FFCP PHASE1:Mm9::chr18:62483479..62483498,+: Difference between revisions
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m (moved FFCP PHASE1 mm9::chr18:62483479..62483498,+ to FFCP PHASE1:Mm9::chr18:62483479..62483498,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=15562 | |EntrezGene=15562 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1221 | |||
|TSSclassifier=NA | |||
|UniProt=P97288 | |UniProt=P97288 | ||
|association_with_transcript=-359bp_to_ENSMUST00000027560,NM_008313,uc008fda.1_5end | |||
|cluster_id=chr18:62483479..62483498,+ | |||
|description=CAGE_peak_2_at_Htr4_5end | |||
|id=chr18:62483479..62483498,+ | |||
|ontology_enrichment_celltype=CL:0002563!4.42e-09!9;CL:0002251!4.42e-09!9;CL:0002250!3.43e-08!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002250,8.04e-22,3;CL:0002563,2.64e-19,9;CL:0002251,2.64e-19,9;CL:0002076,1.36e-11,15;CL:0000223,1.11e-08,20;CL:0000066,6.31e-07,25 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!3.57e-20!43;UBERON:0000344!8.11e-17!15;UBERON:0005409!9.51e-15!59;UBERON:0001242!2.43e-13!13;UBERON:0000060!2.43e-13!13;UBERON:0001262!2.43e-13!13;UBERON:0004786!2.43e-13!13;UBERON:0004923!1.56e-09!24;UBERON:0003350!4.42e-09!9;UBERON:0004808!4.42e-09!9;UBERON:0001277!4.42e-09!9;UBERON:0000331!1.17e-07!3;UBERON:0002116!1.17e-07!3;UBERON:0001204!1.17e-07!3;UBERON:0001168!1.17e-07!3;UBERON:0000485!2.88e-07!11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001242,1.14e-32,13;UBERON:0001262,1.14e-32,13;UBERON:0004786,1.14e-32,13;UBERON:0000160,2.32e-30,31;UBERON:0000344,3.00e-28,15;UBERON:0002108,3.13e-26,4;UBERON:0005409,2.65e-23,47;UBERON:0000331,3.41e-20,3;UBERON:0002116,3.41e-20,3;UBERON:0001204,3.41e-20,3;UBERON:0001168,3.41e-20,3;UBERON:0003350,2.64e-19,9;UBERON:0004808,2.64e-19,9;UBERON:0001277,2.64e-19,9;UBERON:0004923,1.92e-17,24;UBERON:0000485,8.35e-16,11;UBERON:0004921,6.50e-09,114;UBERON:0001007,9.76e-09,116;UBERON:0001555,9.76e-09,116;UBERON:0007026,9.76e-09,116;UBERON:0004119,1.45e-08,118;UBERON:0000925,1.45e-08,118;UBERON:0006595,1.45e-08,118;UBERON:0001153,1.56e-08,1;UBERON:0001045,1.56e-08,1 | |||
|phase1_expression=0,0,0.454999239389536,0,0,2.51818907867835,2.33612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.47997726838022,0.91763712426868,0,0.430761996159075,0.430942465371778,1.33016393619462,1.51218077855958,1.77384408524244,0,0,0,5.48818077527422,3.98963148860382,3.87921776898501,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0.153606533256243,0,0,0,0.558365998002762,0.56276261003168,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.0474232852686,0,0,0.766371165625774,0,0,0,0.449371918214468,0,0,0,0,0.20778804455956,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213288250535234,0.232236671860439,0.128867461322093,0,0,0,0.474529061544512,0.164698954724011,0.502670417600539,0,0.58489226135736,1.79763881730844,2.59365659849633,0.995706366271836,0,0,0,0,0,0.0701358198903186,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144649058581512,0,0,0,0,0.160550589987792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1659233465194,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.11075935900303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.579568782096571,0,0,0,0,0,0,0,0,0,0,0,0,0,0.51776031175182,0,0,0,0.243106717068294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147198920134397,0,0,0,0,0.0941093804153306,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0.454999239389536,0,0,2.51818907867835,2.33612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.47997726838022,0.91763712426868,0,0.430761996159075,0.430942465371778,1.33016393619462,1.51218077855958,1.77384408524244,0,0,0,5.48818077527422,3.98963148860382,3.87921776898501,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0.153606533256243,0,0,0,0.558365998002762,0.56276261003168,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.0474232852686,0,0,0.766371165625774,0,0,0,0.449371918214468,0,0,0,0,0.20778804455956,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213288250535234,0.232236671860439,0.128867461322093,0,0,0,0.474529061544512,0.164698954724011,0.502670417600539,0,0.58489226135736,1.79763881730844,2.59365659849633,0.995706366271836,0,0,0,0,0,0.0701358198903186,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144649058581512,0,0,0,0,0.160550589987792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1659233465194,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.11075935900303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.579568782096571,0,0,0,0,0,0,0,0,0,0,0,0,0,0.51776031175182,0,0,0,0.243106717068294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147198920134397,0,0,0,0,0.0941093804153306,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p2@Htr4 | |||
}} | }} |
Latest revision as of 14:33, 1 October 2015
Short description: | p2@Htr4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Htr4_5end |
Coexpression cluster: | MCL_coexpression_mm9:1221 |
Association with transcript: | -359bp_to_ENSMUST00000027560, NM_008313, uc008fda.1_5end |
EntrezGene: | Htr4 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal crypt stem cell | 8.04e-22 | 3 |
intestinal epithelial cell | 2.64e-19 | 9 |
epithelial cell of alimentary canal | 2.64e-19 | 9 |
endo-epithelial cell | 1.36e-11 | 15 |
endodermal cell | 1.11e-08 | 20 |
epithelial cell | 6.31e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
intestinal mucosa | 1.14e-32 | 13 |
wall of intestine | 1.14e-32 | 13 |
gastrointestinal system mucosa | 1.14e-32 | 13 |
intestine | 2.32e-30 | 31 |
mucosa | 3.00e-28 | 15 |
small intestine | 3.13e-26 | 4 |
gastrointestinal system | 2.65e-23 | 47 |
ileal mucosa | 3.41e-20 | 3 |
ileum | 3.41e-20 | 3 |
mucosa of small intestine | 3.41e-20 | 3 |
wall of small intestine | 3.41e-20 | 3 |
epithelium of mucosa | 2.64e-19 | 9 |
gastrointestinal system epithelium | 2.64e-19 | 9 |
intestinal epithelium | 2.64e-19 | 9 |
organ component layer | 1.92e-17 | 24 |
simple columnar epithelium | 8.35e-16 | 11 |
subdivision of digestive tract | 6.50e-09 | 114 |
digestive system | 9.76e-09 | 116 |
digestive tract | 9.76e-09 | 116 |
primitive gut | 9.76e-09 | 116 |
endoderm-derived structure | 1.45e-08 | 118 |
endoderm | 1.45e-08 | 118 |
presumptive endoderm | 1.45e-08 | 118 |
caecum | 1.56e-08 | 1 |
midgut | 1.56e-08 | 1 |