Personal tools

FFCP PHASE1:Mm9::chrX:159081478..159081505,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
(Created page with "{{FFCP |id=chrX:159081478..159081505,- |short_description=p3@Reps2 |description=CAGE_peak_3_at_Reps2_5end |association_with_transcript=27bp_to_ENSMUST00000101102,NM_178256...")
 
No edit summary
 
(8 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|id=chrX:159081478..159081505,-
|DHSsupport=NA
|short_description=p3@Reps2
|DPIdataset=NA
|description=CAGE_peak_3_at_Reps2_5end
|association_with_transcript=27bp_to_ENSMUST00000101102,NM_178256,uc009uue.1,uc012hri.1_5end
|EntrezGene=194590
|EntrezGene=194590
|HGNC=
|HGNC=
|MCL_coexpression_id=2507
|TSSclassifier=NA
|UniProt=B9EI38,Q3UHE9,Q3UHF8,Q80XA6,A2AFI8
|UniProt=B9EI38,Q3UHE9,Q3UHF8,Q80XA6,A2AFI8
|association_with_transcript=27bp_to_ENSMUST00000101102,NM_178256,uc009uue.1,uc012hri.1_5end
|cluster_id=chrX:159081478..159081505,-
|description=CAGE_peak_3_at_Reps2_5end
|id=chrX:159081478..159081505,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0007023!8.85e-11!51;UBERON:0000955!1.25e-08!50;UBERON:0006238!1.25e-08!50;UBERON:0002616!1.74e-08!49;UBERON:0000033!5.05e-08!63;UBERON:0002021!7.57e-08!10;UBERON:0000411!7.57e-08!10;UBERON:0001950!7.57e-08!10
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.30e-10,51;UBERON:0002021,5.46e-09,10;UBERON:0000411,5.46e-09,10;UBERON:0001950,5.46e-09,10;UBERON:0000955,4.17e-08,47;UBERON:0006238,4.17e-08,47;UBERON:0002616,6.09e-08,46;UBERON:0000073,1.72e-07,54
|phase1_expression=4.32401887182944,4.18770489167233,4.09499315450582,4.23449895829562,9.01612313903425,2.85394762250213,1.63528848416868,0,0,0,0,0,0,0,0.666219523631325,1.01237633694913,0.699561878128147,0,0,0,3.82694805679814,0,0,0.47997726838022,1.83527424853736,4.01962374880514,3.4460959692726,2.15471232685889,2.09025761402011,3.2763916868791,2.21730510655305,0,0,0,1.44425809875637,0.498703936075477,1.63335485009895,0.418531630736908,0,0.523523743973798,0,0.683045484958446,0.971020706062307,0.125896817975577,0,0,1.56478268869608,0,0.219686182734472,0.194429899074283,0.979904951377538,0,0,0,0,0,0.286533439938757,0.515672092277442,0.606949382578793,0,0.633831403506179,0,1.77858959222228,0.449949858640699,2.96659908770092,2.1314403448383,1.79760066311043,0.384218305321555,0.311068836925433,0.135005938331691,0.420649922702764,0.856952953211411,0.220868540951614,0.367472397644862,0.0958454710182364,0,11.0115880999389,15.3224805702225,11.2132769277058,0.659431438650969,0.365950574409639,1.04182674111352,4.18774498502071,5.6276261003168,5.80633341551878,0.294628585473668,0.711858403995515,0.372798891650601,0,0.151143120213571,0.579728977403356,1.72084775396277,2.03991400112325,2.15881276655127,4.54843492213368,4.48026887097336,2.10666630197628,0,0,0,0,0,0,0,0,0,0,2.62622923353838,1.55362730188303,0.29688427812965,0.173485326766136,0.913396434936424,0.461230994512117,0.301445281105245,1.17588707135705,0.502666365318702,0.988779870937496,0.722996784599558,2.65383165584962,1.61766849947409,1.54589062922275,1.93950101254089,0,5.27005434620785,4.81727425670947,3.83185582812887,0.11981512450592,0,0,7.63932260964596,5.03250663100489,1.13088916901578,15.4703644971126,16.8772201838018,10.5971902725376,12.6548185192851,1.42575109390443,1.24406970610093,4.0435641349388,1.68353484709179,0,0.229902104433473,1.0803727788321,1.05493372485001,0.612328492361951,1.15302348256365,1.21812241927647,1.55222022443409,0,0.189106080167819,0,1.31517439456545,1.11218899690239,1.0447564995665,0.61734640922383,0.398068533636986,0,0,0.284163499395593,0.207125772535502,0,0,0.23674473558521,0.196764231747404,0.154267112887378,0,0,0.350296027101508,0,0,0.56748166682099,0.292399974850665,0.439100230582101,1.20785776884335,11.7762371195911,1.3377599609307,7.26921322564356,0.528901133327089,0,0,0.515469845288373,0.201683524623343,0.22237804384487,0.190225626112559,0.949058123089023,0.494096864172033,1.00534083520