,5.81850303762267,0,2.04946557908083,0.83778682725382,0.766371165625774,0,0,0,5.54225365797844,2.28750301409313,104.795729662129,3.99795936442236,4.60287823194595,6.64921742590592,5.353961681236,9.57290020192973,4.10543003013307,1.76905930903572,3.57751155007006,13.1421647392331,27.1284483231498,28.0896922496345,29.3874394779644,22.7922272156948,24.0853794135518,20.5206776785806,5.95017752699736,4.74249584452253,6.42960672570586,10.0292140773451,9.64461222681329,10.5657954705727,11.8405736617537,7.81972118350185,6.56813080501028,0,0,0,27.9619792922928,27.6740750777694,24.308378297237,22.9642393517654,24.9890574319203,19.9004575624718,14.6496385192757,13.413670069981,3.26942958628075,2.79751744852917,5.41752631461014,3.56702762001765,2.63159977365598,3.73235195994786,1.47627060636409,3.57492912559016,90.453154281391,0.991256348951394,1.05780226665418,11.5175655289026,12.5407802804637,10.4382643670896,8.67239155880373,8.00560957841533,5.1360919050391,0.949058123089023,4.77626968699632,6.03204501120647,6.96347652144028,3.50935356814416,1.79763881730844,2.16138049874694,0.796565093017469,2.27601481143698,6.28366819353509,6.76246414038483,5.49858585182348,4.46090720485539,4.48869247298039,4.48979413582227,1.32849133181642,1.255989822731,1.23397163921801,0,1.16791574001266,1.37591296579242,0.674586337154561,1.21716072833102,0.72353147925725,0.763877555344259,1.15078454980324,0.486405680325106,0,1.43768206527355,2.97712758134803,0.936113019343682,0.505157755894224,0,0,3.51031061316549,6.63219941196697,5.21487924614483,4.2436271443797,1.87752198630802,2.68010011906905,2.38043640886014,2.53673742215138,6.62067605246002,6.86540537911202,9.08892181347676,4.26044618260919,6.21665934717224,4.19482269886384,0,0,1.47529281905711,3.86311444826625,5.77982123956051,5.74337264301796,2.45902418065013,2.27223834483936,47.6417411318548,49.5857205256731,66.7812532971677,42.2974772376017,40.7721573570781,40.1968673720142,59.9119838478844,64.2962887404886,68.3847855847486,8.9969968598106,10.5035663054119,7.65682095769198,5.37526965866801,9.07335676348945,0,4.85561272309963,4.23252979750651,4.33791683438566,3.54362271456927,3.68922177532713,5.68542244970086,3.99887102425256,4.9909632973861,1.58018378967908,0,1.03135543248187,1.70219802876894,13.8647042404109,10.6074120701859,14.7892554171799,12.7684968222437,18.5503570306153,17.6067452044269,8.52501857520878,1.40803024838226,3.38931313382112,2.20528398054962,0.98931751764888,4.19807509409354,3.98065304525829,4.65552141612232,2.79039529566604,2.33184669303881,5.56275906031529,1.87957968877638,10.3193433981611,9.07453184111587,1.13021074202815,2.05041341581538,2.0590035588587,0,0,0,2.86401185404534,15.1841276918945,13.419084830372,7.34436317588249,7.52717865652087,7.42432716737004,5.12484516262319,5.95104881222419,4.71160695571253,0.777689839750757,14.9121435140862,0,4.03694674318743,3.80554528051325,11.2781689239548,13.432621641684,12.5027532863176,6.57200536416222,4.55715346953825,2.20204623293993,1.44950472495604,1.15212002503146,2.21207784439725,6.68993210457542,7.29247795870273,3.50786222040047,4.29664069601955,3.17890167650024,0.721172697119813,1.18151621739662,0.201932899896295,0.990688486514998,0.806609481094724,1.16949456887703,0.769694733122636,0.584384510907845,1.58711268530648,0.221985953374065,0.0897138566094757,