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FFCP PHASE1:Mm9::chr3:120966232..120966265,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=99887
|EntrezGene=99887
|HGNC=
|HGNC=
|MCL_coexpression_id=8
|MCL_coexpression_id=8
|TSSclassifier=NA
|UniProt=Q8CGF5
|UniProt=Q8CGF5
|association_with_transcript=0bp_to_ENSMUST00000029777,ENSMUST00000166238,NM_178936,uc008rdw.1_5end
|association_with_transcript=0bp_to_ENSMUST00000029777,ENSMUST00000166238,NM_178936,uc008rdw.1_5end
|cluster_id=chr3:120966232..120966265,-
|description=CAGE_peak_3_at_Tmem56_5end
|description=CAGE_peak_3_at_Tmem56_5end
|id=chr3:120966232..120966265,-
|id=chr3:120966232..120966265,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0005409!3.87e-16!59;UBERON:0009854!1.72e-13!23;UBERON:0009856!1.72e-13!23;UBERON:0002365!4.67e-13!25;UBERON:0002330!4.67e-13!25;UBERON:0002107!7.09e-13!22;UBERON:0007499!7.09e-13!22;UBERON:0006925!7.09e-13!22;UBERON:0009497!7.09e-13!22;UBERON:0000015!7.09e-13!22;UBERON:0002423!7.09e-13!22;UBERON:0006235!7.09e-13!22;UBERON:0008835!7.09e-13!22;UBERON:0003894!7.09e-13!22;UBERON:0004161!7.09e-13!22;UBERON:0008836!7.09e-13!22;UBERON:0000160!8.46e-13!43;UBERON:0005172!4.38e-11!49;UBERON:0005173!4.38e-11!49;UBERON:0002417!4.38e-11!49;UBERON:0000916!4.38e-11!49;UBERON:0001007!1.06e-09!128;UBERON:0001555!1.06e-09!128;UBERON:0007026!1.06e-09!128;UBERON:0004921!1.92e-09!126;UBERON:0004185!1.92e-09!126;UBERON:0004119!3.00e-09!130;UBERON:0000925!3.00e-09!130;UBERON:0006595!3.00e-09!130;UBERON:0004923!8.67e-08!24;UBERON:0005177!8.85e-08!85
|ontology_enrichment_uberon=UBERON:0005409!3.87e-16!59;UBERON:0009854!1.72e-13!23;UBERON:0009856!1.72e-13!23;UBERON:0002365!4.67e-13!25;UBERON:0002330!4.67e-13!25;UBERON:0002107!7.09e-13!22;UBERON:0007499!7.09e-13!22;UBERON:0006925!7.09e-13!22;UBERON:0009497!7.09e-13!22;UBERON:0000015!7.09e-13!22;UBERON:0002423!7.09e-13!22;UBERON:0006235!7.09e-13!22;UBERON:0008835!7.09e-13!22;UBERON:0003894!7.09e-13!22;UBERON:0004161!7.09e-13!22;UBERON:0008836!7.09e-13!22;UBERON:0000160!8.46e-13!43;UBERON:0005172!4.38e-11!49;UBERON:0005173!4.38e-11!49;UBERON:0002417!4.38e-11!49;UBERON:0000916!4.38e-11!49;UBERON:0001007!1.06e-09!128;UBERON:0001555!1.06e-09!128;UBERON:0007026!1.06e-09!128;UBERON:0004921!1.92e-09!126;UBERON:0004185!1.92e-09!126;UBERON:0004119!3.00e-09!130;UBERON:0000925!3.00e-09!130;UBERON:0006595!3.00e-09!130;UBERON:0004923!8.67e-08!24;UBERON:0005177!8.85e-08!85
|ontology_enrichment_uberon_v019_2=UBERON:0009854,5.71e-16,23;UBERON:0009856,5.71e-16,23;UBERON:0002365,1.88e-15,25;UBERON:0002330,1.88e-15,25;UBERON:0002107,3.27e-15,22;UBERON:0007499,3.27e-15,22;UBERON:0006925,3.27e-15,22;UBERON:0009497,3.27e-15,22;UBERON:0000015,3.27e-15,22;UBERON:0002423,3.27e-15,22;UBERON:0006235,3.27e-15,22;UBERON:0008835,3.27e-15,22;UBERON:0003894,3.27e-15,22;UBERON:0004161,3.27e-15,22;UBERON:0008836,3.27e-15,22;UBERON:0005409,3.67e-13,47;UBERON:0000160,1.07e-10,31;UBERON:0005172,1.15e-10,49;UBERON:0005173,1.15e-10,49;UBERON:0002417,1.15e-10,49;UBERON:0000916,1.15e-10,49;UBERON:0001007,4.24e-09,116;UBERON:0001555,4.24e-09,116;UBERON:0007026,4.24e-09,116;UBERON:0004921,4.25e-09,114;UBERON:0004923,1.04e-08,24;UBERON:0004119,1.36e-08,118;UBERON:0000925,1.36e-08,118;UBERON:0006595,1.36e-08,118;UBERON:0005177,1.80e-07,79;UBERON:0002075,2.21e-07,19;UBERON:0001242,4.20e-07,13;UBERON:0001262,4.20e-07,13;UBERON:0004786,4.20e-07,13
