FFCP PHASE1:Mm9::chr8:22042143..22042150,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=100041654,100504014 | |EntrezGene=100041654,100504014 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=445 | |||
|TSSclassifier=NA | |||
|UniProt=E9Q8Z3 | |UniProt=E9Q8Z3 | ||
|association_with_transcript=-8bp_to_ENSMUST00000122025_5end | |association_with_transcript=-8bp_to_ENSMUST00000122025_5end | ||
|cluster_id=chr8:22042143..22042150,- | |||
|description=CAGE_peak_1_at_Gm15056_5end,CAGE_peak_1_at_LOC100504014_5end | |description=CAGE_peak_1_at_Gm15056_5end,CAGE_peak_1_at_LOC100504014_5end | ||
|id=chr8:22042143..22042150,- | |id=chr8:22042143..22042150,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0000192,8.02e-16,3;CL:0000359,8.02e-16,3;CL:0002539,8.02e-16,3;CL:0000514,8.02e-16,3;CL:0000680,1.29e-08,6;CL:0000187,1.29e-08,6;CL:0000056,1.29e-08,6;CL:0000222,1.41e-07,7 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000029!1.38e-07!1;UBERON:0001097!1.38e-07!1;UBERON:0003968!1.38e-07!1;UBERON:0008785!1.38e-07!1;UBERON:0001467!1.38e-07!1;UBERON:0001421!1.38e-07!1;UBERON:0002193!4.47e-07!48;UBERON:0004177!6.74e-07!29 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000029,7.47e-44,1;UBERON:0001097,7.47e-44,1;UBERON:0003968,7.47e-44,1;UBERON:0001467,7.47e-44,1;UBERON:0001135,8.02e-16,3;UBERON:0004237,8.02e-16,3;UBERON:0004695,8.02e-16,3;UBERON:0002111,8.02e-16,3;UBERON:0004178,8.02e-16,3;UBERON:0002465,1.12e-15,3;UBERON:0000947,3.12e-12,4;UBERON:0001637,3.12e-12,4;UBERON:0004573,3.12e-12,4;UBERON:0003509,3.12e-12,4;UBERON:0004571,3.12e-12,4;UBERON:0010191,3.12e-12,4;UBERON:0004572,3.12e-12,4;UBERON:0000055,4.56e-10,5;UBERON:0007500,4.56e-10,5;UBERON:0001981,4.56e-10,5;UBERON:0002049,4.56e-10,5;UBERON:0007798,4.56e-10,5;UBERON:0004537,4.56e-10,5;UBERON:0006965,4.56e-10,5;UBERON:0010708,9.78e-07,8 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.595303031057488,0,0,0,0,0,0,0,0,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.48738829107195,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.11418387971906,1.29468941823586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144649058581512,0,0.54390568381871,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.341741761595705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198681354781265,0,0.147689527174577,0.100966449948148,0,0,0.194915761479505,0.0962118416403295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.595303031057488,0,0,0,0,0,0,0,0,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.48738829107195,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.11418387971906,1.29468941823586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144649058581512,0,0.54390568381871,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.341741761595705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198681354781265,0,0.147689527174577,0.100966449948148,0,0,0.194915761479505,0.0962118416403295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p1@Gm15056,p1@LOC100504014 | |short_description=p1@Gm15056,p1@LOC100504014 | ||
}} | }} |
Latest revision as of 19:58, 1 October 2015
Short description: | p1@Gm15056, p1@LOC100504014 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Gm15056_5end, CAGE_peak_1_at_LOC100504014_5end |
Coexpression cluster: | MCL_coexpression_mm9:445 |
Association with transcript: | -8bp_to_ENSMUST00000122025_5end |
EntrezGene: | 100041654,100504014 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell | 8.02e-16 | 3 |
vascular associated smooth muscle cell | 8.02e-16 | 3 |
aortic smooth muscle cell | 8.02e-16 | 3 |
smooth muscle myoblast | 8.02e-16 | 3 |
muscle precursor cell | 1.29e-08 | 6 |
muscle cell | 1.29e-08 | 6 |
myoblast | 1.29e-08 | 6 |
mesodermal cell | 1.41e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
lymph node | 7.47e-44 | 1 |
axillary lymph node | 7.47e-44 | 1 |
peripheral lymph node | 7.47e-44 | 1 |
shoulder | 7.47e-44 | 1 |
smooth muscle tissue | 8.02e-16 | 3 |
blood vessel smooth muscle | 8.02e-16 | 3 |
arterial system smooth muscle | 8.02e-16 | 3 |
artery smooth muscle tissue | 8.02e-16 | 3 |
aorta smooth muscle tissue | 8.02e-16 | 3 |
lymphoid system | 1.12e-15 | 3 |
aorta | 3.12e-12 | 4 |
artery | 3.12e-12 | 4 |
systemic artery | 3.12e-12 | 4 |
arterial blood vessel | 3.12e-12 | 4 |
systemic arterial system | 3.12e-12 | 4 |
aortic system | 3.12e-12 | 4 |
arterial system | 3.12e-12 | 4 |
vessel | 4.56e-10 | 5 |
epithelial tube open at both ends | 4.56e-10 | 5 |
blood vessel | 4.56e-10 | 5 |
vasculature | 4.56e-10 | 5 |
vascular system | 4.56e-10 | 5 |
blood vasculature | 4.56e-10 | 5 |
vascular cord | 4.56e-10 | 5 |
pectoral complex | 9.78e-07 | 8 |