FFCP PHASE1:Mm9::chr13:61037911..61037930,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr13:61037911..61037930,-
|short_description=p1@Ctla2a
|description=CAGE_peak_1_at_Ctla2a_5end
|association_with_transcript=0bp_to_NM_001145799,uc007qvy.2_5end...") |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=13024 | |EntrezGene=13024 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=106 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_NM_001145799,uc007qvy.2_5end | |||
|cluster_id=chr13:61037911..61037930,- | |||
|description=CAGE_peak_1_at_Ctla2a_5end | |||
|id=chr13:61037911..61037930,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004872!1.16e-15!33;UBERON:0004535!5.84e-11!23;UBERON:0001009!5.84e-11!23;UBERON:0000926!2.71e-10!193;UBERON:0004120!2.71e-10!193;UBERON:0006603!2.71e-10!193;UBERON:0007100!1.88e-09!18;UBERON:0000948!1.88e-09!18;UBERON:0005498!1.88e-09!18;UBERON:0004140!1.88e-09!18;UBERON:0009881!1.88e-09!18;UBERON:0004141!1.88e-09!18;UBERON:0003084!1.88e-09!18;UBERON:0007005!1.88e-09!18;UBERON:0004139!1.88e-09!18;UBERON:0004291!1.88e-09!18;UBERON:0003914!4.35e-08!47;UBERON:0003081!4.88e-08!88;UBERON:0002048!1.87e-07!14;UBERON:0000117!1.87e-07!14;UBERON:0000171!1.87e-07!14;UBERON:0000170!1.87e-07!14;UBERON:0005597!1.87e-07!14;UBERON:0000118!1.87e-07!14;UBERON:0005153!2.27e-07!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004872,1.11e-15,33;UBERON:0004535,5.67e-11,23;UBERON:0001009,5.67e-11,23;UBERON:0007100,1.83e-09,18;UBERON:0000948,1.83e-09,18;UBERON:0005498,1.83e-09,18;UBERON:0004140,1.83e-09,18;UBERON:0009881,1.83e-09,18;UBERON:0004141,1.83e-09,18;UBERON:0003084,1.83e-09,18;UBERON:0007005,1.83e-09,18;UBERON:0004139,1.83e-09,18;UBERON:0004291,1.83e-09,18;UBERON:0003914,5.23e-08,47;UBERON:0003081,6.83e-08,87;UBERON:0002048,1.84e-07,14;UBERON:0000117,1.84e-07,14;UBERON:0000171,1.84e-07,14;UBERON:0000170,1.84e-07,14;UBERON:0005597,1.84e-07,14;UBERON:0000118,1.84e-07,14;UBERON:0005153,2.23e-07,17;UBERON:0002100,4.72e-07,90;UBERON:0005157,8.27e-07,20 | |||
|phase1_expression=2.88267924788629,0,0,0,0,0,0,7.23090611272827,36.0419128708267,20.8317428426574,2.39705155515707,1.11681022593471,4.79362043807376,3.58423649917889,19.6534759471241,29.9663395736942,13.2916756844348,24.9215110633008,27.9713444555707,20.7950929381035,51.3661472512461,1.09220046320974,0,0.47997726838022,0.22940928106717,0,0,0,0,0,0.443461021310609,0,0,0,0,0,0,7.95210098400125,2.3440060335714,7.85285615960697,0.588231488031014,8.87959130445979,4.85510353031154,16.6183799727762,16.2203089951223,114.533173348889,0,0,0.219686182734472,0.972149495371417,1.1198913730029,0,1.8456086666351,13.7818806982155,59.8246962473586,112.165114111673,69.6276259051179,492.466848124957,1.01158230429799,0.528990979272033,1.26766280701236,0.338844532069132,0.889294796111139,4.04954872776629,5.93319817540185,2.8419204597844,2.69640099466564,1.92109152660777,2.38486108309499,1.08004750665353,3.15487442027073,5.42736870367227,7.50953039235486,2.20483438586917,0.958454710182364,0,2.20231761998777,6.12899222808901,5.22262213071228,1.18697658957174,1.00636407962651,2.08365348222704,7.81712397203867,16.8828783009504,8.09830713217094,8.2496003932627,9.11178757114259,2.79599168737951,42.9367516199154,19.9508918681914,159.425468785923,22.371020801516,1.3599426674155,0.539703191637817,1.29955283489534,0.448026887097336,24.8586623633201,13.9752864514007,20.7828803682295,11.6602059588412,0.14084341977668,14.115912515575,0,0,0,0,0,25.8055568165076,22.0097201100096,20.9303416081403,7.98032503124225,10.3518262626128,12.6838523490832,18.38816214742,15.6392980490487,12.1896593589785,679.538966301794,34.8484450176987,32.7305904221453,16.0149181447935,24.0717255121829,23.2740121504907,9.31958806090611,4.9772735491963,6.0739544975902,5.10914110417183,857.157400715354,574.706816291685,474.607298117897,5.84183493678809,9.15001205637253,5.15182843662744,4.69325664519146,8.