FFCP PHASE1:Mm9::chr3:116414738..116414765,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=229782 | |EntrezGene=229782 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1324 | |||
|TSSclassifier=NA | |||
|UniProt=D3YXZ7 | |UniProt=D3YXZ7 | ||
|association_with_transcript=0bp_to_ENSMUST00000153108_5end | |association_with_transcript=0bp_to_ENSMUST00000153108_5end | ||
|cluster_id=chr3:116414738..116414765,- | |||
|description=CAGE_peak_6_at_Slc35a3_5end | |description=CAGE_peak_6_at_Slc35a3_5end | ||
|id=chr3:116414738..116414765,- | |id=chr3:116414738..116414765,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0002250,4.07e-08,3;CL:0000682,5.42e-08,3;CL:0002563,3.90e-07,9;CL:0002251,3.90e-07,9 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!9.13e-14!59;UBERON:0000344!1.40e-08!15;UBERON:0000160!1.76e-08!43;UBERON:0001242!4.94e-07!13;UBERON:0000060!4.94e-07!13;UBERON:0001262!4.94e-07!13;UBERON:0004786!4.94e-07!13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005409,1.63e-30,47;UBERON:0000160,2.69e-18,31;UBERON:0000344,1.12e-15,15;UBERON:0001007,9.40e-15,116;UBERON:0001555,9.40e-15,116;UBERON:0007026,9.40e-15,116;UBERON:0004119,2.14e-14,118;UBERON:0000925,2.14e-14,118;UBERON:0006595,2.14e-14,118;UBERON:0004921,1.47e-12,114;UBERON:0000945,1.78e-12,16;UBERON:0010039,1.78e-12,16;UBERON:0001242,1.22e-11,13;UBERON:0001262,1.22e-11,13;UBERON:0004786,1.22e-11,13;UBERON:0002108,2.51e-10,4;UBERON:0004923,4.50e-09,24;UBERON:0000331,3.23e-08,3;UBERON:0002116,3.23e-08,3;UBERON:0001204,3.23e-08,3;UBERON:0001168,3.23e-08,3;UBERON:0003350,3.90e-07,9;UBERON:0004808,3.90e-07,9;UBERON:0001277,3.90e-07,9 | |||
|phase1_expression=0,0.348975407639361,0.454999239389536,0,0,3.52546471014969,4.90586545250604,0,0,0,0,0,0,0,0,0,0,0.157731082679119,0,0,0.0850432901510698,0.0992909512008853,0,3.51983330145495,2.2940928106717,1.72269589234506,1.29228598847722,2.15471232685889,1.33016393619462,1.26015064879965,5.09980174507201,0,0,0,1.73310971850765,2.1610503896604,1.42918549383658,0,0,0,0,0,0,0,0.101376931219515,0,0,0,0,0.388859798148567,0,0,0,0,0,0,0,0.515672092277442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122490799214954,0,0,0,0.127687338085188,0,0,0.0914876436024097,0,0,0,0,0,0.142371680799103,0,0.151452386666368,0.151143120213571,0,0,0,0,0,0,0,0.170430322578058,0,0.35333957451034,0.14084341977668,0,0,0,0,0,0,0.5709193985953,0.258937883647172,0,0,0,0,0.150722640552623,0,0,0,0,0,0.323533699894818,0.220841518460394,0,5.59175283654366,0,0,2.29911349687732,0,0,0,0,0.457500602818626,0,0,0,0,0.162241263067758,0,0.124406970610093,0.252722758433675,0.841767423545896,0,0,0,0,0,0,0.0937017245597288,1.03481348295606,0,0,0.175951124163949,0.219195732427575,0.278047249225598,0.348252166522167,0.205782136407943,0,0,0,0,0,0,0,0.23674473558521,0.196764231747404,0,0,0,0,0,0.32833492815819,0.324275238183423,0.146199987425332,0.219550115291051,0,0,0,0.330418782983798,0.793351699990633,0,0,0.515469845288373,0.201683524623343,0.444756087689741,1.14135375667535,1.89811624617805,0.823494773620054