108,0.397912944082302,0.779856348476481,0.898819408654221,1.51296634912286,4.18196673834171,0.569003702859245,0.342745537829186,1.1270773567308,0.610953983535943,0.387904974335251,0.631222379012867,1.07502113111237,0.885660887877613,0.941992367048249,0.616985819609003,4.44678940630723,0.667380422864376,0.196558995113203,0.674586337154561,0.405720242777006,0.72353147925725,0,1.72617682470486,1.62135226775035,0.823684239564244,1.43768206527355,2.23284568601102,0.936113019343682,3.28352541331245,1.4351793081753,5.30687873499704,7.20537441649758,0.37898282354097,0.325929952884052,0.169745085775188,0,0.670025029767263,2.14239276797412,1.75620283072019,3.4679731703362,3.32197034473162,4.46473352240964,4.42430949732493,7.59813920209941,7.5217510462386,6.03165135757089,0.54390568381871,0.983528546038072,1.10374698521893,4.49541651965817,3.6335622843583,0,1.26235463602186,0.94652465824877,0.390438744296638,0.430846795465598,0.238968797952552,0,0.283076530788832,0.404810701674894,0.292255857911312,0,1.60660658210904,2.2710413633323,0.712262414669021,1.46598263418218,4.28922319728592,10.619611067197,0,0,0.188605079755898,0.590603785761546,0.307435147943927,0.258428293168221,2.18120237686503,1.06949213515416,1.58018378967908,5.27093042874994,6.18813259489121,5.7874732978144,0.540183282093931,0.129358683782755,1.71469628025274,1.41872186913819,1.96205699362278,2.30368628842969,0.608929898229199,0.704015124191131,2.33015277950202,3.52845436887939,2.30840754118072,0.645857706783622,1.26657142349127,0.835606408021955,0.984845398470368,1.7488850197791,3.52308073819968,0.854354403989263,0.412773735926445,0,0.188368457004691,0.546776910884101,0.915112692826091,0.169978429993855,0.139951452323658,0.414599921413271,1.90934123603023,0,0.406638934253697,0.86404272657441,0.836353184057875,0.655087691238533,1.21377911746339,1.81837602595739,2.35580347785627,0.777689839750757,6.83473244395618,0,0.299033092087958,1.32366792365678,2.91676782516071,2.0665571756437,2.87225413334323,3.75543163666413,2.3436789271911,2.62148361064277,1.20792060413003,0.864090018773596,0,0,0,0.129920822977795,0,0,0,0.295379054349154,0.100966449948148,0.15241361331,0.201652370273681,0.292373642219257,0.0962118416403295,0,1.13365191807606,0.221985953374065,0,0,4.25017106870819,0.93841237725591,4.02933573387983,3.00115730710692,7.02200945649509,6.7770221114048,11.9684561491866,12.0308057822273,10.3111909406213,17.8121455140367,17.3740596399631,6.75022500231806,13.9599572999508,16.7662691324156,12.9440077937955,0.207574695168353,0.399024873401031,0.853668028770671,1.45864030240976,1.04806581313991,1.2869045591501,1.55572709461131,0.206035057238894,0.962757628775446,1.51618327058278,1.52087579934144,0.943131706930381,2.24739617927718,1.15245274328765,1.55075766180156,0.952587382566147,1.73826488917283,1.73618298417335,1.64834360321323,1.47198920134397,1.37147700954166,1.06485483695602,0.953744759789284,1.30811774969096,1.03520318456864,1.69229215783353,1.64635175585495,1.57841826862706,1.49384525230448,1.12228454331548,2.37270036248348,1.18205378850676,1.22769312950907,1.08455788830176,0.771626443924566,1.74867404556562,1.16965804222704,1.28922632428979,2.10417165275728,1.32354851471709,1.15933917810211
|phase1_expression=4.32401887182944,4.18770489167233,4.09499315450582,4.23449895829562,9.01612313903425,2.85394762250213,1.63528848416868,0,0,0,0,0,0,0,0.666219523631325,1.01237633694913,0.699561878128147,0,0,0,3.82694805679814,0,0,0.47997726838022,1.83527424853736,4.01962374880514,3.4460959692726,2.15471232685889,2.09025761402011,3.2763916868791,2.21730510655305,0,0,0,1.44425809875637,0.498703936075477,1.63335485009895,0.418531630736908,0,0.523523743973798,0,0.683045484958446,0.971020706062307,0.125896817975577,0,0,1.56478268869608,0,0.219686182734472,0.194429899074283,0.979904951377538,0,0,0,0,0,0.286533439938757,0.515672092277442,0.606949382578793,0,0.633831403506179,0,1.77858959222228,0.449949858640699,2.96