FFCP PHASE1:Mm9::chr19:10917021..10917054,+: Difference between revisions
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{{FFCP|EntrezGene=65221|HGNC=|MCL_coexpression_id=38|UniProt=Q8BPX9|association_with_transcript=0bp_to_ENSMUST00000025646,ENSMUST00000131010,NM_023044,uc008gra.2,uc008grb.1_5end|description=CAGE_peak_1_at_Slc15a3_5end|id=chr19:10917021..10917054,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002405!4.50e-14!70;UBERON:0000926!8.49e-10!193;UBERON:0004120!8.49e-10!193;UBERON:0006603!8.49e-10!193;UBERON:0002193!3.15e-08!48;UBERON:0009569!1.77e-07!66;UBERON:0002390!1.92e-07!45;UBERON:0003061!1.92e-07!45;UBERON:0005057!2.12e-07!51;UBERON:0002371!2.33e-07!16;UBERON:0001474!2.66e-07!22;UBERON:0004765!2.66e-07!22;UBERON:0001434!2.66e-07!22;UBERON:0002204!3.76e-07!32;UBERON:0005172!7.40e-07!49;UBERON:0005173!7.40e-07!49;UBERON:0002417!7.40e-07!49;UBERON:0000916!7.40e-07!49;UBERON:0003104!8.10e-07!131;UBERON:0009142!8.10e-07!131|ontology_enrichment_uberon_v019_2=UBERON:0002193,3.31e-10,48;UBERON:0002405,3.31e-10,48;UBERON:0002390,2.76e-09,45;UBERON:0003061,2.76e-09,45;UBERON:0001041,1.07e-08,80;UBERON:0002204,2.65e-08,32;UBERON:0002371,3.86e-08,16;UBERON:0001474,5.03e-08,22;UBERON:0004765,5.03e-08,22;UBERON:0001434,5.03e-08,22;UBERON:0002365,2.01e-07,25;UBERON:0002330,2.01e-07,25;UBERON:0002107,2.57e-07,22;UBERON:0007499,2.57e-07,22;UBERON:0006925,2.57e-07,22;UBERON:0009497,2.57e-07,22;UBERON:0000015,2.57e-07,22;UBERON:0002423,2.57e-07,22;UBERON:0006235,2.57e-07,22;UBERON:0008835,2.57e-07,22;UBERON:0003894,2.57e-07,22;UBERON:0004161,2.57e-07,22;UBERON:0008836,2.57e-07,22;UBERON:0009569,4.81e-07,66;UBERON:0005256,5.24e-07,45;UBERON:0001007,8.77e-07,116;UBERON:0001555,8.77e-07,116;UBERON:0007026,8.77e-07,116|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0.563154888606667,0.234064526321993,0.171217968225505,0.0797721589953364,0,0.0874204024189974,3.66420737997229,2.63217847606774,1.39912375625629,2.20823515750766,2.33094537129756,2.54633791078818,1.9559956734746,0.297872853602656,0,3.51983330145495,1.37645568640302,0,0,0.215471232685889,0.190023419456374,0,0.443461021310609,0,0,0,0,0,0,38.0863783970586,21.0960543021426,28.2702821745851,110.587519749831,84.6976401348473,79.6236978971092,0.125896817975577,0.101376931219515,0,0.782391344348039,0,0,0,0.139986421625363,0,4.02678254538567,1.45072428402269,1.00828139742739,1.54355661621568,5.15760191889762,1.03134418455488,0.202316460859598,0,0,0,0,186.27924147725,163.162949823551,186.145790115878,29.6604109413221,26.5110630671873,0.103689612308478,0.405017814995072,0.210324961351382,1.99955689082663,1.76694832761291,0.244981598429908,0.479227355091182,0,0,0.638436690425939,0.768032666281217,0.395658863190582,0,1.04182674111352,0.279182999001381,1.12552522006336,0.763991238884051,1.17851434189467,1.42371680799103,0.372798891650601,0.681535739998656,0.377857800533928,2.89864488701678,3.44169550792555,0.679971333707751,0,0.649776417447669,0,2.52799956237153,0,0,0,0.14084341977668,0,0,0,0,0,0,2.05530983494308,8.54495016035667,7.27366481417641,1.04091196059682,1.21786191324856,0.461230994512117,1.50722640552623,2.58695155698551,1.75933227861546,0.247194967734374,1.01219549843938,16.8076004870476,1.61766849947409,5.07935492458905,4.363877278217,0,0,0.41889341362691,4.85368404896324,2.03685711660064,1.19980546198682,2.54140454146129,0.748953197024114,0.915001205637253,0.628271760564322,0.869121600961382,1.27857728665165,0.83115217823824,1.62241263067758,1.52759045775474,3.73220911830279,0.758168275301024,2.10441855886474,0.520481771850815,0.229902104433473,0.540186389416048,0.60281927134286,0.476255494059295,0.640568601424249,0.562210347358373,0.258703370739016,0,0.378212160335639,0.175951124163949,0.657587197282725,0.278047249225598,1.39300866608867,1.23469281844766,0.398068533636986,2.1066395619397,1.54408744268829,3.9782889915383,0.207125772535502,0.234526059981096,1.2604344302271,0.473489471170421,1.57411385397923,1.54267112887378,0.465067889500816,1.3413670069981,1.86824547787471,1.6455984991348,0.820837320395476,0.810688095458557,1.02339991197733,4.17145219052996,1.20785776884335,0.210289948564127,0.823236899