,1.75934646160189,0.994782360205754,0.58489226135736,0,5.18731319699266,6.57166201739412,0.189667900953082,0.456994050438915,0,0.407302655690628,0,0.0701358198903186,0,0.147610147979602,0,0,0,0.166845105716094,0,0.224862112384854,0.202860121388503,0,0,0,0,0,0,0,0,0.252578877947112,0,0,0,0,0,0,0,0,0,0,0,0.221464689648775,0,0,0,0,0,0,0.491764273019036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162886959353576,0.329940245945071,0,0,0,0,0,0,0,0,0.356497378384721,0,0,0,0,0,0,0,0,0,0,0,0,0,16.5396298541221,0,0.161464426695906,0.0603129249281559,0,0.328281799490123,1.45740418314925,0,0,0.206386867963223,0,0,0.546776910884101,0.228778173206523,0,0,0,4.77335309007557,0,1.42323626988794,2.37611749807963,4.59994251231831,4.80397640241591,2.83215127408124,3.80205896336545,7.85267825952089,2.72191443912765,1.24267862617385,0,0,0,0,0,0,0,0,0.209718688851422,0,0,0,0,0,0,0.179026695667481,0,0,0,0,0,0,0.0974578807397524,0,0,1.13365191807606,0,0,0.167884616364078,0,0.187682475451182,0.73260649706906,0,1.00314420807073,0,0,0,0,0,0,0,0,0,0,0,0,0,0.972426868273176,0,0,0.222246727801615,0.412070114477788,0,0,0.25347929989024,0.754505365544305,0.280924522409647,0.128050304809739,0.287177344778066,0.476293691283074,0.347652977834566,0,0.412085900803307,0.294397840268795,0,0.177475806159338,0.238436189947321,0.436039249896986,0.0941093804153306,0.169229215783353,0.365855945745545,0,0.135804113845862,0,0.118635018124174,0.492522411877817,0.409231043169689,0.464810523557898,0.192906610981141,0.249810577937946,0.467863216890817,0.429742108096597,0.191288332068843,0,0.231867835620421 | |phase1_expression=0,0.348975407639361,0.454999239389536,0,0,3.52546471014969,4.90586545250604,0,0,0,0,0,0,0,0,0,0,0.157731082679119,0,0,0.0850432901510698,0.0992909512008853,0,3.51983330145495,2.2940928106717,1.72269589234506,1.29228598847722,2.15471232685889,1.33016393619462,1.26015064879965,5.09980174507201,0,0,0,1.73310971850765,2.1610503896604,1.42918549383658,0,0,0,0,0,0,0,0.101376931219515,0,0,0,0,0.388859798148567,0,0,0,0,0,0,0,0.515672092277442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122490799214954,0,0,0,0.127687338085188,0,0,0.0914876436024097,0,0,0,0,0,0.142371680799103,0,0.151452386666368,0.151143120213571,0,0,0,0,0,0,0,0.170430322578058,0,0.35333957451034,0.14084341977668,0,0,0,0,0,0,0.5709193985953,0.258937883647172,0,0,0,0,0.150722640552623,0,0,0,0,0,0.323533699894818,0.220841518460394,0,5.59175283654366,0,0,2.29911349687732,0,0,0,0,0.457500602818626,0,0,0,0,0.162241263067758,0,0.124406970610093,0.252722758433675,0.841767423545896,0,0,0,0,0,0,0.0937017245597288,1.03481348295606,0,0,0.175951124163949,0.219195732427575,0.278047249225598,0.348252166522167,0.205782136407943,0,0,0,0,0,0,0,0.23674473558521,0.196764231747404,0,0,0,0,0,0.32833492815819,0.324275238183423,0.146199987425332,0.219550115291051,0,0,0,0.330418782983798,0.793351699990633,0,0,0.515469845288373,0.201683524623343,0.444756087689741,1.14135375667535,1.89811624617805,0.823494773620054,1.75934646160189,0.994782360205754,0.58489226