659908770092,2.1314403448383,1.79760066311043,0.384218305321555,0.311068836925433,0.135005938331691,0.420649922702764,0.856952953211411,0.220868540951614,0.367472397644862,0.0958454710182364,0,11.0115880999389,15.3224805702225,11.2132769277058,0.659431438650969,0.365950574409639,1.04182674111352,4.18774498502071,5.6276261003168,5.80633341551878,0.294628585473668,0.711858403995515,0.372798891650601,0,0.151143120213571,0.579728977403356,1.72084775396277,2.03991400112325,2.15881276655127,4.54843492213368,4.48026887097336,2.10666630197628,0,0,0,0,0,0,0,0,0,0,2.62622923353838,1.55362730188303,0.29688427812965,0.173485326766136,0.913396434936424,0.461230994512117,0.301445281105245,1.17588707135705,0.502666365318702,0.988779870937496,0.722996784599558,2.65383165584962,1.61766849947409,1.54589062922275,1.93950101254089,0,5.27005434620785,4.81727425670947,3.83185582812887,0.11981512450592,0,0,7.63932260964596,5.03250663100489,1.13088916901578,15.4703644971126,16.8772201838018,10.5971902725376,12.6548185192851,1.42575109390443,1.24406970610093,4.0435641349388,1.68353484709179,0,0.229902104433473,1.0803727788321,1.05493372485001,0.612328492361951,1.15302348256365,1.21812241927647,1.55222022443409,0,0.189106080167819,0,1.31517439456545,1.11218899690239,1.0447564995665,0.61734640922383,0.398068533636986,0,0,0.284163499395593,0.207125772535502,0,0,0.23674473558521,0.196764231747404,0.154267112887378,0,0,0.350296027101508,0,0,0.56748166682099,0.292399974850665,0.439100230582101,1.20785776884335,11.7762371195911,1.3377599609307,7.26921322564356,0.528901133327089,0,0,0.515469845288373,0.201683524623343,0.22237804384487,0.190225626112559,0.949058123089023,0.494096864172033,1.00534083520108,0.397912944082302,0.779856348476481,0.898819408654221,1.51296634912286,4.18196673834171,0.569003702859245,0.342745537829186,1.1270773567308,0.610953983535943,0.387904974335251,0.631222379012867,1.07502113111237,0.885660887877613,0.941992367048249,0.616985819609003,4.44678940630723,0.667380422864376,0.196558995113203,0.674586337154561,0.405720242777006,0.72353147925725,0,1.72617682470486,1.62135226775035,0.823684239564244,1.43768206527355,2.23284568601102,0.936113019343682,3.28352541331245,1.4351793081753,5.30687873499704,7.20537441649758,0.37898282354097,0.325929952884052,0.169745085775188,0,0.670025029767263,2.14239276797412,1.75620283072019,3.4679731703362,3.32197034473162,4.46473352240964,4.42430949732493,7.59813920209941,7.5217510462386,6.03165135757089,0.54390568381871,0.983528546038072,1.10374698521893,4.49541651965817,3.6335622843583,0,1.26235463602186,0.94652465824877,0.390438744296638,0.430846795465598,0.238968797952552,0,0.283076530788832,0.404810701674894,0.292255857911312,0,1.60660658210904,2.2710413633323,0.712262414669021,1.46598263418218,4.28922319728592,10.619611067197,0,0,0.188605079755898,0.590603785761546,0.307435147943927,0.258428293168221,2.18120237686503,1.06949213515416,1.58018378967908,5.27093042874994,6.18813259489121,5.7874732978144,0.540183282093931,0.129358683782755,1.71469628025274,1.41872186913819,1.96205699362278,2.30368628842969,0.608929898229199,0.704015124191131,2.33015277950202,3.52845436887939,2.30840754118072,0.645857706783622,1.26657142349127,0.835606408021955,0.984845398470368,1.7488850197791,3.52308073819968,0.854354403989263,0.412773735926445,0,0.188368457004691,0.546776910884101,0.915112692826091,0.169978429993855,0.139951452323658,0.414599921413271,1.90934123603023,0,0.406638934253697,0.86404272657441,0.836353184057875,0.655087691238533,1.21377911746339,1.81837602595739,2.35580347785627,0.777689839750757,6.83473244395618,0,0.299033092087958,1.32366792365678,2.91676782516071,2.0665571756437,2.87225413334323,3.75543163666413,2.3436789271911,2.62148361064277,1.20792060413003,0.864090018773596,0,0,0,0.129920822977795,0,0,0,0.295379054349154,0.100966449948148,0.15241361331,0.201652370273681,0.292373642219257,0.0962118416403295,0,1.13365191807606,0.221