FFCP PHASE1:Mm9::chrX:156940563..156940638,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=110094 | |EntrezGene=110094 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=Q6PE66 | |UniProt=Q6PE66 | ||
|association_with_transcript=166bp_to_ENSMUST00000112376_5end | |association_with_transcript=166bp_to_ENSMUST00000112376_5end | ||
|cluster_id=chrX:156940563..156940638,+ | |||
|description=CAGE_peak_2_at_Phka2_5end | |description=CAGE_peak_2_at_Phka2_5end | ||
|id=chrX:156940563..156940638,+ | |id=chrX:156940563..156940638,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003914!1.92e-14!47;UBERON:0002107!2.29e-08!22;UBERON:0007499!2.29e-08!22;UBERON:0006925!2.29e-08!22;UBERON:0009497!2.29e-08!22;UBERON:0000015!2.29e-08!22;UBERON:0002423!2.29e-08!22;UBERON:0006235!2.29e-08!22;UBERON:0008835!2.29e-08!22;UBERON:0003894!2.29e-08!22;UBERON:0004161!2.29e-08!22;UBERON:0008836!2.29e-08!22;UBERON:0004872!6.81e-08!33;UBERON:0002365!1.10e-07!25;UBERON:0002330!1.10e-07!25;UBERON:0009854!1.27e-07!23;UBERON:0009856!1.27e-07!23;UBERON:0007100!2.65e-07!18;UBERON:0000948!2.65e-07!18;UBERON:0005498!2.65e-07!18;UBERON:0004140!2.65e-07!18;UBERON:0009881!2.65e-07!18;UBERON:0004141!2.65e-07!18;UBERON:0003084!2.65e-07!18;UBERON:0007005!2.65e-07!18;UBERON:0004139!2.65e-07!18;UBERON:0004291!2.65e-07!18;UBERON:0004535!4.72e-07!23;UBERON:0001009!4.72e-07!23 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003914,1.88e-14,47;UBERON:0002107,2.26e-08,22;UBERON:0007499,2.26e-08,22;UBERON:0006925,2.26e-08,22;UBERON:0009497,2.26e-08,22;UBERON:0000015,2.26e-08,22;UBERON:0002423,2.26e-08,22;UBERON:0006235,2.26e-08,22;UBERON:0008835,2.26e-08,22;UBERON:0003894,2.26e-08,22;UBERON:0004161,2.26e-08,22;UBERON:0008836,2.26e-08,22;UBERON:0004872,6.73e-08,33;UBERON:0002365,1.09e-07,25;UBERON:0002330,1.09e-07,25;UBERON:0009854,1.25e-07,23;UBERON:0009856,1.25e-07,23;UBERON:0007100,2.62e-07,18;UBERON:0000948,2.62e-07,18;UBERON:0005498,2.62e-07,18;UBERON:0004140,2.62e-07,18;UBERON:0009881,2.62e-07,18;UBERON:0004141,2.62e-07,18;UBERON:0003084,2.62e-07,18;UBERON:0007005,2.62e-07,18;UBERON:0004139,2.62e-07,18;UBERON:0004291,2.62e-07,18;UBERON:0004535,4.67e-07,23;UBERON:0001009,4.67e-07,23 | |||
|phase1_expression=3.36312578920067,0,0,1.20985684522732,0,0.839396359559449,1.63528848416868,1.42035655785734,0.563154888606667,0.468129052643987,0,0.0797721589953364,0.856003649656029,1.04904482902797,5.99597571268193,6.2767332890846,4.19737126876888,2.36596624018678,1.50825876966313,1.27316895539409,2.8064285749853,30.3830310674709,29.7767759618386,0.639969691173627,1.37645568640302,0.57423196411502,1.29228598847722,0.430942465371778,0.950117097281869,1.51218077855958,1.55211357458713,2.54012269383853,0.61506478758457,0,4.33277429626912,2.32728503501889,2.24586291888606,10.0447591376858,10.9386948233332,13.088093599345,7.64700934440319,12.294818729252,10.6812277666854,3.52511090331616,3.85232338634155,4.40512205188036,5.47673941043627,1.52617609466313,1.97717564461025,1.94429899074283,5.31948402176378,1.43752564364972,1.8456086666351,0,0.672187598284928,4.3734104126111,5.73066879877513,5.67239301505187,0.606949382578793,0.528990979272033,0,4.40497891689872,6.22506357277798,5.84934816232909,2.96659908770092,3.5524005747305,3.29560121570245,2.30530983192933,1.34796496001021,1.08004750665353,1.26194976810829,1.14