69432554923124,4.1557608911912,11.1946471516753,20.8770695893148,38.0685330066885,9.35074206204597,5.6819301089348,4.94457683258274,5.51765050640335,4.50155324513373,7.83665052745718,8.300452896462,6.53379973452734,5.90320864726292,10.8655415710387,2.37124792226126,5.48407632486676,5.27853372491847,4.16471891612392,9.73165372289593,11.1440693287093,29.01528123352,8.95654200683219,66.7102527947573,47.6093628162223,26.9955324425813,22.5767092063697,25.7978665979206,32.7712951859047,27.4623893278844,28.3340493716262,39.4923808991688,35.8102274915628,43.4602910267383,55.2300069396712,44.7602791764667,52.6977559693896,45.3985333456792,56.5793951336036,50.7160766322327,79.047580649859,4.83666881697493,8.74689205223918,0.991256348951394,28.0317600663357,7.03851226766272,7.66381017139447,7.7320476793256,8.87407508342707,8.67274370994994,7.98947629672748,4.2707615539006,14.493508015713,13.3207660664143,15.9165177632921,11.307917052909,6.29173586057955,7.99710784536369,10.1562049359727,3.98302592001472,10.3966146474853,9.01661885384643,11.8117770150282,14.1585315632367,11.2918670023413,15.1135323726975,15.203845241899,12.55989822731,14.9310568345379,8.00422093135302,17.5187361001899,15.3316016188298,9.89393294493356,13.3887680116412,11.8176808278684,19.0969388836065,26.4680446454746,28.6979351391813,17.8464918572253,14.3768206527355,17.4906245404197,14.6657706363843,10.8608917517258,8.43167843552987,11.0962009913574,202.304743232432,14.0223644710159,17.2742875028547,26.9894686382549,32.8566347603903,33.5012514883632,57.1304738126433,117.275322362537,102.147573380812,133.100278478914,97.7457731870396,194.17802793815,162.84193789954,170.251941950439,0,2.17562273527484,25.5717421969899,28.4214848693874,6.26147300952389,7.3843362553088,4.91804836130026,37.1132262990428,11.6738041184015,14.055794794679,10.3403230911743,0.716906393857656,0.891194696329576,0.849229592366497,6.07216052512342,4.09158201075837,3.95287777946523,2.57057053137446,28.2460769564455,6.58842733568844,17.1031307321255,253.064168639869,5.30980553359851,9.71122544619926,8.46505959501303,12.8251454234011,5.02013217897314,13.2197113615889,18.0899805217755,23.9932261455154,19.9638531895444,12.009396801561,12.6502330289999,10.3135543248187,11.5749465956288,6.30213829109586,5.43306471887569,8.14480733120051,12.5911565886014,10.8804978737263,14.1512157717824,7.30715877875038,5274.48131043995,4521.97921672997,6.17479514553893,17.6428290647384,17.5996225098537,10.9769523369244,8.23669173621642,7.55048138827282,8.16146342563582,8.71498919449395,46.1351378154202,25.3855847594764,54.2619965193255,47.6572196221868,29.2525647322994,35.9181731934241,3584.33515328043,3345.11961344007,3169.20179928305,11.4560474161814,3.79603192297362,7.5228202836934,9.28845931067491,10.4544148007234,6.76923947613151,9.30563990055263,13.0592460046031,10.9937495633292,16.8499465279331,8.07741107013003,0,7.7748603942869,6.783798108741,6.41688921535357,9.42866711387437,13.685446164753,12.9092962510329,6.64042362704146,3.67007705489988,3.62376181239009,6.33666013767304,4.10814456816632,14.5962155008918,14.4822449602406,15.200736288402,8.59328139203911,10.3314304486258,9.85602686063745,9.00906115764921,9.38987984517773,6.32516495236499,5.94874492307359,6.43222012882366,7.5045236479457,8.99952146798081,10.4295976462997,1.10992976687032,0.269141569828427,0.503653849092235,16.8074946808006,16420.3397772239,206.96133542201,198.290750648136,20.0628841614145,18.0720589637461,16.1113832777512,10.3121192419091,20.9660882459299,6.16574267793578,3.7769694869485,7.42524750254986,6.30449684513909,5.89085131679466,5.69536342927002,1.66059756134683,3.59122386060928,7.68301225893604,11.6691224192781,1.46729213839588,5.51530525350042,16.6685045851211,16.2767695218726,12.194929964489,17.436107611702,11.9135270948413,13.9583492625696,22.3803202853019,15.7501874915978,15.0480928663707,20.4806287251722,15.8761526544452,19.4838312668342,23.9009822465918,20.019053138278,21.9436321526666,20.0547660960051,18.3595866259437,20.6391911617906,17.1279072355902,18.4459845203855,17.7440133686589,24.4654831637194,15.75327720612,15.7119836064167,16.9648075917569,19.0113650984837,22.9169384175026,17.8177367363861,19.097754487133,4.74640098082097,23.1592292360954,19.7681369724434,19.8939865351597,22.0591419119515,27.3604046032097 | |phase1_expression=2.88267924788629,0,0,0,0,0,0,7.23090611272827,36.0419128708267,20.8317428426574,2.39705155515707,1.11681022593471,4.79362043807376,3.58423649917889,19.6534759471241,29.9663395736942,13.2916756844348,24.9215110633008,27.9713444555707,20.7950929381035,51.3661472512461,1.09220046320974,0,0.47997726838022,0.22940928106717,0,0,0,0,0,0.443461021310609,0,0,0,0,0,0,7.95210098400125,2.3440060335714,7.85285615960697,0.588231488031014,8.87959130445979,4.85510353031154,16.6183799727762,16.2203089951223,114.533173348889,0,0,0.219686182734472,0.972149495371417,1.1198913730029,0,1.8456086666351,13.7818806982155,59.8246962473586,112.165114111673,69.6276259051179,492.466848124957,1.01158230429799,0.528990979272033,1.26766280701236,0.338844532069132,0.889294796111139,4.04954872776629,5.93319817540185,2.8419204597844,2.69640099466564,1.92109152660777,2.38486108309499,1.08004750665353,3.15487442027073,5.42736870367227,7.50953039235486,2.20483438586917,0.958454710182364,0,2.20231761998777,6.12899222808901,5.22262213071228,1.18697658957174,1.00636407962651,2.08365348222704,7.81712397203867,16.8828783009504,8.09830713217094,8.2496003932627,9.11178757114259,2.79599168737951,42.9367516199154,19.9508918681914,159.425468785923,22.371020801516,1.3599426674155,0.539703191637817,1.29955283489534,0.448026887097336,24.8586623633201,13.9752864514007,20.7828803682295,11.6602059588412,0.14084341977668,14.115912515575,0,0,0,0,0,25.8055568165076,22.0097201100096,20.9303416081403,7.98032503124225,10.3518262626128,12.6838523490832,18.38816214742,15.6392980490487,12.1896593589785,679.538966301794,34.8484450176987,32.7305904221453,16.0149181447935,24.0717255121829,23.2740121504907,9.31958806090611,4.9772735491963,6.0739544975902,5.10914110417183,857.157400715354,574.706816291685,474.607298117897,5.84183493678809,9.15001205637253,5.15182843662744,4.69325664519146,8.69432554923124,4.1557608911912,11.1946471516753,20.8770695893148,38.0685330066885,9.35074206204597,5.6819301089348,4.94457683258274,5.51765050640335,4.50155324513373,7.83665052745718,8.300452896462,6.53379973452734,5.90320864726292,10.8655415710387,2.37124792226126,5.48407632486676,5.27853372491847,4.16471891612392,9.73165372289593,11.1440693287093,29.01528123352,8.95654200683219,66.7102527947573,47.6093628162223,26.9955324425813,22.5767092063697,25.7978665979206,32.7712951859047,27.4623893278844,28.3340493716262,39.4923808991688,35.8102274915628,43.4602910267383,55.2300069396712,44.7602791764667,52.6977559693896,45.3985333456792,56.5793951336036,50.7160766322327,79.047580649859,4.83666881697493,8.74689205223918,0.991256348951394,28.0317600663357,7.03851226766272,7.66381017139447,7.7320476793256,8.87407508342707,8.67274370994994,7.98947629672748,4.2707615539006,14.493508015713,13.3207660664143,15.9165177632921,11.307917052909,6.29173586057955,7.99710784536369,10.1562049359727,3.98302592001472,10.3966146474853,9.01661885384643,11.8117770150282,14.1585315632367,11.2918670023413,15.1135323726975,15.203845241899,12.55989822731,14.9310568345379,8.00422093135302,17.5187361001899,15.3316016188298,9.89393294493356,13.3887680116412,11.8176808278684,19.0969388836065,26.4680446454746,28.6979351391813,17.8464918572253,14.3768206527355,17.4906245404197,14.6657706363843,10.8608917517258,8.43167843552987,11.0962009913574,202.304743232432,14.0223644710159,17.2742875028547,26.9894686382549,32.8566347603903,33.5012514883632,57.1304738126433,117.275322362537,102.147573380812,133.100278478914,97.7457731870396,194.17802793815,162