|phase1_expression=0.160148847104794,6.2815573375085,2.72999543633722,8.46899791659124,7.51343594919521,4.19698179779725,2.33612640595526,0,0.140788722151667,0,0,0,0,0,12.9912807108108,8.09901069559304,16.0899231969474,0.473193248037357,0.137114433605739,0.84877930359606,1.19060606211498,0.0992909512008853,0,0.799962113967033,2.98232065387321,4.59385571292016,0.86152399231815,4.09395342103189,4.94060890586572,5.04060259519861,4.6563407237614,3.81018404075779,3.07532393792285,0,4.62162591602039,3.15845826181135,4.08338712524738,0,0.7813353445238,0,0,0,0.485510353031154,0,0.101376931219515,0.183546752161682,0,0,0,0,0.139986421625363,0,0,0,0,0,0,0,0,0.528990979272033,0,0,0,0,0,0,0,0,0.207379224616955,0.405017814995072,0,0.571301968807607,0.441737081903227,0.367472397644862,0.191690942036473,0,0,1.40456071893706,2.15049146558741,0.659431438650969,0.548925861614458,1.56274011167028,1.11673199600552,0,0.30559649555362,0.589257170947335,2.13557521198654,0.931997229126503,0,0,0.289864488701678,17.2084775396277,8.15965600449301,38.8586297979228,58.4798775702902,63.1717910807243,11.6568868709354,0,0,0,0.422530259330042,0,0,0,0.216491041011214,0,0,28.545969929765,0,2.22663208597237,0.173485326766136,0.304465478312141,0.691846491768175,0.904335843315735,1.05829836422134,0.628332956648377,3.21353458054686,2.16899035379867,2.65383165584962,1.45590164952668,4.41683036920787,5.33362778448744,11.1835056730873,6.14839673724249,3.97948742945565,5.8755122697976,0,0,0,0.599162557619291,0.915001205637253,0.753926112677186,4.34560800480691,3.3243009452943,1.87009240103604,1.62241263067758,0.101839363850316,3.23458123586242,0.252722758433675,7.99679052368601,0,0,0,0.452114453507145,0,0.2562274405697,0,3.10444044886819,0,0.189106080167819,0,0,0,1.74126083261083,1.4404749548556,0,0,0,0,0,0.938104239924385,0,0,0.196764231747404,0,0,0,0,0,0,0,0,0,0,1.68231958851302,2.05809224758569,7.26921322564356,7.1401652999157,0,0.464473343720877,0.515469845288373,1.21010114774006,2.89091456998331,3.42406127002606,8.0669940462567,8.56434564564857,6.53471542880701,5.96869416123452,7.01870713628832,0.898819408654221,4.10662294761919,4.58024928485045,0,0.685491075658373,1.1270773567308,0.203651327845314,0.387904974335251,0.140271639780637,1.01178459398812,1.91893192373483,1.255989822731,1.97435462274881,39.1317467755037,5.6727335943472,4.32429789249047,5.62155280962134,5.88294352026658,4.82354319504834,4.32863948028414,10.0693648107784,17.1863340381537,21.9649130550465,57.5072826109418,24.9334434937897,29.6435789458833,30.8146231095476,31.2151499528127,39.5603687517961,0.739012760666419,0.189491411770485,0.162964976442026,0,0,0,0.238043640886014,0,0.157635144106191,0.44292937929755,0.159454768657487,0.163863314715738,0.345369963731791,0.433947175744535,0,0,1.47529281905711,4.41498794087572,0.481651769963376,0.703270119553219,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0.321321316421807,0.851640511249612,0.534196811001766,0,0.164970122972535,7.96470830039777,0,0.302323556964751,5.65815239267694,3.83892460745005,7.68587869859819,5.68542244970086,3.27180356529755,2.49548164869305,6.95280867458795,9.48767477174989,8.25084345985495,3.06395645178409,0,0,0.214337035031592,0.354680467284547,0.535106452806212,0.329098041204242,0.608929898229199,0,0.42366414172764,1.7642271844397,3.95727007059552,0.484393280087717,3.43783672090488,3.9392873521035,5.25250879184196,5.53813589596716,0.370850604021019,8.20180227829693,1.65109494370578,7.22258656741876,15.6345819313894,14.4895881384287,8.92234875505438,0,0.139951452323658,0,0.954670618015114,0.158167996790568,1.01659733563424,0.540026704109006,0.418176592028937,1.74690050996942,2.69728692769641,4.95920734352016,2.09404753587224,5.96228877142247,1.24267862617385,0,0,0.165458490457098,0,0.129159823477731,0.337912250981556,0.117357238645754,0.5208175393758,0.838874755405687,0,0.864090018773596,0,0,0,0,0,0,0,0,0.100966449948148,0,0.100826185136841,0.194915761479505,0,0,0.453460767230423,0,0,0,0,0.375364950902364,0.73260649706906,5.57357785605571,1.00314420807073,1.12950368523413,2.76195141904306,4.58316410751517,2.749650917499,1.37016503954128,4.5323633843382,4.72515750162264,1.80128481289688,4.53142408984205,2.5888015587591,0,0.399024873401031,0.512