FFCP PHASE1:Mm9::chr18:74893488..74893508,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=17919 | |EntrezGene=17919 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=12 | |||
|TSSclassifier=NA | |||
|UniProt=Q6PER8 | |UniProt=Q6PER8 | ||
|association_with_transcript=69bp_to_ENSMUST00000154986,uc008fps.1_5end | |association_with_transcript=69bp_to_ENSMUST00000154986,uc008fps.1_5end | ||
|cluster_id=chr18:74893488..74893508,+ | |||
|description=CAGE_peak_9_at_Myo5b_5end | |description=CAGE_peak_9_at_Myo5b_5end | ||
|id=chr18:74893488..74893508,+ | |id=chr18:74893488..74893508,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0000682,1.02e-10,3;CL:0000239,3.13e-09,6;CL:0000677,3.13e-09,6;CL:0000584,3.13e-09,6;CL:0000075,6.40e-08,7 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!8.45e-18!43;UBERON:0005409!2.39e-14!59;UBERON:0000344!1.38e-11!15;UBERON:0001242!3.52e-09!13;UBERON:0000060!3.52e-09!13;UBERON:0001262!3.52e-09!13;UBERON:0004786!3.52e-09!13 | |ontology_enrichment_uberon=UBERON:0000160!8.45e-18!43;UBERON:0005409!2.39e-14!59;UBERON:0000344!1.38e-11!15;UBERON:0001242!3.52e-09!13;UBERON:0000060!3.52e-09!13;UBERON:0001262!3.52e-09!13;UBERON:0004786!3.52e-09!13 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,5.28e-40,31;UBERON:0005409,5.10e-28,47;UBERON:0000344,3.08e-21,15;UBERON:0001242,3.37e-16,13;UBERON:0001262,3.37e-16,13;UBERON:0004786,3.37e-16,13;UBERON:0002108,1.68e-14,4;UBERON:0004923,1.32e-12,24;UBERON:0000331,1.99e-11,3;UBERON:0002116,1.99e-11,3;UBERON:0001204,1.99e-11,3;UBERON:0001168,1.99e-11,3;UBERON:0001007,3.32e-11,116;UBERON:0001555,3.32e-11,116;UBERON:0007026,3.32e-11,116;UBERON:0004119,6.11e-11,118;UBERON:0000925,6.11e-11,118;UBERON:0006595,6.11e-11,118;UBERON:0004921,3.76e-09,114;UBERON:0001155,9.86e-08,2;UBERON:0000059,9.86e-08,2;UBERON:0001962,3.30e-07,2;UBERON:0001961,3.30e-07,2;UBERON:0001744,3.30e-07,2 | |||
|phase1_expression=0,3.83872948403297,3.18499467572675,6.0492842261366,5.00895729946347,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.23989391910769,2.52350209173887,7.46501553349526,3.87685796543167,2.37018355954478,14.6318032981408,9.07308467135751,4.8780712344167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.649776417447669,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,1.25602267690966,0,0,0,0,0,0,0,0.125666591329675,0,0.578397427679647,0,0,0,0,3.72783522436244,0,0,5.8755122697976,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154267112887378,0.232533944750408,0,0,0,0,0,0,0,0.134206418760372,0,0,17.1817767151575,0.264450566663544,0,0,0,0.605050573870028,1.77902435075896,1.52180500890047,6.64340686162316,3.62337700392824,1.25667604400135,1.1937388322469,2.53453313254856,0.898819408654221,9.72621224436124,11.5501938487533,0,0,0,0,0,0.140271639780637,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.312037673114561,0,0,0.482443521363367,0,0,0,0,0,0,0.238043640886014,0,0,0,0,0,0.172684981865896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.516856586336442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16488625294148,0,0.0603129249281559,0,0,4.95517422270746,0,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0.209088296014469,0,0,0,0,7.38805347763219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0.206035057238894,0.320919209591815,0.252697211763798,0.50695859978048,0,0.0936415074698824,0,0.17230640686684,0,0.115884325944855,0.192909220463705,0,0,0,0,0,0,0,0.0846146078916765,0.548783918618318,0.263069711437843,0,0,0.118635018124174,0,0,0.154936841185966,0,0,0.233931608445408,0,0,0,0 | |phase1_expression=0,3.83872948403297,3.18499467572675,6.0492842261366,5.00895729946347,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.23989391910769,2.52350209173887,7.46501553349526,3.87685796543167,2.37018355954478,14.6318032981408,9.07308467135751,4.8780712344167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.649776417447669,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,1.25602267690966,0,0,0,0,0,0,0,0.125666591329675,0,0.578397427679647,0,0,0,0,3.72783522436244,0,0,5.8755122697976,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154267112887378,0.232533944750408,0,0,0,0,0,0,0,0.134206418760372,0,0,17.1817767151575,0.264450566663544,0,0,0,0.605050573870028,1.77902435075896,1.52180500890047,6.64340686162316,3.62337700392824,1.25667604400135,1.1937388322469,2.53453313254856,0.898819408654221,9.72621224436124,11.5501938487533,0,0,0,0,0,0.140271639780637,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.312037673114561,0,0,0.482443521363367,0,0,0,0,0,0,0.238043640886014,0,0,0,0,0,0.172684981865896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.516856586336442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16488625294148,0,0.0603129249281559,0,0,4.95517422270746,0,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0.209088296014469,0,0,0,0,7.38805347763219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0.206035057238894,0.320919209591815,0.252697211763798,0.50695859978048,0,0.0936415074698824,0,0.17230640686684,0,0.115884325944855,0.192909220463705,0,0,0,0,0,0,0,0.0846146078916765,0.548783918618318,0.263069711437843,0,0,0.118635018124174,0,0,0.154936841185966,0,0,0.233931608445408,0,0,0,0 | ||
|short_description=p9@Myo5b | |short_description=p9@Myo5b | ||
}} | }} |
Latest revision as of 17:28, 1 October 2015
Short description: | p9@Myo5b |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_9_at_Myo5b_5end |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | 69bp_to_ENSMUST00000154986, uc008fps.1_5end |
EntrezGene: | Myo5b |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
M cell of gut | 1.02e-10 | 3 |
brush border epithelial cell | 3.13e-09 | 6 |
gut absorptive cell | 3.13e-09 | 6 |
enterocyte | 3.13e-09 | 6 |
columnar/cuboidal epithelial cell | 6.40e-08 | 7 |
Ontology term | p-value | n |
---|---|---|
intestine | 5.28e-40 | 31 |
gastrointestinal system | 5.10e-28 | 47 |
mucosa | 3.08e-21 | 15 |
intestinal mucosa | 3.37e-16 | 13 |
wall of intestine | 3.37e-16 | 13 |
gastrointestinal system mucosa | 3.37e-16 | 13 |
small intestine | 1.68e-14 | 4 |
organ component layer | 1.32e-12 | 24 |
ileal mucosa | 1.99e-11 | 3 |
ileum | 1.99e-11 | 3 |
mucosa of small intestine | 1.99e-11 | 3 |
wall of small intestine | 1.99e-11 | 3 |
digestive system | 3.32e-11 | 116 |
digestive tract | 3.32e-11 | 116 |
primitive gut | 3.32e-11 | 116 |
endoderm-derived structure | 6.11e-11 | 118 |
endoderm | 6.11e-11 | 118 |
presumptive endoderm | 6.11e-11 | 118 |
subdivision of digestive tract | 3.76e-09 | 114 |
colon | 9.86e-08 | 2 |
large intestine | 9.86e-08 | 2 |
gut-associated lymphoid tissue | 3.30e-07 | 2 |
mucosa-associated lymphoid tissue | 3.30e-07 | 2 |
lymphoid tissue | 3.30e-07 | 2 |