985953374065,0,0,4.25017106870819,0.93841237725591,4.02933573387983,3.00115730710692,7.02200945649509,6.7770221114048,11.9684561491866,12.0308057822273,10.3111909406213,17.8121455140367,17.3740596399631,6.75022500231806,13.9599572999508,16.7662691324156,12.9440077937955,0.207574695168353,0.399024873401031,0.853668028770671,1.45864030240976,1.04806581313991,1.2869045591501,1.55572709461131,0.206035057238894,0.962757628775446,1.51618327058278,1.52087579934144,0.943131706930381,2.24739617927718,1.15245274328765,1.55075766180156,0.952587382566147,1.73826488917283,1.73618298417335,1.64834360321323,1.47198920134397,1.37147700954166,1.06485483695602,0.953744759789284,1.30811774969096,1.03520318456864,1.69229215783353,1.64635175585495,1.57841826862706,1.49384525230448,1.12228454331548,2.37270036248348,1.18205378850676,1.22769312950907,1.08455788830176,0.771626443924566,1.74867404556562,1.16965804222704,1.28922632428979,2.10417165275728,1.32354851471709,1.15933917810211
|short_description=p3@Reps2
}}
}}

Latest revision as of 17:56, 1 October 2015

Short description:p3@Reps2
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Reps2_5end
Coexpression cluster:MCL_coexpression_mm9:2507
Association with transcript: 27bp_to_ENSMUST00000101102, NM_178256, uc009uue.1, uc012hri.1_5end
EntrezGene:Reps2
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Reps2

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G74.32
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I54.19
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I64.09
CD326+ enterocyte, pool1.CNhs13542.11848-124I34.23
CD326+ enterocyte, pool2.CNhs13197.11849-124I49.02
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I72.85
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I81.64
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.67
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A31.01
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.70
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A33.83
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.48
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D21.84
GP2+ M cell, pool1.CNhs13228.11845-124H94.02
GP2+ M cell, pool2.CNhs13231.11846-124I13.45
GP2+ M cell, pool3.CNhs13240.11847-124I22.15
Ileum epithelium, pool1.CNhs13199.10252-104B92.09
Ileum epithelium, pool2.CNhs13232.10253-104C13.28
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C82.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F51.44
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.50
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F71.63
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.42
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.52
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.68
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.97
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.13
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B71.56
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.98
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C30.61
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D11.78
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E72.97
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D22.13
Mouse Microglia, donor1.CNhs12629.11718-123C81.80
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.31
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.14
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.42
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.86
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.22
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.37
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.10
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D311.01
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F315.32
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D711.21
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.66