200817262403,1.21553358534147,0.419226325255965,0.919217542250071,0.888986911206461,2.06035057238894,0.64183841918363,0.505394423527595,2.28131369901216,2.45214243801899,1.21733959710847,1.6646539625266,1.20614484806788,1.42888107384922,1.0429589335037,0.964546102318525,1.23625770240992,0.588795680537589,0.685738504770831,0.532427418478012,1.1921809497366,1.45346416632329,1.31753132581463,1.69229215783353,1.82927972872773,0.789209134313529,0.950628796921032,2.24456908663095,0.830445126869219,1.0835493061312,0.818462086339379,0.929621047115796,1.54325288784913,1.49886346762768,0.467863216890817,2.14871054048298,0.956441660344217,1.10295709559758,1.39120701372253
|phase1_expression=0.160148847104794,6.2815573375085,2.72999543633722,8.46899791659124,7.51343594919521,4.19698179779725,2.33612640595526,0,0.140788722151667,0,0,0,0,0,12.9912807108108,8.09901069559304,16.0899231969474,0.473193248037357,0.137114433605739,0.84877930359606,1.19060606211498,0.0992909512008853,0,0.799962113967033,2.98232065387321,4.59385571292016,0.86152399231815,4.09395342103189,4.94060890586572,5.04060259519861,4.6563407237614,3.81018404075779,3.07532393792285,0,4.62162591602039,3.15845826181135,4.08338712524738,0,0.7813353445238,0,0,0,0.485510353031154,0,0.101376931219515,0.183546752161682,0,0,0,0,0.139986421625363,0,0,0,0,0,0,0,0,0.528990979272033,0,0,0,0,0,0,0,0,0.207379224616955,0.405017814995072,0,0.571301968807607,0.441737081903227,0.367472397644862,0.191690942036473,0,0,1.40456071893706,2.15049146558741,0.659431438650969,0.548925861614458,1.56274011167028,1.11673199600552,0,0.30559649555362,0.589257170947335,2.13557521198654,0.931997229126503,0,0,0.289864488701678,17.2084775396277,8.15965600449301,38.8586297979228,58.4798775702902,63.1717910807243,11.6568868709354,0,0,0,0.422530259330042,0,0,0,0.216491041011214,0,0,28.545969929765,0,2.22663208597237,0.173485326766136,0.304465478312141,0.691846491768175,0.904335843315735,1.05829836422134,0.628332956648377,3.21353458054686,2.16899035379867,2.65383165584962,1.45590164952668,4.41683036920787,5.33362778448744,11.1835056730873,6.14839673724249,3.97948742945565,5.8755122697976,0,0,0,0.599162557619291,0.915001205637253,0.753926112677186,4.34560800480691,3.3243009452943,1.87009240103604,1.62241263067758,0.101839363850316,3.23458123586242,0.252722758433675,7.99679052368601,0,0,0,0.452114453507145,0,0.2562274405697,0,3.10444044886819,0,0.189106080167819,0,0,0,1.74126083261083,1.4404749548556,0,0,0,0,0,0.938104239924385,0,0,0.196764231747404,0,0,0,0,0,0,0,0,0,0,1.68231958851302,2.05809224758569,7.26921322564356,7.1401652999157,0,0.464473343720877,0.515469845288373,1.21010114774006,2.89091456998331,3.42406127002606,8.0669940462567,8.56434564564857,6.53471542880701,5.96869416123452,7.01870713628832,0.898819408654221,4.10662294761919,4.58024928485045,0,0.685491075658373,1.1270773567308,0.203651327845314,0.387904974335251,0.140271639780637,1.01178459398812,1.91893192373483,1.255989822731,1.97435462274881,39.1317467755037,5.6727335943472,4.32429789249047,5.62155280962134,5.88294352026658,4.82354319504834,4.32863948028414,10.0693648107784,17.1863340381537,21.9649130550465,57.5072826109418,24.9334434937897,29.6435789458833,30.8146231095476,31.2151499528127,39.5603687517961,0.739012760666419,0.189491411770485,0.162964976442026,0,0,0,0.238043640886014,0,0.157635144106191,0.44292937929755,0.159454768657487,0.163863314715738,0.345369963731791,0.433947175744535,0,0,1.47529281905711,4.41498794087572,0.481651769963376,0.703270119553219,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0.321321316421807,0.851640511249612,0.534196811001766,0,0.164970122972535,7.96470830039777,0,0.302323556964751,5.65815239267694,3.83892460745005,7.68587869859819,5.68542244970086,3.27180356529755,2.49548164869305,6.95280867458795,9.48767477174989,8.25084