FFCP PHASE1:Mm9::chr11:32355048..32355099,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=327900 | |EntrezGene=327900 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=0 | |||
|TSSclassifier=NA | |||
|UniProt=Q6PGH0 | |UniProt=Q6PGH0 | ||
|association_with_transcript=-270bp_to_ENSMUST00000051053_5end | |association_with_transcript=-270bp_to_ENSMUST00000051053_5end | ||
|cluster_id=chr11:32355048..32355099,+ | |||
|description=CAGE_peak_2_at_Ubtd2_5end | |description=CAGE_peak_2_at_Ubtd2_5end | ||
|id=chr11:32355048..32355099,+ | |id=chr11:32355048..32355099,+ | ||
|ontology_enrichment_celltype=CL:0000540!9.57e-07!33;CL:0000047!9.57e-07!33;CL:0000031!9.57e-07!33;CL:0000404!9.57e-07!33 | |ontology_enrichment_celltype=CL:0000540!9.57e-07!33;CL:0000047!9.57e-07!33;CL:0000031!9.57e-07!33;CL:0000404!9.57e-07!33 | ||
|ontology_enrichment_celltype_v019_2=CL:0000540,9.36e-07,33;CL:0000047,9.36e-07,33;CL:0000031,9.36e-07,33;CL:0000404,9.36e-07,33 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000468!2.43e-09!333;UBERON:0003056!1.68e-08!49;UBERON:0002346!1.30e-07!71;UBERON:0003075!1.30e-07!71;UBERON:0007284!1.30e-07!71;UBERON:0001017!4.00e-07!73;UBERON:0005743!4.00e-07!73;UBERON:0002780!4.44e-07!39;UBERON:0001890!4.44e-07!39;UBERON:0006240!4.44e-07!39;UBERON:0000922!5.25e-07!328;UBERON:0004121!5.28e-07!102;UBERON:0000924!5.28e-07!102;UBERON:0006601!5.28e-07!102;UBERON:0003080!7.18e-07!40 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003056,1.79e-08,49;UBERON:0010371,3.05e-08,73;UBERON:0002346,4.86e-08,64;UBERON:0003075,4.86e-08,64;UBERON:0007284,4.86e-08,64;UBERON:0000922,1.56e-07,320;UBERON:0004121,3.12e-07,95;UBERON:0000924,3.12e-07,95;UBERON:0006601,3.12e-07,95;UBERON:0001017,3.56e-07,73;UBERON:0002780,4.33e-07,39;UBERON:0001890,4.33e-07,39;UBERON:0006240,4.33e-07,39;UBERON:0010314,6.49e-07,92;UBERON:0003080,7.01e-07,40 | |||
|phase1_expression=13.7728008510123,1.39590163055744,1.36499771816861,1.20985684522732,2.50447864973174,1.84667199103079,2.10251376535973,0.387369970324729,2.111830832275,1.17032263160997,1.54096171402954,1.51567102091139,1.02720437958723,0.34968160967599,0.333109761815663,0.607425802169478,0.699561878128147,0.788655413395594,1.37114433605739,0,24.407424273357,1.39007331681239,0.522399578277871,1.11994695955385,1.60586496747019,0.57423196411502,0,1.50829862880122,2.09025761402011,1.51218077855958,1.33038306393183,1.27006134691926,1.23012957516914,0,1.1554064790051,0.664938581433969,0.612508068787107,0.837063261473815,0.7813353445238,0,0.588231488031014,0,0,1.25896817975577,1.21652317463417,2.56965453026354,0,4.36050312760893,1.75748946187577,2.91644848611425,4.4795654920116,1.43752564364972,2.18117387875057,0,2.01656279485478,5.40244815675489,4.29800159908135,3.6097046459421,23.6710259205729,13.7537654610729,20.2826049121977,2.03306719241479,0.889294796111139,0.449949858640699,0,1.4209602298922,1.19840044207362,3.45796474789399,13.894408049336,17.2807601064564,17.4569717921647,4.57041575046086,7.06779331045163,16.7812394924487,19.9358579717932,11.0306254393203,2.20231761998777,6.2566795661742,5.52983519722476,17.4089899803856,19.4868680873133,18.7528813400434,4.4669279840221,2.8138130501584,5.80633341551878,13.5529149317887,9.11178757114259,15.4711540034999,1.81742863999642,2.11600368298999