FFCP PHASE1:Mm9::chr5:114724042..114724090,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr5:114724042..114724090,- to FFCP PHASE1:Mm9::chr5:114724042..114724090,-: NSchange) |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=116810 | |EntrezGene=116810 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=133 | |||
|TSSclassifier=NA | |||
|UniProt=Q8K3Q3 | |UniProt=Q8K3Q3 | ||
|association_with_transcript=-226bp_to_ENSMUST00000044790_5end | |||
|cluster_id=chr5:114724042..114724090,- | |||
|description=CAGE_peak_2_at_Foxn4_5end | |||
|id=chr5:114724042..114724090,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000970!5.37e-11!9;UBERON:0000019!5.37e-11!9;UBERON:0000047!5.37e-11!9;UBERON:0004088!5.37e-11!9;UBERON:0002104!5.37e-11!9;UBERON:0001456!5.37e-11!9;UBERON:0003072!5.37e-11!9;UBERON:0003071!5.37e-11!9;UBERON:0004128!5.37e-11!9;UBERON:0001444!9.92e-09!11;UBERON:0000020!6.98e-08!12;UBERON:0001032!6.98e-08!12;UBERON:0004456!6.98e-08!12;UBERON:0005085!3.63e-07!13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000970,4.98e-48,9;UBERON:0000019,4.98e-48,9;UBERON:0000047,4.98e-48,9;UBERON:0010312,4.98e-48,9;UBERON:0004088,4.98e-48,9;UBERON:0002104,4.98e-48,9;UBERON:0001456,4.98e-48,9;UBERON:0003072,4.98e-48,9;UBERON:0004128,4.98e-48,9;UBERON:0003071,4.98e-48,9;UBERON:0001444,2.66e-39,11;UBERON:0000020,5.03e-36,12;UBERON:0001032,5.03e-36,12;UBERON:0004456,5.03e-36,12;UBERON:0000033,2.98e-33,13;UBERON:0005085,2.98e-33,13;UBERON:0007811,6.76e-12,36;UBERON:0003056,3.26e-11,49;UBERON:0000153,6.53e-10,43;UBERON:0004121,9.21e-09,95;UBERON:0000924,9.21e-09,95;UBERON:0006601,9.21e-09,95;UBERON:0002346,1.77e-08,64;UBERON:0003075,1.77e-08,64;UBERON:0007284,1.77e-08,64;UBERON:0010371,2.27e-07,73 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0.972149495371417,0.279972843250725,1.43752564364972,0,0,0,0,0,0,0.606949382578793,2.11596391708813,0.633831403506179,0,0,0,0,0,0,0.768436610643109,0,0,0,0,0,0.122490799214954,0.0958454710182364,0,0,0,0,0,0.0914876436024097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.59517904739626,7.12696523743766,9.18316862007281,5.57607825992146,8.50456239391598,4.99643509110914,4.77878795254617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154267112887378,0,0,0,0,0,0,0,0,0,0,0.92614151141356,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169745085775188,0,0.502518772325447,0.714130922658041,0.195133647857799,0.157635144106191,0.221464689648775,0,0,0.172684981865896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,1.62054984628179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13020438484395,0.209718688851422,0,0,0,0,0,0,0.358053391334963,0,0,0,0,0,0,0.0974578807397524,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0.170733605754134,0,0,0.183843508450014,0.222246727801615,0.206035057238894,0.320919209591815,0,0,0.188626341386076,0.187283014939765,0.256100609619477,0.287177344778066,0,0.231768651889711,0.192909220463705,0.412085900803307,0,0,0,0.476872379894642,0,0,0.0846146078916765,0.182927972872773,0.263069711437843,0,0,0.355905054372522,0.0985044823755635,0.409231043169689,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0.972149495371417,0.279972843250725,1.43752564364972,0,0,0,0,0,0,0.606949382578793,2.11596391708813,0.633831403506179,0,0,0,0,0,0,0.768436610643109,0,0,0,0,0,0.122490799214954,0.0958454710182364,0,0,0,0,0,0.0914876436024097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.59517904739626,7.12696523743766,9.18316862007281,5.57607825992146,8.50456239391598,4.99643509110914,4.77878795254617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154267112887378,0,0,0,0,0,0,0,0,0,0,0.92614151141356,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169745085775188,0,0.502518772325447,0.714130922658041,0.195133647857799,0.157635144106191,0.221464689648775,0,0,0.172684981865896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,1.62054984628179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13020438484395,0.209718688851422,0,0,0,0,0,0,0.358053391334963,0,0,0,0,0,0,0.0974578807397524,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0.170733605754134,0,0,0.183843508450014,0.222246727801615,0.206035057238894,0.320919209591815,0,0,0.188626341386076,0.187283014939765,0.256100609619477,0.287177344778066,0,0.231768651889711,0.192909220463705,0.412085900803307,0,0,0,0.476872379894642,0,0,0.0846146078916765,0.182927972872773,0.263069711437843,0,0,0.355905054372522,0.0985044823755635,0.409231043169689,0,0,0,0,0,0,0,0 | ||
|short_description=p2@Foxn4 | |||
}} | }} |
Latest revision as of 16:30, 1 October 2015
Short description: | p2@Foxn4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Foxn4_5end |
Coexpression cluster: | MCL_coexpression_mm9:133 |
Association with transcript: | -226bp_to_ENSMUST00000044790_5end |
EntrezGene: | Foxn4 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
eye | 4.98e-48 | 9 |
camera-type eye | 4.98e-48 | 9 |
simple eye | 4.98e-48 | 9 |
immature eye | 4.98e-48 | 9 |
ocular region | 4.98e-48 | 9 |
visual system | 4.98e-48 | 9 |
face | 4.98e-48 | 9 |
optic cup | 4.98e-48 | 9 |
optic vesicle | 4.98e-48 | 9 |
eye primordium | 4.98e-48 | 9 |
subdivision of head | 2.66e-39 | 11 |
sense organ | 5.03e-36 | 12 |
sensory system | 5.03e-36 | 12 |
entire sense organ system | 5.03e-36 | 12 |
head | 2.98e-33 | 13 |
ectodermal placode | 2.98e-33 | 13 |
craniocervical region | 6.76e-12 | 36 |
pre-chordal neural plate | 3.26e-11 | 49 |
anterior region of body | 6.53e-10 | 43 |
ectoderm-derived structure | 9.21e-09 | 95 |
ectoderm | 9.21e-09 | 95 |
presumptive ectoderm | 9.21e-09 | 95 |
neurectoderm | 1.77e-08 | 64 |
neural plate | 1.77e-08 | 64 |
presumptive neural plate | 1.77e-08 | 64 |
ecto-epithelium | 2.27e-07 | 73 |