260393761521,1.10434270475807,0.367472397644862,0.862609239164127,0,4.40463523997555,3.19218345212969,2.61131106535614,0.923204014111357,0.365950574409639,0,1.67509799400829,0.56276261003168,2.29197371665215,2.94628585473668,1.70846016958924,0.559198337475902,1.59025005999687,5.06329452715463,2.31891590961342,5.16254326188832,3.39985666853875,5.39703191637817,7.79731700937203,7.6164570806547,3.08977724289854,10.9075406449957,11.4305842025262,7.77347063922748,2.39433813620357,2.56652954828636,2.54805239706646,14.2213340630666,2.38140145112336,2.28023878927589,0.505524445014783,3.08296475241462,5.69663344023778,3.41416919849097,2.25530924795977,2.74018930480927,1.61430848079241,2.56228488939458,5.05631440683531,3.01599819191221,5.43828929015623,13.4477401935518,6.19227386364912,5.66183974815932,7.95029466457417,8.24287930329878,1.86391761218122,3.80615036115011,2.93225389538837,1.78819938646014,16.7741174308288,11.3981518888747,21.0936576941287,3.14560342750128,1.83000241127451,0.753926112677186,5.56237824615285,5.11430914660661,2.70124457927428,2.59586020908412,2.74966282395854,7.46441823660558,2.27450482590307,3.57751155007006,2.86264974517948,0.919608417733892,1.62055916824814,2.71268672104287,3.46986145671772,1.5373646434182,1.40552586839593,1.81092359517311,1.94011193639558,1.70195472151037,6.68614271823006,4.60311038097907,5.56094498451196,4.87553033131033,5.76189981942242,3.58261680273288,12.6398373716382,14.6688307055388,14.2081749697796,9.32065976409758,7.03578179943289,7.92273070428465,8.52281048106757,10.6252685143598,10.9529650150039,9.53389173476672,12.0723030629829,9.10769670463922,9.70903114489535,5.58169377868924,5.26947262048062,5.4093995347373,6.14740322814942,4.42881181909227,2.94405927989778,1.13195073617213,1.32167513193519,0.793351699990633,1.91959425481711,3.48355007790658,2.83508414908605,2.42020229548011,0.889512175379481,1.33157938278791,2.84717436926707,1.4822905925161,1.50801125280162,2.18852119245266,1.9496408711912,2.69645822596266,2.59365659849633,1.99141273254367,2.0863469104839,3.42745537829186,5.63538678365402,3.25842124552503,2.71533482034676,2.52488951605147,4.86921335856781,3.24742325555125,2.35498091762062,4.19550357334122,3.85388415213294,6.00642380577939,6.4864468387357,10.5685192820881,11.3601667977562,7.95884627182976,6.3656462945355,9.78166867332756,7.94462611197673,9.06052663520669,11.5014565221884,10.0478055870496,8.7370548472077,11.36604950762,9.86685774370517,12.0610880340842,4.43407656399851,2.08440552947533,3.09633455239849,3.73439188705414,5.39787571063555,6.365237782789,3.57065461329021,3.90267295715598,4.25614889086716,3.32197034473162,2.39182152986231,3.27726629431476,2.59027472798843,3.90552458170081,19.6028669121054,16.3171705145613,3.93411418415229,3.86311444826625,2.40825884981688,3.39913891117389,2.78689407140348,3.53459298086122,1.57754109708128,1.95219372148319,2.15423397732799,1.43381278771531,1.33679204449436,2.26461224631066,1.61924280669958,2.92255857911312,1.18586333383957,3.21321316421807,4.68402281187286,2.84904965867608,2.60619134965722,2.96946221350564,1.32745138339963,4.37005145078967,1.51161778482376,3.39489143560617,1.47650946440386,2.15204603560749,3.35956781118687,2.54473610634254,2.49548164869305,2.21225730555071,1.05418608574999,1.03135543248187,3.06395645178409,3.6012218806262,2.06973894052407