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.37
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.04
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E44.19
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E55.63
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I65.81
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.29
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.71
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.37
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.15
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.58
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F71.72
Mouse hepatocyte, donor1.CNhs13078.11714-123C42.04
Mouse hepatocyte, donor3.CNhs12615.11637-122C82.16
Mouse hepatocyte, donor6.CNhs13090.11822-124F44.55
Mouse hepatocyte, donor8.CNhs13091.11824-124F64.48
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A72.11
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B62.63
accessory axillary lymph node, adult.CNhs10475.1063-29H91.55
adrenal gland, adult.CNhs10508.49-24D70.30
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.91
adrenal gland, embryo E17.CNhs11043.1263-45I10.46
adrenal gland, embryo E18.CNhs11026.1262-18F50.30
adrenal gland, neonate N00.CNhs11191.1311-23C11.18
adrenal gland, neonate N25.CNhs11223.1377-27I30.50
amnion, adult pregnant day17.5.CNhs10488.583-22A80.99
aorta, adult.CNhs10498.46-23H10.72
bone (os femoris), adult.CNhs10483.56-12G22.65
bone (os femoris), neonate N02.CNhs11227.1985-43F51.62
bone (os femoris), neonate N16.CNhs11225.1525-43A61.55
bone (os femoris), neonate N20.CNhs11195.1350-25C31.94
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B25.27
cerebellum, neonate N30.CNhs11135.1395-42I24.82
colon, adult.CNhs10468.36-18H73.83
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.12
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A47.64
corpus striatum, adult.CNhs10487.19-21D85.03
corpus striatum, neonate N00.CNhs11226.630-43F11.13
cortex, adult.CNhs10473.12-14D515.47
cortex, neonate N30.CNhs11107.1392-42F216.88
diencephalon, adult.CNhs10482.20-12F210.60
diencephalon, neonate N30.CNhs11201.1388-42B212.65
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.43
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.24
epididymis, adult.CNhs10490.58-23B24.04
eyeball, adult.CNhs10484.31-12G41.68
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C91.08
eyeball, embryo E17.CNhs11023.1261-18D41.05
eyeball, neonate N00.CNhs11207.633-15C60.61
eyeball, neonate N01.CNhs11140.1532-43E71.15
eyeball, neonate N02.CNhs11205.1551-44G81.22
eyeball, neonate N16.CNhs11188.777-19A21.55
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A81.32
forelimb, embryo E15.CNhs11007.437-20E71.11
forelimb, embryo E17.CNhs10598.1517-43C41.04
forelimb, embryo E18.CNhs11008.1520-43B50.62
gonad, embryo E13.CNhs11044.1564-45I60.40
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.28
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.35
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.57
heart, neonate N20.CNhs11127.821-26I60.29
heart, neonate N25.CNhs11196.1351-25D30.44
heart, neonate N30.CNhs11202.1390-42D21.21
hippocampus, adult.CNhs10478.13-16E811.78
hippocampus, neonate N00.CNhs11228.627-43G11.34
intestinal mucosa, adult.CNhs10506.860-29I37.27
intestine, adult.CNhs10496.178-9A30.53
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.52
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.95
intestine, neonate N01.CNhs11192.1322-23E90.49
intestine, neonate N06.CNhs11102.688-20B81.01
intestine, neonate N07.CNhs11095.720-20F20.40
intestine, neonate N10.CNhs11098.755-23A50.78
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E31.51
intestine, neonate N30.CNhs11131.1384-42G14.18
kidney, embryo E14.CNhs10606.411-4I90.57
kidney, embryo E15.CNhs10997.434-16F80.34
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I20.61
kidney, embryo E18.CNhs11001.1288-20C70.39