135736,0,5.18731319699266,6.57166201739412,0.189667900953082,0.456994050438915,0,0.407302655690628,0,0.0701358198903186,0,0.147610147979602,0,0,0,0.166845105716094,0,0.224862112384854,0.202860121388503,0,0,0,0,0,0,0,0,0.252578877947112,0,0,0,0,0,0,0,0,0,0,0,0.221464689648775,0,0,0,0,0,0,0.491764273019036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162886959353576,0.329940245945071,0,0,0,0,0,0,0,0,0.356497378384721,0,0,0,0,0,0,0,0,0,0,0,0,0,16.5396298541221,0,0.161464426695906,0.0603129249281559,0,0.328281799490123,1.45740418314925,0,0,0.206386867963223,0,0,0.546776910884101,0.228778173206523,0,0,0,4.77335309007557,0,1.42323626988794,2.37611749807963,4.59994251231831,4.80397640241591,2.83215127408124,3.80205896336545,7.85267825952089,2.72191443912765,1.24267862617385,0,0,0,0,0,0,0,0,0.209718688851422,0,0,0,0,0,0,0.179026695667481,0,0,0,0,0,0,0.0974578807397524,0,0,1.13365191807606,0,0,0.167884616364078,0,0.187682475451182,0.73260649706906,0,1.00314420807073,0,0,0,0,0,0,0,0,0,0,0,0,0,0.972426868273176,0,0,0.222246727801615,0.412070114477788,0,0,0.25347929989024,0.754505365544305,0.280924522409647,0.128050304809739,0.287177344778066,0.476293691283074,0.347652977834566,0,0.412085900803307,0.294397840268795,0,0.177475806159338,0.238436189947321,0.436039249896986,0.0941093804153306,0.169229215783353,0.365855945745545,0,0.135804113845862,0,0.118635018124174,0.492522411877817,0.409231043169689,0.464810523557898,0.192906610981141,0.249810577937946,0.467863216890817,0.429742108096597,0.191288332068843,0,0.231867835620421 | ||
|short_description=p6@Slc35a3 | |short_description=p6@Slc35a3 | ||
}} | }} |
Latest revision as of 12:07, 1 October 2015
Short description: | p6@Slc35a3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Slc35a3_5end |
Coexpression cluster: | MCL_coexpression_mm9:1324 |
Association with transcript: | 0bp_to_ENSMUST00000153108_5end |
EntrezGene: | Slc35a3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal crypt stem cell | 4.07e-08 | 3 |
M cell of gut | 5.42e-08 | 3 |
intestinal epithelial cell | 3.90e-07 | 9 |
epithelial cell of alimentary canal | 3.90e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system | 1.63e-30 | 47 |
intestine | 2.69e-18 | 31 |
mucosa | 1.12e-15 | 15 |
digestive system | 9.40e-15 | 116 |
digestive tract | 9.40e-15 | 116 |
primitive gut | 9.40e-15 | 116 |
endoderm-derived structure | 2.14e-14 | 118 |
endoderm | 2.14e-14 | 118 |
presumptive endoderm | 2.14e-14 | 118 |
subdivision of digestive tract | 1.47e-12 | 114 |
stomach | 1.78e-12 | 16 |
food storage organ | 1.78e-12 | 16 |
intestinal mucosa | 1.22e-11 | 13 |
wall of intestine | 1.22e-11 | 13 |
gastrointestinal system mucosa | 1.22e-11 | 13 |
small intestine | 2.51e-10 | 4 |
organ component layer | 4.50e-09 | 24 |
ileal mucosa | 3.23e-08 | 3 |
ileum | 3.23e-08 | 3 |
mucosa of small intestine | 3.23e-08 | 3 |
wall of small intestine | 3.23e-08 | 3 |
epithelium of mucosa | 3.90e-07 | 9 |
gastrointestinal system epithelium | 3.90e-07 | 9 |
intestinal epithelium | 3.90e-07 | 9 |