,4.28674070063185,3.54680467284547,3.38900753443934,4.44282355625727,0.913394847343798,1.87737366450968,2.75381692122966,2.20528398054962,8.244312647074,9.52640117505843,4.28221766989907,3.81991500810037,1.64140899745061,1.45740418314925,2.22510362412612,5.80960994712699,4.74689796315412,6.66700298530962,7.53473828018764,9.02181902958766,5.71945433016307,5.60928818979723,7.27747552083022,7.32459861163446,3.81868247206045,2.37251995185852,3.45643094115643,3.13215488383224,2.09088296014469,4.14888871117737,5.39457385539283,4.79390043206948,5.23511883968059,2.20345454596048,2.4853572523477,0.56369293868419,2.69129782879162,1.65458490457098,1.75006069509643,2.45403664607689,4.56181538825101,2.93393096614385,2.0832701575032,3.98465508817701,1.44950472495604,2.01621004380506,2.21207784439725,3.44632865993279,3.49217254360413,3.24802057444488,4.47566739168704,2.98022032171897,3.72605893511903,2.06765338044408,3.12995994839258,3.42930629947499,2.72230699869469,3.11865218367208,2.02044867444692,3.62318396762864,0.906921534460845,1.77588762699252,0.986852422704233,1.17519231454855,5.21611903886914,3.75364950902364,2.93042598827624,1.92931541171159,1.50471631210609,5.0827665835536,2.30162618253588,2.86447756719698,4.29632955859219,1.37016503954128,4.5323633843382,2.02506750069542,4.05289082901798,4.53142408984205,2.5888015587591,2.28332164685189,1.99512436700516,4.26834014385335,6.56388136084394,3.98265008993166,2.94149613520023,5.33392146723877,4.32673620201678,4.1719497246936,7.32821914115013,5.0695859978048,6.97917463128482,5.99305647807247,5.95433917365284,6.66251439885114,8.57328644309533,7.88013416425017,5.98018583437486,4.53294490883637,5.2991611248383,4.11443102862498,5.14679837862079,8.34526664815623,5.37781741539616,5.74067220533517,6.17686637609238,6.58540702341981,4.73525480588117,6.79020569229309,6.73370725989286,5.93175090620871,5.41774653065599,5.32000356120596,5.11291575913688,6.94463799532109,2.49810577937946,6.78401664491684,6.01638951335235,4.3996316375834,2.64709702943419,2.55054619182464 | |phase1_expression=3.36312578920067,0,0,1.20985684522732,0,0.839396359559449,1.63528848416868,1.42035655785734,0.563154888606667,0.468129052643987,0,0.0797721589953364,0.856003649656029,1.04904482902797,5.99597571268193,6.2767332890846,4.19737126876888,2.36596624018678,1.50825876966313,1.27316895539409,2.8064285749853,30.3830310674709,29.7767759618386,0.639969691173627,1.37645568640302,0.57423196411502,1.29228598847722,0.430942465371778,0.950117097281869,1.51218077855958,1.55211357458713,2.54012269383853,0.61506478758457,0,4.33277429626912,2.32728503501889,2.24586291888606,10.0447591376858,10.9386948233332,13.088093599345,7.64700934440319,12.294818729252,10.6812277666854,3.52511090331616,3.85232338634155,4.40512205188036,5.47673941043627,1.52617609466313,1.97717564461025,1.94429899074283,5.31948402176378,1.43752564364972,1.8456086666351,0,0.672187598284928,4.3734104126111,5.73066879877513,5.67239301505187,0.606949382578793,0.528990979272033,0,4.40497891689872,6.22506357277798,5.84934816232909,2.96659908770092,3.5524005747305,3.29560121570245,2.30530983192933,1.34796496001021,1.08004750665353,1.26194976810829,1.14260393761521,1.10434270475807,0.367472397644862,0.862609239164127,0,4.40463523997555,3.19218345212969,2.61131106535614,0.923204014111357,0.365950574409639,0,1.67