FFCP PHASE1:Mm9::chr8:22389392..22389399,+: Difference between revisions
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|id=chr8:22389392..22389399,+
|short_description=p1@Gm15292
|description=CAGE_peak_1_at_Gm15292_5end
|association_with_transcript=-33bp_to_ENSMUST00000098895_5end
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=100041787 | |EntrezGene=100041787 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1008 | |||
|TSSclassifier=NA | |||
|UniProt=D3Z1V6 | |UniProt=D3Z1V6 | ||
|association_with_transcript=-33bp_to_ENSMUST00000098895_5end | |||
|cluster_id=chr8:22389392..22389399,+ | |||
|description=CAGE_peak_1_at_Gm15292_5end | |||
|id=chr8:22389392..22389399,+ | |||
|ontology_enrichment_celltype=CL:0002563!9.64e-25!9;CL:0002251!9.64e-25!9;CL:0000239!4.51e-15!6;CL:0000677!4.51e-15!6;CL:0000212!4.51e-15!6;CL:0000584!4.51e-15!6;CL:0002076!1.99e-14!15;CL:0000066!4.49e-13!25;CL:0000075!6.75e-13!7;CL:0002250!1.96e-11!3;CL:0000223!1.50e-10!20 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,3.58e-12,9;CL:0002251,3.58e-12,9;CL:0000066,5.57e-08,25;CL:0000239,3.07e-07,6;CL:0000677,3.07e-07,6;CL:0000584,3.07e-07,6;CL:0002076,3.11e-07,15;CL:0000682,6.41e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!9.21e-40!15;UBERON:0001242!8.75e-33!13;UBERON:0000060!8.75e-33!13;UBERON:0001262!8.75e-33!13;UBERON:0004786!8.75e-33!13;UBERON:0000160!2.87e-25!43;UBERON:0003350!9.64e-25!9;UBERON:0004808!9.64e-25!9;UBERON:0001277!9.64e-25!9;UBERON:0004923!5.45e-24!24;UBERON:0000485!4.66e-20!11;UBERON:0005409!1.56e-17!59;UBERON:0000331!1.37e-12!3;UBERON:0002116!1.37e-12!3;UBERON:0001204!1.37e-12!3;UBERON:0001168!1.37e-12!3;UBERON:0001962!1.38e-08!2;UBERON:0001961!1.38e-08!2;UBERON:0001744!1.38e-08!2;UBERON:0001007!2.64e-08!128;UBERON:0001555!2.64e-08!128;UBERON:0007026!2.64e-08!128;UBERON:0004119!4.04e-08!130;UBERON:0000925!4.04e-08!130;UBERON:0006595!4.04e-08!130 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.50e-30,31;UBERON:0000344,1.78e-28,15;UBERON:0001242,3.34e-21,13;UBERON:0001262,3.34e-21,13;UBERON:0004786,3.34e-21,13;UBERON:0005409,3.31e-19,47;UBERON:0002108,9.25e-19,4;UBERON:0004923,2.95e-17,24;UBERON:0000331,1.30e-14,3;UBERON:0002116,1.30e-14,3;UBERON:0001204,1.30e-14,3;UBERON:0001168,1.30e-14,3;UBERON:0003350,3.58e-12,9;UBERON:0004808,3.58e-12,9;UBERON:0001277,3.58e-12,9;UBERON:0000485,6.23e-10,11;UBERON:0001962,7.03e-10,2;UBERON:0001961,7.03e-10,2;UBERON:0001744,7.03e-10,2;UBERON:0001007,1.43e-08,116;UBERON:0001555,1.43e-08,116;UBERON:0007026,1.43e-08,116;UBERON:0004119,2.23e-08,118;UBERON:0000925,2.23e-08,118;UBERON:0006595,2.23e-08,118;UBERON:0002465,7.34e-07,3 | |||
|phase1_expression=0,0,0.454999239389536,0.90739263392049,2.00358291978539,3.69334398206158,6.54115393667472,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.99981056983517,3.44113921600755,0,6.46142994238612,2.80112602491656,13.3016393619462,9.07308467135751,2.88249663851896,0,0,0,0.577703239502549,4.3221007793208,1.63335485009895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.983110940922263,0,0,0,0,0,0,0,0,0,0,1.25602267690966,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.860165643767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.08236303326152,0,0,0,0,0,0,2.37264530772256,0,0,0,0,3.59527763461689,4.32276099749388,2.78797782556114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.78925087618806,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0.454999239389536,0.90739263392049,2.00358291978539,3.69334398206158,6.54115393667472,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.99981056983517,3.44113921600755,0,6.46142994238612,2.80112602491656,13.3016393619462,9.07308467135751,2.88249663851896,0,0,0,0.577703239502549,4.3221007793208,1.63335485009895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.983110940922263,0,0,0,0,0,0,0,0,0,0,1.25602267690966,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.860165643767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.08236303326152,0,0,0,0,0,0,2.37264530772256,0,0,0,0,3.59527763461689,4.32276099749388,2.78797782556114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.78925087618806,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p1@Gm15292 | |||
}} | }} |
Latest revision as of 20:00, 1 October 2015
Short description: | p1@Gm15292 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Gm15292_5end |
Coexpression cluster: | MCL_coexpression_mm9:1008 |
Association with transcript: | -33bp_to_ENSMUST00000098895_5end |
EntrezGene: | Gm15292 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 3.58e-12 | 9 |
epithelial cell of alimentary canal | 3.58e-12 | 9 |
epithelial cell | 5.57e-08 | 25 |
brush border epithelial cell | 3.07e-07 | 6 |
gut absorptive cell | 3.07e-07 | 6 |
enterocyte | 3.07e-07 | 6 |
endo-epithelial cell | 3.11e-07 | 15 |
M cell of gut | 6.41e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
intestine | 2.50e-30 | 31 |
mucosa | 1.78e-28 | 15 |
intestinal mucosa | 3.34e-21 | 13 |
wall of intestine | 3.34e-21 | 13 |
gastrointestinal system mucosa | 3.34e-21 | 13 |
gastrointestinal system | 3.31e-19 | 47 |
small intestine | 9.25e-19 | 4 |
organ component layer | 2.95e-17 | 24 |
ileal mucosa | 1.30e-14 | 3 |
ileum | 1.30e-14 | 3 |
mucosa of small intestine | 1.30e-14 | 3 |
wall of small intestine | 1.30e-14 | 3 |
epithelium of mucosa | 3.58e-12 | 9 |
gastrointestinal system epithelium | 3.58e-12 | 9 |
intestinal epithelium | 3.58e-12 | 9 |
simple columnar epithelium | 6.23e-10 | 11 |
gut-associated lymphoid tissue | 7.03e-10 | 2 |
mucosa-associated lymphoid tissue | 7.03e-10 | 2 |
lymphoid tissue | 7.03e-10 | 2 |
digestive system | 1.43e-08 | 116 |
digestive tract | 1.43e-08 | 116 |
primitive gut | 1.43e-08 | 116 |
endoderm-derived structure | 2.23e-08 | 118 |
endoderm | 2.23e-08 | 118 |
presumptive endoderm | 2.23e-08 | 118 |
lymphoid system | 7.34e-07 | 3 |