0,11.7845652359636,0.93841237725591,7.14291334642334,2.14368379079066,2.50786052017682,10.7302850097243,9.66682996665071,11.4579102687879,10.998603669996,2.05524755931193,3.021575589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| |phase1_expression=4.00372117761985,0,0.454999239389536,0,0,1.6787927191189,3.03696432774183,0,0,0,0,0,0,0,0.666219523631325,0.202475267389826,0,0,0,0,1.61582251287033,0,0,6.87967418011649,5.04700418347774,0,0,0.430942465371778,3.04037471130198,0.252030129759931,0.665191531965914,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0,3.02152363141385,5.47435428585379,9.17733760808408,4.69434806608824,7.84890562969608,2.41654801007919,1.94429899074283,14.4186014274123,11.5002051491977,0,0,0,16.9791227783725,14.0401385569991,6.70373719960675,127.864003263266,168.748122387778,128.033943508248,11.1818695582814,8.89294796111139,0.449949858640699,0,0.7104801149461,8.38880309451533,6.14749288514487,87.5140327883551,115.160065396932,100.114681603258,23.1377297367081,20.3199057675484,98.9725657656829,109.934755257917,100.194847740492,7.70811166995721,5.61824287574826,3.99376986466233,202.577337953578,224.785140331121,185.966073288763,1.3959149950069,5.06486349028512,4.27835093775068,51.5600024578918,47.1250263445031,87.6077395378913,2.87759534666099,11.5624486963382,1.73918693221007,0,0,0,0.649776417447669,0,2.24711072210803,3.91989741929533,5.97507810586598,8.48014978824817,4.50698943285378,3.84979432242953,5.09610479413291,0,3.89683873820185,4.05375784760158,4.54972000513305,0.68510327831436,1.8125651855302,3.56261133755579,18.7364152907427,32.5778061793991,18.6798552777407,18.5388847879726,15.7568867561844,1.38233250462643,1.23597483867187,5.06097749219691,4.42305275974937,5.98537344805414,5.30019644304944,5.81850303762267,0,2.04946557908083,0.83778682725382,0.766371165625774,0,0,0,5.54225365797844,2.28750301409313,104.795729662129,3.99795936442236,4.60287823194595,6.64921742590592,5.353961681236,9.57290020192973,4.10543003013307,1.76905930903572,3.57751155007006,13.1421647392331,27.1284483231498,28.0896922496345,29.3874394779644,22.7922272156948,24.0853794135518,20.5206776785806,5.95017752699736,4.74249584452253,6.42960672570586,10.0292140773451,9.64461222681329,10.5657954705727,11.8405736617537,7.81972118350185,6.56813080501028,0,0,0,27.9619792922928,27.6740750777694,24.308378297237,22.9642393517654,24.9890574319203,19.9004575624718,14.6496385192757,13.413670069981,3.26942958628075,2.79751744852917,5.41752631461014,3.56702762001765,2.63159977365598,3.73235195994786,1.47627060636409,3.57492912559016,90.453154281391,0.991256348951394,1.05780226665418,11.5175655289026,12.5407802804637,10.4382643670896,8.67239155880373,8.00560957841533,5.1360919050391,0.949058123089023,4.77626968699632,6.03204501120647,6.96347652144028,3.50935356814416,1.79763881730844,2.16138049874694,0.796565093017469,2.27601481143698,6.28366819353509,6.76246414038483,5.49858585182348,4.46090720485539,4.48869247298039,4.48979413582227,1.32849133181642,1.255989822731,1.23397163921801,0,1.16791574001266,1.37591296579242,0.674586337154561,1.21716072833102,0.72353147925725,0.763877555344259,1.15078454980324,0.486405680325106,0,1.43768206527355,2.97712758134803,0.936113019343682,0.505157755894224,0,0,3.51031061316549,6.63219941196697,5.21487924614483,4.2436271