509799400829,0.56276261003168,2.29197371665215,2.94628585473668,1.70846016958924,0.559198337475902,1.59025005999687,5.06329452715463,2.31891590961342,5.16254326188832,3.39985666853875,5.39703191637817,7.79731700937203,7.6164570806547,3.08977724289854,10.9075406449957,11.4305842025262,7.77347063922748,2.39433813620357,2.56652954828636,2.54805239706646,14.2213340630666,2.38140145112336,2.28023878927589,0.505524445014783,3.08296475241462,5.69663344023778,3.41416919849097,2.25530924795977,2.74018930480927,1.61430848079241,2.56228488939458,5.05631440683531,3.01599819191221,5.43828929015623,13.4477401935518,6.19227386364912,5.66183974815932,7.95029466457417,8.24287930329878,1.86391761218122,3.80615036115011,2.93225389538837,1.78819938646014,16.7741174308288,11.3981518888747,21.0936576941287,3.14560342750128,1.83000241127451,0.753926112677186,5.56237824615285,5.11430914660661,2.70124457927428,2.59586020908412,2.74966282395854,7.46441823660558,2.27450482590307,3.57751155007006,2.86264974517948,0.919608417733892,1.62055916824814,2.71268672104287,3.46986145671772,1.5373646434182,1.40552586839593,1.81092359517311,1.94011193639558,1.70195472151037,6.68614271823006,4.60311038097907,5.56094498451196,4.87553033131033,5.76189981942242,3.58261680273288,12.6398373716382,14.6688307055388,14.2081749697796,9.32065976409758,7.03578179943289,7.92273070428465,8.52281048106757,10.6252685143598,10.9529650150039,9.53389173476672,12.0723030629829,9.10769670463922,9.70903114489535,5.58169377868924,5.26947262048062,5.4093995347373,6.14740322814942,4.42881181909227,2.94405927989778,1.13195073617213,1.32167513193519,0.793351699990633,1.91959425481711,3.48355007790658,2.83508414908605,2.42020229548011,0.889512175379481,1.33157938278791,2.84717436926707,1.4822905925161,1.50801125280162,2.18852119245266,1.9496408711912,2.69645822596266,2.59365659849633,1.99141273254367,2.0863469104839,3.42745537829186,5.63538678365402,3.25842124552503,2.71533482034676,2.52488951605147,4.86921335856781,3.24742325555125,2.35498091762062,4.19550357334122,3.85388415213294,6.00642380577939,6.4864468387357,10.5685192820881,11.3601667977562,7.95884627182976,6.3656462945355,9.78166867332756,7.94462611197673,9.06052663520669,11.5014565221884,10.0478055870496,8.7370548472077,11.36604950762,9.86685774370517,12.0610880340842,4.43407656399851,2.08440552947533,3.09633455239849,3.73439188705414,5.39787571063555,6.365237782789,3.57065461329021,3.90267295715598,4.25614889086716,3.32197034473162,2.39182152986231,3.27726629431476,2.59027472798843,3.90552458170081,19.6028669121054,16.3171705145613,3.93411418415229,3.86311444826625,2.40825884981688,3.39913891117389,2.78689407140348,3.53459298086122,1.57754109708128,1.95219372148319,2.15423397732799,1.43381278771531,1.33679204449436,2.26461224631066,1.61924280669958,2.92255857911312,1.18586333383957,3.21321316421807,4.68402281187286,2.84904965867608,2.60619134965722,2.96946221350564,1.32745138339963,4.37005145078967,1.51161778482376,3.39489143560617,1.47650946440386,2.15204603560749,3.35956781118687,2.54473610634254,2.49548164869305,2.21225730555071,1.05418608574999,1.03135543248187,3.06395645178409,3.6012218806262,2.06973894052407,4.28674070063185,3.54680467284547,3.38900753443934,4.44282355625727,0.913394847343798,1.87737366450968,2.75381692122966,2.20528398054962,8.244312647074,9.52640