FFCP PHASE1:Mm9::chr13:24247072..24247085,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=68732 | |EntrezGene=68732 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=225 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENSMUST00000144159_5end | |association_with_transcript=0bp_to_ENSMUST00000144159_5end | ||
|cluster_id=chr13:24247072..24247085,- | |||
|description=CAGE_peak_6_at_Lrrc16a_5end | |description=CAGE_peak_6_at_Lrrc16a_5end | ||
|id=chr13:24247072..24247085,- | |id=chr13:24247072..24247085,- | ||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000026!3.03e-08!13;UBERON:0004708!3.03e-08!13;UBERON:0002101!3.03e-08!13;UBERON:0004357!3.03e-08!13;UBERON:0009872!3.03e-08!13;UBERON:0004347!3.03e-08!13;UBERON:0005732!3.03e-08!13;UBERON:0005733!3.03e-08!13;UBERON:0003102!9.28e-07!23 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000026,4.42e-09,12;UBERON:0004708,4.42e-09,12;UBERON:0002101,4.42e-09,12;UBERON:0004357,4.42e-09,12;UBERON:0004347,4.42e-09,12;UBERON:0005732,4.42e-09,12;UBERON:0005733,4.42e-09,12;UBERON:0010707,2.69e-08,13;UBERON:0005418,3.00e-08,5;UBERON:0002472,3.00e-08,5;UBERON:0008784,3.00e-08,5;UBERON:0006058,3.00e-08,5;UBERON:0004709,3.00e-08,5;UBERON:0002529,3.00e-08,5;UBERON:0010538,3.00e-08,5;UBERON:0005420,3.00e-08,5;UBERON:0010758,3.00e-08,5;UBERON:0000978,3.00e-08,5;UBERON:0002103,3.00e-08,5;UBERON:0000376,3.00e-08,5;UBERON:0000154,3.00e-08,5;UBERON:0010709,3.00e-08,5;UBERON:0005730,3.00e-08,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285650984403804,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294628585473668,0,0,0,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23517741427141,0,0,0,0,6.30890714794896,5.07935492458905,5.33362778448744,0,0,0.209446706813455,0,0,0,0,0,0,0,0,0,0,0,0,3.85661608891288,0,0,0,0,0,0.30140963567143,0,0.2562274405697,0,0,1.07783996466421,0,0.175951124163949,0.657587197282725,0.278047249225598,2.43776516565517,2.46938563689532,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0,0,0,0.126473074248515,0,0,0,0,0.166845105716094,0.196558995113203,0.224862112384854,0.202860121388503,0,0.25462585178142,2.01387296215567,3.40483976227574,0.549122826376163,0,0,0.312037673114561,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00988370881749,0,0,0,0,0,0,0,0,0,0.321321316421807,0.141940085208269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354680467284547,0.178368817602071,0,0.913394847343798,0.23467170806371,0.63549621259146,0.220528398054962,0.16488625294148,0,0.180938774784468,0.119372344003136,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.51776031175182,0,0,0,1.21553358534147,2.09613162627982,1.47074806760011,2.00022055021454,1.85431551515005,0.962757628775446,1.26348605881899,2.5347929989024,0.943131706930381,1.49826411951812,1.34452820050225,1.43588672389033,1.90517476513229,1.39061191133827,2.12200142510076,2.06042950401653,1.32479028120958,0.685738504770831,1.4198064492747,0.715308569841963,1.74415699958794,1.31753132581463,0.930760686808441,0.914639864363863,1.31534855718921,0.950628796921032,1.12228454331548,1.54225523561426,1.97008964751127,1.22769312950907,2.01417893541756,1.35034627686799,1.74867404556562,2.10538447600868,1.93383948643468,0.956441660344217,2.42650561031467,3.94175320554716 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285650984403804,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294628585473668,0,0,0,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23517741427141,0,0,0,0,6.30890714794896,5.07935492458905,5.33362778448744,0,0,0.209446706813455,0,0,0,0,0,0,0,0,0,0,0,0,3.85661608891288,0,0,0,0,0,0.30140963567143,0,0.2562274405697,0,0,1.07783996466421,0,0.175951124163949,0.657587197282725,0.278047249225598,2.43776516565517,2.46938563689532,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0,0,0,0.126473074248515,0,0,0,0,0.166845105716094,0.196558995113203,0.224862112384854,0.202860121388503,0,0.25462585178142,2.01387296215567,3.40483976227574,0.549122826376163,0,0,0.312037673114561,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00988370881749,0,0,0,0,0,0,0,0,0,0.321321316421807,0.141940085208269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354680467284547,0.178368817602071,0,0.913394847343798,0.23467170806371,0.63549621259146,0.220528398054962,0.16488625294148,0,0.180938774784468,0.119372344003136,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.51776031175182,0,0,0,1.21553358534147,2.09613162627982,1.47074806760011,2.00022055021454,1.85431551515005,0.962757628775446,1.26348605881899,2.5347929989024,0.943131706930381,1.49826411951812,1.34452820050225,1.43588672389033,1.90517476513229,1.39061191133827,2.12200142510076,2.06042950401653,1.32479028120958,0.685738504770831,1.4198064492747,0.715308569841963,1.74415699958794,1.31753132581463,0.930760686808441,0.914639864363863,1.31534855718921,0.950628796921032,1.12228454331548,1.54225523561426,1.97008964751127,1.22769312950907,2.01417893541756,1.35034627686799,1.74867404556562,2.10538447600868,1.93383948643468,0.956441660344217,2.42650561031467,3.94175320554716 | ||
|short_description=p6@Lrrc16a | |short_description=p6@Lrrc16a | ||
}} | }} |
Latest revision as of 07:28, 27 September 2015
Short description: | p6@Lrrc16a |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Lrrc16a_5end |
Coexpression cluster: | MCL_coexpression_mm9:225 |
Association with transcript: | 0bp_to_ENSMUST00000144159_5end |
EntrezGene: | Lrrc16a |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
appendage | 4.42e-09 | 12 |
paired limb/fin | 4.42e-09 | 12 |
limb | 4.42e-09 | 12 |
paired limb/fin bud | 4.42e-09 | 12 |
limb bud | 4.42e-09 | 12 |
limb/fin field | 4.42e-09 | 12 |
limb field | 4.42e-09 | 12 |
appendage girdle complex | 2.69e-08 | 13 |
hindlimb bud | 3.00e-08 | 5 |
stylopod | 3.00e-08 | 5 |
lower limb segment | 3.00e-08 | 5 |
multi-limb segment region | 3.00e-08 | 5 |
pelvic appendage | 3.00e-08 | 5 |
limb segment | 3.00e-08 | 5 |
paired limb/fin segment | 3.00e-08 | 5 |
pelvic appendage bud | 3.00e-08 | 5 |
subdivision of organism along appendicular axis | 3.00e-08 | 5 |
leg | 3.00e-08 | 5 |
hindlimb | 3.00e-08 | 5 |
hindlimb stylopod | 3.00e-08 | 5 |
posterior region of body | 3.00e-08 | 5 |
pelvic complex | 3.00e-08 | 5 |
hindlimb/pelvic fin field | 3.00e-08 | 5 |