443797,1.87752198630802,2.68010011906905,2.38043640886014,2.53673742215138,6.62067605246002,6.86540537911202,9.08892181347676,4.26044618260919,6.21665934717224,4.19482269886384,0,0,1.47529281905711,3.86311444826625,5.77982123956051,5.74337264301796,2.45902418065013,2.27223834483936,47.6417411318548,49.5857205256731,66.7812532971677,42.2974772376017,40.7721573570781,40.1968673720142,59.9119838478844,64.2962887404886,68.3847855847486,8.9969968598106,10.5035663054119,7.65682095769198,5.37526965866801,9.07335676348945,0,4.85561272309963,4.23252979750651,4.33791683438566,3.54362271456927,3.68922177532713,5.68542244970086,3.99887102425256,4.9909632973861,1.58018378967908,0,1.03135543248187,1.70219802876894,13.8647042404109,10.6074120701859,14.7892554171799,12.7684968222437,18.5503570306153,17.6067452044269,8.52501857520878,1.40803024838226,3.38931313382112,2.20528398054962,0.98931751764888,4.19807509409354,3.98065304525829,4.65552141612232,2.79039529566604,2.33184669303881,5.56275906031529,1.87957968877638,10.3193433981611,9.07453184111587,1.13021074202815,2.05041341581538,2.0590035588587,0,0,0,2.86401185404534,15.1841276918945,13.419084830372,7.34436317588249,7.52717865652087,7.42432716737004,5.12484516262319,5.95104881222419,4.71160695571253,0.777689839750757,14.9121435140862,0,4.03694674318743,3.80554528051325,11.2781689239548,13.432621641684,12.5027532863176,6.57200536416222,4.55715346953825,2.20204623293993,1.44950472495604,1.15212002503146,2.21207784439725,6.68993210457542,7.29247795870273,3.50786222040047,4.29664069601955,3.17890167650024,0.721172697119813,1.18151621739662,0.201932899896295,0.990688486514998,0.806609481094724,1.16949456887703,0.769694733122636,0.584384510907845,1.58711268530648,0.221985953374065,0.0897138566094757,0,11.7845652359636,0.93841237725591,7.14291334642334,2.14368379079066,2.50786052017682,10.7302850097243,9.66682996665071,11.4579102687879,10.998603669996,2.05524755931193,3.021575589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| ||
|short_description=p3@Dpysl3 | |||
}} | }} |
Latest revision as of 07:14, 27 September 2015
Short description: | p3@Dpysl3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Dpysl3_5end |
Coexpression cluster: | MCL_coexpression_mm9:22 |
Association with transcript: | 0bp_to_ENSMUST00000025379_5end |
EntrezGene: | Dpysl3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 3.00e-14 | 33 |
neuronal stem cell | 3.00e-14 | 33 |
neuroblast | 3.00e-14 | 33 |
electrically signaling cell | 3.00e-14 | 33 |
electrically responsive cell | 4.01e-14 | 39 |
electrically active cell | 4.01e-14 | 39 |
neural cell | 6.64e-13 | 43 |
ectodermal cell | 1.07e-12 | 44 |
neurectodermal cell | 1.07e-12 | 44 |
CNS neuron (sensu Vertebrata) | 1.97e-09 | 23 |
neuroblast (sensu Vertebrata) | 1.97e-09 | 23 |
Ontology term | p-value | n |
---|---|---|
ectoderm-derived structure | 1.96e-12 | 95 |
ectoderm | 1.96e-12 | 95 |
presumptive ectoderm | 1.96e-12 | 95 |
structure with developmental contribution from neural crest | 2.47e-12 | 92 |
central nervous system | 3.99e-12 | 73 |
nervous system | 4.47e-12 | 75 |
neurectoderm | 1.27e-09 | 64 |
neural plate | 1.27e-09 | 64 |
presumptive neural plate | 1.27e-09 | 64 |
ecto-epithelium | 6.75e-08 | 73 |
embryo | 2.04e-07 | 320 |
pre-chordal neural plate | 4.50e-07 | 49 |