FFCP PHASE1:Mm9::chr18:60908262..60908348,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=15531 | |EntrezGene=15531 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=Q3UHN9 | |UniProt=Q3UHN9 | ||
|association_with_transcript=0bp_to_ENSMUST00000066785,uc008fau.1_5end | |association_with_transcript=0bp_to_ENSMUST00000066785,uc008fau.1_5end | ||
|cluster_id=chr18:60908262..60908348,- | |||
|description=CAGE_peak_1_at_Ndst1_5end | |description=CAGE_peak_1_at_Ndst1_5end | ||
|id=chr18:60908262..60908348,- | |id=chr18:60908262..60908348,- | ||
|ontology_enrichment_celltype=CL:0000221!5.62e-15!44;CL:0000133!5.62e-15!44;CL:0002319!2.21e-14!43;CL:0000055!3.11e-13!50;CL:0002321!2.11e-10!70;CL:0000220!2.11e-10!70;CL:0000540!7.78e-09!33;CL:0000047!7.78e-09!33;CL:0000031!7.78e-09!33;CL:0000404!7.78e-09!33;CL:0000393!7.44e-08!39;CL:0000211!7.44e-08!39;CL:0000333!2.92e-07!10;CL:0000095!2.92e-07!10;CL:0000243!2.92e-07!10;CL:0000123!2.92e-07!10;CL:0000125!2.92e-07!10;CL:0000030!2.92e-07!10;CL:0000339!2.92e-07!10 | |ontology_enrichment_celltype=CL:0000221!5.62e-15!44;CL:0000133!5.62e-15!44;CL:0002319!2.21e-14!43;CL:0000055!3.11e-13!50;CL:0002321!2.11e-10!70;CL:0000220!2.11e-10!70;CL:0000540!7.78e-09!33;CL:0000047!7.78e-09!33;CL:0000031!7.78e-09!33;CL:0000404!7.78e-09!33;CL:0000393!7.44e-08!39;CL:0000211!7.44e-08!39;CL:0000333!2.92e-07!10;CL:0000095!2.92e-07!10;CL:0000243!2.92e-07!10;CL:0000123!2.92e-07!10;CL:0000125!2.92e-07!10;CL:0000030!2.92e-07!10;CL:0000339!2.92e-07!10 | ||
|ontology_enrichment_celltype_v019_2=CL:0000221,5.62e-15,44;CL:0000133,5.62e-15,44;CL:0002319,2.21e-14,43;CL:0002321,2.11e-10,70;CL:0000540,7.77e-09,33;CL:0000047,7.77e-09,33;CL:0000031,7.77e-09,33;CL:0000404,7.77e-09,33;CL:0000393,7.44e-08,39;CL:0000211,7.44e-08,39;CL:0000333,2.92e-07,10;CL:0000095,2.92e-07,10;CL:0000243,2.92e-07,10;CL:0000123,2.92e-07,10;CL:0000125,2.92e-07,10;CL:0000030,2.92e-07,10;CL:0000339,2.92e-07,10 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!4.38e-11!102;UBERON:0000924!4.38e-11!102;UBERON:0006601!4.38e-11!102;UBERON:0000073!8.98e-10!75;UBERON:0001016!8.98e-10!75;UBERON:0001017!7.18e-09!73;UBERON:0005743!7.18e-09!73;UBERON:0000468!7.30e-09!333;UBERON:0000025!1.65e-08!114;UBERON:0004111!7.50e-08!122;UBERON:0000010!5.56e-07!11;UBERON:0000922!6.92e-07!328 | |ontology_enrichment_uberon=UBERON:0004121!4.38e-11!102;UBERON:0000924!4.38e-11!102;UBERON:0006601!4.38e-11!102;UBERON:0000073!8.98e-10!75;UBERON:0001016!8.98e-10!75;UBERON:0001017!7.18e-09!73;UBERON:0005743!7.18e-09!73;UBERON:0000468!7.30e-09!333;UBERON:0000025!1.65e-08!114;UBERON:0004111!7.50e-08!122;UBERON:0000010!5.56e-07!11;UBERON:0000922!6.92e-07!328 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,8.98e-10,75;UBERON:0004121,9.43e-10,95;UBERON:0000924,9.43e-10,95;UBERON:0006601,9.43e-10,95;UBERON:0001017,7.18e-09,73;UBERON:0000025,1.65e-08,114;UBERON:0000922,2.37e-08,320;UBERON:0004111,7.50e-08,122;UBERON:0010314,1.04e-07,92;UBERON:0000010,5.56e-07,11 | |||
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| ||
|short_description=p1@Ndst1 | |short_description=p1@Ndst1 | ||
}} | }} |
Latest revision as of 13:22, 1 October 2015
Short description: | p1@Ndst1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Ndst1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENSMUST00000066785, uc008fau.1_5end |
EntrezGene: | Ndst1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 5.62e-15 | 44 |
neurectodermal cell | 5.62e-15 | 44 |
neural cell | 2.21e-14 | 43 |
embryonic cell | 2.11e-10 | 70 |
neuron | 7.77e-09 | 33 |
neuronal stem cell | 7.77e-09 | 33 |
neuroblast | 7.77e-09 | 33 |
electrically signaling cell | 7.77e-09 | 33 |
electrically responsive cell | 7.44e-08 | 39 |
electrically active cell | 7.44e-08 | 39 |
migratory neural crest cell | 2.92e-07 | 10 |
neuron associated cell | 2.92e-07 | 10 |
glial cell (sensu Vertebrata) | 2.92e-07 | 10 |
neuron associated cell (sensu Vertebrata) | 2.92e-07 | 10 |
glial cell | 2.92e-07 | 10 |
glioblast | 2.92e-07 | 10 |
glioblast (sensu Vertebrata) | 2.92e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
nervous system | 8.98e-10 | 75 |
ectoderm-derived structure | 9.43e-10 | 95 |
ectoderm | 9.43e-10 | 95 |
presumptive ectoderm | 9.43e-10 | 95 |
central nervous system | 7.18e-09 | 73 |
tube | 1.65e-08 | 114 |
embryo | 2.37e-08 | 320 |
anatomical conduit | 7.50e-08 | 122 |
structure with developmental contribution from neural crest | 1.04e-07 | 92 |
peripheral nervous system | 5.56e-07 | 11 |