345985495,3.06395645178409,0,0,0.214337035031592,0.354680467284547,0.535106452806212,0.329098041204242,0.608929898229199,0,0.42366414172764,1.7642271844397,3.95727007059552,0.484393280087717,3.43783672090488,3.9392873521035,5.25250879184196,5.53813589596716,0.370850604021019,8.20180227829693,1.65109494370578,7.22258656741876,15.6345819313894,14.4895881384287,8.92234875505438,0,0.139951452323658,0,0.954670618015114,0.158167996790568,1.01659733563424,0.540026704109006,0.418176592028937,1.74690050996942,2.69728692769641,4.95920734352016,2.09404753587224,5.96228877142247,1.24267862617385,0,0,0.165458490457098,0,0.129159823477731,0.337912250981556,0.117357238645754,0.5208175393758,0.838874755405687,0,0.864090018773596,0,0,0,0,0,0,0,0,0.100966449948148,0,0.100826185136841,0.194915761479505,0,0,0.453460767230423,0,0,0,0,0.375364950902364,0.73260649706906,5.57357785605571,1.00314420807073,1.12950368523413,2.76195141904306,4.58316410751517,2.749650917499,1.37016503954128,4.5323633843382,4.72515750162264,1.80128481289688,4.53142408984205,2.5888015587591,0,0.399024873401031,0.512200817262403,1.21553358534147,0.419226325255965,0.919217542250071,0.888986911206461,2.06035057238894,0.64183841918363,0.505394423527595,2.28131369901216,2.45214243801899,1.21733959710847,1.6646539625266,1.20614484806788,1.42888107384922,1.0429589335037,0.964546102318525,1.23625770240992,0.588795680537589,0.685738504770831,0.532427418478012,1.1921809497366,1.45346416632329,1.31753132581463,1.69229215783353,1.82927972872773,0.789209134313529,0.950628796921032,2.24456908663095,0.830445126869219,1.0835493061312,0.818462086339379,0.929621047115796,1.54325288784913,1.49886346762768,0.467863216890817,2.14871054048298,0.956441660344217,1.10295709559758,1.39120701372253
|short_description=p3@Tmem56
|short_description=p3@Tmem56
}}
}}

Latest revision as of 12:48, 1 October 2015

Short description:p3@Tmem56
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Tmem56_5end
Coexpression cluster:MCL_coexpression_mm9:8
Association with transcript: 0bp_to_ENSMUST00000029777, ENSMUST00000166238, NM_178936, uc008rdw.1_5end
EntrezGene:Tmem56
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Tmem56

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.16
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I56.28
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I62.73
CD326+ enterocyte, pool1.CNhs13542.11848-124I38.47
CD326+ enterocyte, pool2.CNhs13197.11849-124I47.51
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I74.20
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I82.34
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.14
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A112.99
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A38.10
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A516.09
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.47
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.14
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.85
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.19
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.10
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.80
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D22.98
GP2+ M cell, pool1.CNhs13228.11845-124H94.59
GP2+ M cell, pool2.CNhs13231.11846-124I10.86
GP2+ M cell, pool3.CNhs13240.11847-124I24.09
Ileum epithelium, pool1.CNhs13199.10252-104B94.94
Ileum epithelium, pool2.CNhs13232.10253-104C15.04
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C84.66
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I33.81
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G63.08
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F54.62
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F63.16
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F74.08