kidney, neonate N00.CNhs11214.646-21G70.63
kidney, neonate N10.CNhs11206.758-6D51.08
kidney, neonate N20.CNhs11113.832-19I10.89
kidney, neonate N25.CNhs11122.1353-25F30.94
kidney, neonate N30.CNhs11203.1385-42H10.62
liver, adult pregnant day01.CNhs10466.508-5B24.45
liver, embryo E12.CNhs10601.355-15F80.67
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.67
liver, embryo E15.CNhs10520.433-16D70.41
liver, embryo E16.CNhs10523.462-17F50.72
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G41.73
liver, neonate N00.CNhs11117.641-24F41.62
liver, neonate N03.CNhs11123.1345-25G20.82
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H22.23
liver, neonate N10.CNhs11115.751-24B90.94
liver, neonate N20.CNhs11220.823-25A33.28
liver, neonate N25.CNhs11198.1368-26H11.44
liver, neonate N30.CNhs11106.1382-42D15.31
lung, adult.CNhs10474.28-22B17.21
lung, embryo E12.CNhs10522.354-16G20.38
lung, embryo E14.CNhs10604.404-26F80.33
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.67
lung, embryo E18.CNhs10583.1287-20I62.14
lung, neonate N00.CNhs11224.640-42C61.76
lung, neonate N06.CNhs11212.683-20E53.47
lung, neonate N07.CNhs11111.715-19A33.32
lung, neonate N10.CNhs11219.750-23E64.46
lung, neonate N20.CNhs11109.822-18A44.42
lung, neonate N25.CNhs11119.1359-25C77.60
lung, neonate N30.CNhs11133.1394-42H27.52
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A16.03
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.54
mammary gland, adult lactating day02.CNhs10480.595-22B60.98
mammary gland, adult pregnant day19.CNhs10476.588-5H21.10
medulla oblongata, adult.CNhs10477.17-12C24.50
medulla oblongata, neonate N30.CNhs11200.1396-42A33.63
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C21.26
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.95
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.43
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I91.61
ovary, adult.CNhs10507.91-2I72.27
ovary, embryo E18.CNhs11040.505-44H70.71
ovary, neonate N00.CNhs11217.1299-22I41.47
oviduct, adult pregnant day01.CNhs10500.988-6G64.29
pancreas, adult.CNhs10486.34-16E410.62
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.59
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D72.18
pancreas, neonate N02.CNhs11139.1539-43D81.07
pancreas, neonate N16.CNhs11136.787-43B61.58
pancreas, neonate N25.CNhs11094.1555-45E25.27
pancreas, neonate N30.CNhs11182.1548-44H56.19
pituitary gland, adult.CNhs10493.21-1G85.79
pituitary gland, embryo E12.CNhs11018.346-16E60.54
pituitary gland, embryo E13.CNhs11009.370-44C70.13
pituitary gland, embryo E14.CNhs11037.398-44A51.71
pituitary gland, embryo E15.CNhs10592.427-16B91.42
pituitary gland, embryo E16.CNhs11036.449-43F61.96
pituitary gland, embryo E17.CNhs11039.1265-44F52.30
pituitary gland, neonate N00.CNhs11190.1308-22E90.61
placenta, adult pregnant day10.CNhs10472.539-13I70.70
placenta, adult pregnant day17.CNhs10464.577-18G32.33
prostate, adult.CNhs10470.859-1F83.53
skin, adult.CNhs10492.30-1C32.31
skin, neonate N00.CNhs11124.650-25G40.65
skin, neonate N03.CNhs11215.662-22H31.27
skin, neonate N06.CNhs11097.693-20I50.84
skin, neonate N10.CNhs11108.762-6C40.98
small intestine, neonate N16.CNhs11114.790-21I11.75
spinal cord, adult.CNhs10505.24-13C93.52
spleen, adult.CNhs10465.25-2G20.85
spleen, embryo E16.CNhs11035.461-43C10.41
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H10.55
spleen, neonate N25.CNhs11099.1354-25G30.92
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.17
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.14
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.41
stomach, adult.CNhs10503.33-1H61.91
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.41
stomach, embryo E16.CNhs11022.459-17D40.86
stomach, embryo E17.CNhs11006.1035-18D50.84
stomach, embryo E18.CNhs10999.1286-20C60.66
stomach, neonate N03.CNhs11193.1340-24B81.21
stomach, neonate N07.CNhs11210.718-18A91.82