.84193789954,170.251941950439,0,2.17562273527484,25.5717421969899,28.4214848693874,6.26147300952389,7.3843362553088,4.91804836130026,37.1132262990428,11.6738041184015,14.055794794679,10.3403230911743,0.716906393857656,0.891194696329576,0.849229592366497,6.07216052512342,4.09158201075837,3.95287777946523,2.57057053137446,28.2460769564455,6.58842733568844,17.1031307321255,253.064168639869,5.30980553359851,9.71122544619926,8.46505959501303,12.8251454234011,5.02013217897314,13.2197113615889,18.0899805217755,23.9932261455154,19.9638531895444,12.009396801561,12.6502330289999,10.3135543248187,11.5749465956288,6.30213829109586,5.43306471887569,8.14480733120051,12.5911565886014,10.8804978737263,14.1512157717824,7.30715877875038,5274.48131043995,4521.97921672997,6.17479514553893,17.6428290647384,17.5996225098537,10.9769523369244,8.23669173621642,7.55048138827282,8.16146342563582,8.71498919449395,46.1351378154202,25.3855847594764,54.2619965193255,47.6572196221868,29.2525647322994,35.9181731934241,3584.33515328043,3345.11961344007,3169.20179928305,11.4560474161814,3.79603192297362,7.5228202836934,9.28845931067491,10.4544148007234,6.76923947613151,9.30563990055263,13.0592460046031,10.9937495633292,16.8499465279331,8.07741107013003,0,7.7748603942869,6.783798108741,6.41688921535357,9.42866711387437,13.685446164753,12.9092962510329,6.64042362704146,3.67007705489988,3.62376181239009,6.33666013767304,4.10814456816632,14.5962155008918,14.4822449602406,15.200736288402,8.59328139203911,10.3314304486258,9.85602686063745,9.00906115764921,9.38987984517773,6.32516495236499,5.94874492307359,6.43222012882366,7.5045236479457,8.99952146798081,10.4295976462997,1.10992976687032,0.269141569828427,0.503653849092235,16.8074946808006,16420.3397772239,206.96133542201,198.290750648136,20.0628841614145,18.0720589637461,16.1113832777512,10.3121192419091,20.9660882459299,6.16574267793578,3.7769694869485,7.42524750254986,6.30449684513909,5.89085131679466,5.69536342927002,1.66059756134683,3.59122386060928,7.68301225893604,11.6691224192781,1.46729213839588,5.51530525350042,16.6685045851211,16.2767695218726,12.194929964489,17.436107611702,11.9135270948413,13.9583492625696,22.3803202853019,15.7501874915978,15.0480928663707,20.4806287251722,15.8761526544452,19.4838312668342,23.9009822465918,20.019053138278,21.9436321526666,20.0547660960051,18.3595866259437,20.6391911617906,17.1279072355902,18.4459845203855,17.7440133686589,24.4654831637194,15.75327720612,15.7119836064167,16.9648075917569,19.0113650984837,22.9169384175026,17.8177367363861,19.097754487133,4.74640098082097,23.1592292360954,19.7681369724434,19.8939865351597,22.0591419119515,27.3604046032097 | ||
|short_description=p1@Ctla2a | |||
}} | }} |
Latest revision as of 20:31, 1 October 2015
Short description: | p1@Ctla2a |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Ctla2a_5end |
Coexpression cluster: | MCL_coexpression_mm9:106 |
Association with transcript: | 0bp_to_NM_001145799, uc007qvy.2_5end |
EntrezGene: | Ctla2a |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
splanchnic layer of lateral plate mesoderm | 1.11e-15 | 33 |
cardiovascular system | 5.67e-11 | 23 |
circulatory system | 5.67e-11 | 23 |
primary circulatory organ | 1.83e-09 | 18 |
heart | 1.83e-09 | 18 |
primitive heart tube | 1.83e-09 | 18 |
primary heart field | 1.83e-09 | 18 |
anterior lateral plate mesoderm | 1.83e-09 | 18 |
heart tube | 1.83e-09 | 18 |
heart primordium | 1.83e-09 | 18 |
cardiac mesoderm | 1.83e-09 | 18 |
cardiogenic plate | 1.83e-09 | 18 |
heart rudiment | 1.83e-09 | 18 |
epithelial tube | 5.23e-08 | 47 |
lateral plate mesoderm | 6.83e-08 | 87 |
lung | 1.84e-07 | 14 |
respiratory tube | 1.84e-07 | 14 |
respiration organ | 1.84e-07 | 14 |
pair of lungs | 1.84e-07 | 14 |
lung primordium | 1.84e-07 | 14 |
lung bud | 1.84e-07 | 14 |
epithelial bud | 2.23e-07 | 17 |
trunk | 4.72e-07 | 90 |
epithelial fold | 8.27e-07 | 20 |