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.78
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.49
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.10
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.18
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.53
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.21
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.41
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.44
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.37
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.19
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F31.40
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D72.15
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.66
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.55
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.56
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.12
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.31
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.59
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F62.14
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.93
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.29
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F717.21
Mouse hepatocyte, donor1.CNhs13078.11714-123C48.16
Mouse hepatocyte, donor3.CNhs12615.11637-122C838.86
Mouse hepatocyte, donor6.CNhs13090.11822-124F458.48
Mouse hepatocyte, donor8.CNhs13091.11824-124F663.17
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A711.66
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.42
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B628.55
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D72.23
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.69
adrenal gland, embryo E18.CNhs11026.1262-18F50.90
adrenal gland, neonate N00.CNhs11191.1311-23C11.06
adrenal gland, neonate N25.CNhs11223.1377-27I30.63
amnion, adult pregnant day17.5.CNhs10488.583-22A83.21
aorta, adult.CNhs10498.46-23H12.17
bone (os femoris), adult.CNhs10483.56-12G22.65
bone (os femoris), neonate N02.CNhs11227.1985-43F51.46
bone (os femoris), neonate N16.CNhs11225.1525-43A64.42
bone (os femoris), neonate N20.CNhs11195.1350-25C35.33
cecum, adult.CNhs10467.37-13H411.18
cerebellum, adult.CNhs10494.15-8B26.15
cerebellum, neonate N30.CNhs11135.1395-42I23.98
colon, adult.CNhs10468.36-18H75.88
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A40.60
corpus striatum, adult.CNhs10487.19-21D80.92
corpus striatum, neonate N00.CNhs11226.630-43F10.75
cortex, adult.CNhs10473.12-14D54.35
cortex, neonate N30.CNhs11107.1392-42F23.32
diencephalon, adult.CNhs10482.20-12F21.87
diencephalon, neonate N30.CNhs11201.1388-42B21.62
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.10
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A23.23
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G48.00
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.45
eyeball, neonate N00.CNhs11207.633-15C60.00
eyeball, neonate N01.CNhs11140.1532-43E70.26
eyeball, neonate N02.CNhs11205.1551-44G80.00
eyeball, neonate N16.CNhs11188.777-19A23.10
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C41.74
forelimb, embryo E18.CNhs11008.1520-43B51.44
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.94
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E81.68
hippocampus, neonate N00.CNhs11228.627-43G12.06
intestinal mucosa, adult.CNhs10506.860-29I37.27
intestine, adult.CNhs10496.178-9A37.14
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.46
intestine, embryo E15.CNhs10602.976-16D80.52
intestine, embryo E16.CNhs10585.463-22H41.21
intestine, embryo E17.CNhs10582.482-18D32.89
intestine, embryo E18.CNhs10526.1289-20F73.42
intestine, neonate N00.CNhs11126.644-26D18.07
intestine, neonate N01.CNhs11192.1322-23E98.56