stomach, neonate N25.CNhs11104.1355-25E42.36
stomach, neonate N30.CNhs11134.1386-42I10.78
submandibular gland, adult.CNhs10469.59-29C16.83
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.30
testis, embryo E15.CNhs11034.443-27C51.32
testis, embryo E16.CNhs11033.470-26G52.92
testis, embryo E17.CNhs11029.486-18I52.07
testis, embryo E18.CNhs11027.503-18G52.87
testis, neonate N00.CNhs11189.1300-22B73.76
testis, neonate N07.CNhs11222.726-26I42.34
testis, neonate N10.CNhs11204.763-44D92.62
testis, neonate N20.CNhs11110.839-18H31.21
testis, neonate N30.CNhs11130.1391-42E20.86
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.30
thymus, neonate N06.CNhs11197.681-26C40.10
thymus, neonate N07.CNhs11211.713-19D30.15
thymus, neonate N10.CNhs11194.748-24E40.20
thymus, neonate N20.CNhs11186.820-7A20.29
thymus, neonate N25.CNhs11125.1362-25G70.10
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B41.13
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E44.25
uterus, adult pregnant day19.CNhs10497.590-15F50.94
uterus, adult.CNhs10509.92-27E54.03
vagina, adult.CNhs10502.89-27D53.00
vesicular gland, adult.CNhs10491.51-27F87.02
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A16.78
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A211.97
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A312.03
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D710.31
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A417.81
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A517.37
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A66.75
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A713.96
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A816.77
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A912.94
whole body, embryo E11.CNhs11014.324-5I80.21
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H20.85
whole body, embryo E14.5.CNhs10578.420-27D21.46
whole body, embryo E14.CNhs10519.395-14B11.05
whole body, embryo E16.CNhs10514.453-14F21.29
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.56
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.21
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.52
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.52
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.94
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G52.25
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.15
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.55
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.74
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.74
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.47
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.37
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.06
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.31
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.04
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.69
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.58
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.49
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G52.37
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.18
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.23
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.08
whole body, embryo E17.5.CNhs10513.490-9F90.77
whole body, embryo E17.CNhs10517.475-3I51.75
whole body, embryo E18.CNhs10516.493-3B31.17
whole body, neonate N00.CNhs10525.657-19C21.29
whole body, neonate N01.CNhs10576.659-23C62.10
whole body, neonate N06.CNhs10515.692-21D11.32
whole body, neonate N10.CNhs10518.761-6B41.16





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
adult organism1.30e-1051
occipital lobe5.46e-0910
visual cortex5.46e-0910
neocortex5.46e-0910
brain4.17e-0847
future brain4.17e-0847
regional part of brain6.09e-0846
regional part of nervous system1.72e-0754
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chrX:159081478..159081505,-&oldid=4315108"