117505843,4.28221766989907,3.81991500810037,1.64140899745061,1.45740418314925,2.22510362412612,5.80960994712699,4.74689796315412,6.66700298530962,7.53473828018764,9.02181902958766,5.71945433016307,5.60928818979723,7.27747552083022,7.32459861163446,3.81868247206045,2.37251995185852,3.45643094115643,3.13215488383224,2.09088296014469,4.14888871117737,5.39457385539283,4.79390043206948,5.23511883968059,2.20345454596048,2.4853572523477,0.56369293868419,2.69129782879162,1.65458490457098,1.75006069509643,2.45403664607689,4.56181538825101,2.93393096614385,2.0832701575032,3.98465508817701,1.44950472495604,2.01621004380506,2.21207784439725,3.44632865993279,3.49217254360413,3.24802057444488,4.47566739168704,2.98022032171897,3.72605893511903,2.06765338044408,3.12995994839258,3.42930629947499,2.72230699869469,3.11865218367208,2.02044867444692,3.62318396762864,0.906921534460845,1.77588762699252,0.986852422704233,1.17519231454855,5.21611903886914,3.75364950902364,2.93042598827624,1.92931541171159,1.50471631210609,5.0827665835536,2.30162618253588,2.86447756719698,4.29632955859219,1.37016503954128,4.5323633843382,2.02506750069542,4.05289082901798,4.53142408984205,2.5888015587591,2.28332164685189,1.99512436700516,4.26834014385335,6.56388136084394,3.98265008993166,2.94149613520023,5.33392146723877,4.32673620201678,4.1719497246936,7.32821914115013,5.0695859978048,6.97917463128482,5.99305647807247,5.95433917365284,6.66251439885114,8.57328644309533,7.88013416425017,5.98018583437486,4.53294490883637,5.2991611248383,4.11443102862498,5.14679837862079,8.34526664815623,5.37781741539616,5.74067220533517,6.17686637609238,6.58540702341981,4.73525480588117,6.79020569229309,6.73370725989286,5.93175090620871,5.41774653065599,5.32000356120596,5.11291575913688,6.94463799532109,2.49810577937946,6.78401664491684,6.01638951335235,4.3996316375834,2.64709702943419,2.55054619182464 | ||
|short_description=p2@Phka2 | |short_description=p2@Phka2 | ||
}} | }} |
Latest revision as of 17:44, 1 October 2015
Short description: | p2@Phka2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Phka2_5end |
Coexpression cluster: | NA |
Association with transcript: | 166bp_to_ENSMUST00000112376_5end |
EntrezGene: | Phka2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial tube | 1.88e-14 | 47 |
liver | 2.26e-08 | 22 |
epithelial sac | 2.26e-08 | 22 |
digestive gland | 2.26e-08 | 22 |
epithelium of foregut-midgut junction | 2.26e-08 | 22 |
anatomical boundary | 2.26e-08 | 22 |
hepatobiliary system | 2.26e-08 | 22 |
foregut-midgut junction | 2.26e-08 | 22 |
hepatic diverticulum | 2.26e-08 | 22 |
liver primordium | 2.26e-08 | 22 |
septum transversum | 2.26e-08 | 22 |
liver bud | 2.26e-08 | 22 |
splanchnic layer of lateral plate mesoderm | 6.73e-08 | 33 |
exocrine gland | 1.09e-07 | 25 |
exocrine system | 1.09e-07 | 25 |
digestive tract diverticulum | 1.25e-07 | 23 |
sac | 1.25e-07 | 23 |
primary circulatory organ | 2.62e-07 | 18 |
heart | 2.62e-07 | 18 |
primitive heart tube | 2.62e-07 | 18 |
primary heart field | 2.62e-07 | 18 |
anterior lateral plate mesoderm | 2.62e-07 | 18 |
heart tube | 2.62e-07 | 18 |
heart primordium | 2.62e-07 | 18 |
cardiac mesoderm | 2.62e-07 | 18 |
cardiogenic plate | 2.62e-07 | 18 |
heart rudiment | 2.62e-07 | 18 |
cardiovascular system | 4.67e-07 | 23 |
circulatory system | 4.67e-07 | 23 |