intestine, neonate N06.CNhs11102.688-20B86.53
intestine, neonate N07.CNhs11095.720-20F25.97
intestine, neonate N10.CNhs11098.755-23A57.02
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E34.11
intestine, neonate N30.CNhs11131.1384-42G14.58
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.69
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.39
kidney, neonate N00.CNhs11214.646-21G70.14
kidney, neonate N10.CNhs11206.758-6D51.01
kidney, neonate N20.CNhs11113.832-19I11.92
kidney, neonate N25.CNhs11122.1353-25F31.26
kidney, neonate N30.CNhs11203.1385-42H11.97
liver, adult pregnant day01.CNhs10466.508-5B239.13
liver, embryo E12.CNhs10601.355-15F85.67
liver, embryo E13.CNhs10524.378-3H64.32
liver, embryo E14.CNhs10594.409-16E15.62
liver, embryo E15.CNhs10520.433-16D75.88
liver, embryo E16.CNhs10523.462-17F54.82
liver, embryo E17.CNhs10510.481-18A34.33
liver, embryo E18.CNhs10579.499-43G410.07
liver, neonate N00.CNhs11117.641-24F417.19
liver, neonate N03.CNhs11123.1345-25G221.96
liver, neonate N06.CNhs11101.684-20A857.51
liver, neonate N07.CNhs11103.716-20H224.93
liver, neonate N10.CNhs11115.751-24B929.64
liver, neonate N20.CNhs11220.823-25A330.81
liver, neonate N25.CNhs11198.1368-26H131.22
liver, neonate N30.CNhs11106.1382-42D139.56
lung, adult.CNhs10474.28-22B10.74
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.16
lung, neonate N07.CNhs11111.715-19A30.44
lung, neonate N10.CNhs11219.750-23E60.16
lung, neonate N20.CNhs11109.822-18A40.16
lung, neonate N25.CNhs11119.1359-25C70.35
lung, neonate N30.CNhs11133.1394-42H20.43
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B61.48
mammary gland, adult pregnant day19.CNhs10476.588-5H24.41
medulla oblongata, adult.CNhs10477.17-12C20.48
medulla oblongata, neonate N30.CNhs11200.1396-42A30.70
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.32
ovary, adult.CNhs10507.91-2I70.85
ovary, embryo E18.CNhs11040.505-44H70.53
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.16
pancreas, adult.CNhs10486.34-16E47.96
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E55.66
pancreas, embryo E17.CNhs10599.1558-45G33.84
pancreas, embryo E18.CNhs10580.1535-43I77.69
pancreas, neonate N00.CNhs11105.645-26G95.69
pancreas, neonate N01.CNhs11138.1531-43D73.27
pancreas, neonate N02.CNhs11139.1539-43D82.50
pancreas, neonate N16.CNhs11136.787-43B66.95
pancreas, neonate N25.CNhs11094.1555-45E29.49
pancreas, neonate N30.CNhs11182.1548-44H58.25
pituitary gland, adult.CNhs10493.21-1G83.06
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.21
pituitary gland, embryo E15.CNhs10592.427-16B90.35
pituitary gland, embryo E16.CNhs11036.449-43F60.54
pituitary gland, embryo E17.CNhs11039.1265-44F50.33
pituitary gland, neonate N00.CNhs11190.1308-22E90.61
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.42
prostate, adult.CNhs10470.859-1F81.76
skin, adult.CNhs10492.30-1C33.96
skin, neonate N00.CNhs11124.650-25G40.48
skin, neonate N03.CNhs11215.662-22H33.44
skin, neonate N06.CNhs11097.693-20I53.94
skin, neonate N10.CNhs11108.762-6C45.25
small intestine, neonate N16.CNhs11114.790-21I15.54
spinal cord, adult.CNhs10505.24-13C90.37
spleen, adult.CNhs10465.25-2G28.20
spleen, embryo E16.CNhs11035.461-43C11.65
spleen, embryo E18.CNhs11011.1271-21F27.22
spleen, neonate N10.CNhs11116.752-24D115.63
spleen, neonate N20.CNhs11112.824-19H114.49
spleen, neonate N25.CNhs11099.1354-25G38.92
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.14
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G81.02
stomach, embryo E16.CNhs11022.459-17D40.54
stomach, embryo E17.CNhs11006.1035-18D50.42
stomach, embryo E18.CNhs10999.1286-20C61.75
stomach, neonate N03.CNhs11193.1340-24B82.70
stomach, neonate N07.CNhs11210.718-18A94.96
stomach, neonate N25.CNhs11104.1355-25E42.09
stomach, neonate N30.CNhs11134.1386-42I15.96