,0.289864488701678,0,0.679971333707751,0,0,0.448026887097336,4.49422144421606,3.40860645156115,3.11743205523443,2.82671659608272,11.1266301623578,12.8326477414318,28.028576367731,35.5533351576666,1.73192832808971,2.78695852022608,3.53867111510348,6.05174562511018,1.29468941823586,2.3750742250372,9.36820764537134,5.78484408793068,5.30415643688935,5.87818298155228,5.76184664964954,3.64433114856059,2.47194967734374,1.15679485535929,3.5384422077995,9.22071044700232,2.65009822152472,5.81850303762267,0,6.44117753425404,7.12118803165747,0.766371165625774,0.11981512450592,0,1.27070227073065,4.19413790333504,9.15001205637253,18.3455354084782,10.081810571152,16.1100738118108,5.81806524766768,9.08551073179443,21.6917845001174,3.85661608891288,1.0108910337347,0.631325567659422,16.7855371421888,16.5529515192101,14.7650946440386,11.7549757911858,12.858898339601,11.5302348256365,12.7434345401231,3.62184719034622,17.0298714416945,20.0452444977888,18.8267702855425,14.6861140726475,8.89751197521913,9.4028084960985,8.0255033199098,20.1024609486678,0,1.02939162845886,0.568326998791185,8.07790512888457,5.8631514995274,7.38254451990161,5.91861838963026,7.47704080640135,7.55908853148153,6.51095045301142,6.9751084363901,5.48797109125697,5.9241545968853,2.79084688934462,2.67527071501324,1.60819986167866,2.19550115291051,2.14730270016595,5.46753866266731,16.9792610425819,0.660837565967596,0,15.9966187901425,13.7019636397659,9.40732467651281,5.24377164020691,5.78182913996663,3.04361001780095,1.42358718463353,2.30578536613615,2.76468729680296,4.57599885694647,3.70431765526328,3.59527763461689,1.29682829924817,1.59313018603494,13.6560888686219,14.738058126655,10.1436962105772,14.6628956048626,10.4734343070518,10.5905088034381,6.70307293517127,2.65698266363284,1.8839847340965,1.48076596706161,0,3.50374722003798,2.35870794135844,1.57403478669398,1.82574109249653,1.92941727801933,2.29163266603278,1.15078454980324,2.2698931748505,1.37280706594041,4.31304619582064,2.23284568601102,2.18426371180192,1.51547326768267,0.358794827043824,0.482443521363367,2.21703828199926,16.8647356475731,11.2445833744998,14.9375675482166,13.6120344007331,9.04533790185805,7.61739650835244,9.95181604074774,6.77831119656621,8.858587585951,9.24837658213425,4.58817281204066,3.7990696010497,4.77341893318988,4.52373851817817,1.08781136763742,2.45882136509518,2.75936746304733,4.97706828962155,5.04010252346474,5.90165803356032,2.27223834483936,4.41711507182759,3.90438744296638,9.26320610251035,7.88597033243422,8.46634961513098,11.0399847007645,8.90583543684768,9.05993159525067,7.11518000303742,3.53453448063988,3.83238230062325,15.313641915384,21.0124177566113,4.61916344323099,1.32745138339963,10.6823479908192,6.04647113929502,4.33791683438566,2.95301892880773,4.61152721915891,9.04499026088774,4.72593848320757,5.34746067577082,1.8962205476149,1.05418608574999,2.06271086496374,5.44703369206061,16.9257428389432,16.0404767890616,15.2179294872431,14.0098784577396,10.5237602385222,11.1893334009442,6.39376393140658,2.58138878870081,4.87213762986786,0.882113592219848,6.76033637060068,6.13564821444441,6.39317004238452,6.92359595218192,5.74493149107714,2.91480836629851,4.63563255026274,0.170870880797853,9.08102219038179,5.55583582109135,2.0720530270516,2.1871076435364,0.686334519619568,0.169978429993