034275,0.991256348951394,2.64450566663544,0.426576501070468,0.696710015581316,1.28867461322093,0.403367049246685,1.55664630691409,1.52180500890047,2.84717436926707,1.31759163779209,1.75934646160189,3.38226002469956,2.9244613067868,1.79763881730844,4.32276099749388,4.97853183135918,0.379335801906163,0.913988100877831,0,0.610953983535943,0.775809948670503,0.561086559122548,0.69560190836683,0.885660887877613,2.98297582898612,0.370191491765402,6.22550516883013,2.00214126859313,5.30709286805648,5.39669069723649,5.68008339887808,5.54707467430559,4.83789118384698,13.8094145976389,13.943629502653,10.4333337011471,50.3188722845741,20.8398930694362,14.0416952901552,6.06189307073068,6.09951205974501,6.75420929908714,8.31389355749721,0.568474235311454,0.488894929326078,0.509235257325564,0.704070744865506,1.84256883185997,2.14239276797412,2.92700471786698,3.62560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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=65221 | |||
|HGNC= | |||
|MCL_coexpression_id=38 | |||
|TSSclassifier=NA | |||
|UniProt=Q8BPX9 | |||
|association_with_transcript=0bp_to_ENSMUST00000025646,ENSMUST00000131010,NM_023044,uc008gra.2,uc008grb.1_5end | |||
|cluster_id=chr19:10917021..10917054,+ | |||
|description=CAGE_peak_1_at_Slc15a3_5end | |||
|id=chr19:10917021..10917054,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002405!4.50e-14!70;UBERON:0000926!8.49e-10!193;UBERON:0004120!8.49e-10!193;UBERON:0006603!8.49e-10!193;UBERON:0002193!3.15e-08!48;UBERON:0009569!1.77e-07!66;UBERON:0002390!1.92e-07!45;UBERON:0003061!1.92e-07!45;UBERON:0005057!2.12e-07!51;UBERON:0002371!2.33e-07!16;UBERON:0001474!2.66e-07!22;UBERON:0004765!2.66e-07!22;UBERON:0001434!2.66e-07!22;UBERON:0002204!3.76e-07!32;UBERON:0005172!7.40e-07!49;UBERON:0005173!7.40e-07!49;UBERON:0002417!7.40e-07!49;UBERON:0000916!7.40e-07!49;UBERON:0003104!8.10e-07!131;UBERON:0009142!8.10e-07!131 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,3.31e-10,48;UBERON:0002405,3.31e-10,48;UBERON:0002390,2.76e-09,45;UBERON:0003061,2.76e-09,45;UBERON:0001041,1.07e-08,80;UBERON:0002204,2.65e-08,32;UBERON:0002371,3.86e-08,16;UBERON:0001474,5.03e-08,22;UBERON:0004765,5.03e-08,22;UBERON:0001434,5.03e-08,22;UBERON:0002365,2.01e-07,25;UBERON:0002330,2.01e-07,25;UBERON:0002107,2.57e-07,22;UBERON:0007499,2.57e-07,22;UBERON:0006925,2.57e-07,22;UBERON:0009497,2.57e-07,22;UBERON:0000015,2.57e-07,22;UBERON:0002423,2.57e-07,22;UBERON:0006235,2.57e-07,22;UBERON:0008835,2.57e-07,22;UBERON:0003894,2.57e-07,22;UBERON:0004161,2.57e-07,22;UBERON:0008836,2.57e-07,22;UBERON:0009569,4.81e-07,66;UBERON:0005256,5.24e-07,45;UBERON:0001007,8.77e-07,116;UBERON:0001555,8.77e-07,116;UBERON:0007026,8.77e-07,116 | |||
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| |||
|short_description=p1@Slc15a3 | |||
}} |
Latest revision as of 21:05, 1 October 2015
Short description: | p1@Slc15a3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Slc15a3_5end |
Coexpression cluster: | MCL_coexpression_mm9:38 |
Association with transcript: | 0bp_to_ENSMUST00000025646, ENSMUST00000131010, NM_023044, uc008gra.2, uc008grb.1_5end |
EntrezGene: | Slc15a3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 3.31e-10 | 48 |
immune system | 3.31e-10 | 48 |
hematopoietic system | 2.76e-09 | 45 |
blood island | 2.76e-09 | 45 |
foregut | 1.07e-08 | 80 |
musculoskeletal system | 2.65e-08 | 32 |
bone marrow | 3.86e-08 | 16 |
bone element | 5.03e-08 | 22 |
skeletal element | 5.03e-08 | 22 |
skeletal system | 5.03e-08 | 22 |
exocrine gland | 2.01e-07 | 25 |
exocrine system | 2.01e-07 | 25 |
liver | 2.57e-07 | 22 |
epithelial sac | 2.57e-07 | 22 |
digestive gland | 2.57e-07 | 22 |
epithelium of foregut-midgut junction | 2.57e-07 | 22 |
anatomical boundary | 2.57e-07 | 22 |
hepatobiliary system | 2.57e-07 | 22 |
foregut-midgut junction | 2.57e-07 | 22 |
hepatic diverticulum | 2.57e-07 | 22 |
liver primordium | 2.57e-07 | 22 |
septum transversum | 2.57e-07 | 22 |
liver bud | 2.57e-07 | 22 |
subdivision of trunk | 4.81e-07 | 66 |
trunk mesenchyme | 5.24e-07 | 45 |
digestive system | 8.77e-07 | 116 |
digestive tract | 8.77e-07 | 116 |
primitive gut | 8.77e-07 | 116 |