submandibular gland, adult.CNhs10469.59-29C11.24
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.13
testis, embryo E18.CNhs11027.503-18G50.34
testis, neonate N00.CNhs11189.1300-22B70.12
testis, neonate N07.CNhs11222.726-26I40.52
testis, neonate N10.CNhs11204.763-44D90.84
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.86
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.10
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.10
thymus, neonate N20.CNhs11186.820-7A20.19
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.45
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.38
uterus, adult.CNhs10509.92-27E50.73
vagina, adult.CNhs10502.89-27D55.57
vesicular gland, adult.CNhs10491.51-27F81.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11.13
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A22.76
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A34.58
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D72.75
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A41.37
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A54.53
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A64.73
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A71.80
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A84.53
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A92.59
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H20.51
whole body, embryo E14.5.CNhs10578.420-27D21.22
whole body, embryo E14.CNhs10519.395-14B10.42
whole body, embryo E16.CNhs10514.453-14F20.92
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G52.28
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G52.45
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.22
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.66
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.21
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.04
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.19
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.45
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.69
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.83
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.79
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G52.24
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.83
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.08
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.93
whole body, embryo E17.5.CNhs10513.490-9F91.54
whole body, embryo E17.CNhs10517.475-3I51.50
whole body, embryo E18.CNhs10516.493-3B30.47
whole body, neonate N00.CNhs10525.657-19C22.15
whole body, neonate N01.CNhs10576.659-23C60.96
whole body, neonate N06.CNhs10515.692-21D11.10
whole body, neonate N10.CNhs10518.761-6B41.39





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
digestive tract diverticulum5.71e-1623
sac5.71e-1623
exocrine gland1.88e-1525
exocrine system1.88e-1525
liver3.27e-1522
epithelial sac3.27e-1522
digestive gland3.27e-1522
epithelium of foregut-midgut junction3.27e-1522
anatomical boundary3.27e-1522
hepatobiliary system3.27e-1522
foregut-midgut junction3.27e-1522
hepatic diverticulum3.27e-1522
liver primordium3.27e-1522
septum transversum3.27e-1522
liver bud3.27e-1522
gastrointestinal system3.67e-1347
intestine1.07e-1031
abdomen element1.15e-1049
abdominal segment element1.15e-1049
abdominal segment of trunk1.15e-1049
abdomen1.15e-1049
digestive system4.24e-09116
digestive tract4.24e-09116
primitive gut4.24e-09116
subdivision of digestive tract4.25e-09114
organ component layer1.04e-0824
endoderm-derived structure1.36e-08118
endoderm1.36e-08118
presumptive endoderm1.36e-08118
trunk region element1.80e-0779
viscus2.21e-0719
intestinal mucosa4.20e-0713
wall of intestine4.20e-0713
gastrointestinal system mucosa4.20e-0713
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