855,0.139951452323658,1.38199973804424,0.954670618015114,18.8219916180776,10.9792512248498,10.8005340821801,6.89991376847747,6.76923947613151,5.66430254816247,6.61227645802687,3.14107130380836,2.59229946583586,0,140.923234671048,12.5593898676942,10.9202603701684,11.8615224889869,16.1449779347164,14.1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| |phase1_expression=13.7728008510123,1.39590163055744,1.36499771816861,1.20985684522732,2.50447864973174,1.84667199103079,2.10251376535973,0.387369970324729,2.111830832275,1.17032263160997,1.54096171402954,1.51567102091139,1.02720437958723,0.34968160967599,0.333109761815663,0.607425802169478,0.699561878128147,0.788655413395594,1.37114433605739,0,24.407424273357,1.39007331681239,0.522399578277871,1.11994695955385,1.60586496747019,0.57423196411502,0,1.50829862880122,2.09025761402011,1.51218077855958,1.33038306393183,1.27006134691926,1.23012957516914,0,1.1554064790051,0.664938581433969,0.612508068787107,0.837063261473815,0.7813353445238,0,0.588231488031014,0,0,1.25896817975577,1.21652317463417,2.56965453026354,0,4.36050312760893,1.75748946187577,2.91644848611425,4.4795654920116,1.43752564364972,2.18117387875057,0,2.01656279485478,5.40244815675489,4.29800159908135,3.6097046459421,23.6710259205729,13.7537654610729,20.2826049121977,2.03306719241479,0.889294796111139,0.449949858640699,0,1.4209602298922,1.19840044207362,3.45796474789399,13.894408049336,17.2807601064564,17.4569717921647,4.57041575046086,7.06779331045163,16.7812394924487,19.9358579717932,11.0306254393203,2.20231761998777,6.2566795661742,5.52983519722476,17.4089899803856,19.4868680873133,18.7528813400434,4.4669279840221,2.8138130501584,5.80633341551878,13.5529149317887,9.11178757114259,15.4711540034999,1.81742863999642,2.11600368298999,0.289864488701678,0,0.679971333707751,0,0,0.448026887097336,4.49422144421606,3.40860645156115,3.11743205523443,2.82671659608272,11.1266301623578,12.8326477414318,28.028576367731,35.5533351576666,1.73192832808971,2.78695852022608,3.53867111510348,6.05174562511018,1.29468941823586,2.3750742250372,9.36820764537134,5.78484408793068,5.30415643688935,5.87818298155228,5.76184664964954,3.64433114856059,2.47194967734374,1.15679485535929,3.5384422077995,9.22071044700232,2.65009822152472,5.81850303762267,0,6.44117753425404,7.12118803165747,0.766371165625774,0.11981512450592,0,1.27070227073065,4.19413790333504,9.15001205637253,18.3455354084782,10.081810571152,16.1100738118108,5.81806524766768,9.08551073179443,21.6917845001174,3.85661608891288,1.0108910337347,0.631325567659422,16.7855371421888,16.5529515192101,14.7650946440386,11.7549757911858,12.858898339601,11.5302348256365,12.7434345401231,3.62184719034622,17.0298714416945,20.0452444977888,18.8267702855425,14.6861140726475,8.89751197521913,9.4028084960985,8.0255033199098,20.1024609486678,0,1.02939162845886,0.568326998791185,8.07790512888457,5.8631514995274,7.38254451990161,5.91861838963026,7.47704080640135,7.55908853148153,6.51095045301142,6.9751084363901,5.48797109125697,5.9241545968853,2.79084688934462,2.67527071501324,1.60819986167866,2.19550115291051,2.14730270016595,5.46753866266731,16.9792610425819,0.660837565967596,0,15.9966187901425,13.7019636397659,9.40732467651281,5.24377164020691,5.78182913996663,3.04361001780095,1.42358718463353,2.30578536613615,2.76468729680296,4.57599885694647,3.70431765526328,3.59527763461689,1.29682829924817,1.59313018603494,13.6560888686219,14.738058126655,10.1436962105772,14.6628956048626,10.4734343070518,10.5905088034381,6.70307293517127,2.65698266363284,1.8839847340965,1.48076596706161,0,3.50374722003798,2.35870794135844,1.57403478669398,1.82574109249653,1.92941727801933,2.29163266603278,1.15078454980324,2.2698931748505,1.37280706594041,4.31304619582064,2.23284568601102,2.18426371180192,1.51547326768267,0.358794827043824,0.482443521363367,2.21703828199926,16.8647356475731,11.2445833744998,14.9375675482166,13.6120344007331,9.04533790185805,7.61739650835244,9.95181604074774,6.77831119656621,8.858587585951,9.24837658213425,4.58817281204066,3.7990696010497,4.77341893318988,4.52373851817817,1.08781136763742,2.45882136509518,2.75936746304733,4.97706828962155,5.04010252346474,5.90165803356032,2.27223834483936,4.41711507182759,3.90438744296638,9.26320610251035,7.88597033243422,8.46634961513098,11.0399847007645,8.90583543684768,9.05993159525067,7.11518000303742,3.53453448063988,3.83238230062325,15.313641915384,21.0124177566113,4.61916344323099,1.32745138339963,10.6823479908192,6.04647113929502,4.33791683438566,2.95301892880773,4.61152721915891,9.04499026088774,4.72593848320757,5.34746067577082,1.8962205476149,1.05418608574999,2.06271086496374,5.44703369206061,16.9257428389432,16.0404767890616,15.2179294872431,14.0098784577396,10.5237602385222,11.1893334009442,6.39376393140658,2.58138878870081,4.87213762986786,0.882113592219848,6.76033637060068,6.13564821444441,6.39317004238452,6.92359595218192,5.74493149107714,2.91480836629851,4.63563255026274,0.170870880797853,9.08102219038179,5.55583582109135,2.0720530270516,2.1871076435364,0.686334519619568,0.169978429993855,0.139951452323658,1.38199973804424,0.954670618015114,18.8219916180776,10.9792512248498,10.8005340821801,6.89991376847747,6.76923947613151,5.66430254816247,6.61227645802687,3.14107130380836,2.59229946583586,0,140.923234671048,12.5593898676942,10.9202603701684,11.8615224889869,16.1449779347164,14.1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| ||
|short_description=p2@Ubtd2 | |short_description=p2@Ubtd2 | ||
}} | }} |
Latest revision as of 07:31, 27 September 2015
Short description: | p2@Ubtd2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Ubtd2_5end |
Coexpression cluster: | MCL_coexpression_mm9:0 |
Association with transcript: | -270bp_to_ENSMUST00000051053_5end |
EntrezGene: | Ubtd2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 9.36e-07 | 33 |
neuronal stem cell | 9.36e-07 | 33 |
neuroblast | 9.36e-07 | 33 |
electrically signaling cell | 9.36e-07 | 33 |
Ontology term | p-value | n |
---|---|---|
pre-chordal neural plate | 1.79e-08 | 49 |
ecto-epithelium | 3.05e-08 | 73 |
neurectoderm | 4.86e-08 | 64 |
neural plate | 4.86e-08 | 64 |
presumptive neural plate | 4.86e-08 | 64 |
embryo | 1.56e-07 | 320 |
ectoderm-derived structure | 3.12e-07 | 95 |
ectoderm | 3.12e-07 | 95 |
presumptive ectoderm | 3.12e-07 | 95 |
central nervous system | 3.56e-07 | 73 |
regional part of forebrain | 4.33e-07 | 39 |
forebrain | 4.33e-07 | 39 |
future forebrain | 4.33e-07 | 39 |
structure with developmental contribution from neural crest | 6.49e-07 | 92 |
anterior neural tube | 7.01e-07 | 40 |