FFCP PHASE1:Mm9::chr8:77396650..77396662,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=71597 | |EntrezGene=71597 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=12 | |||
|TSSclassifier=NA | |||
|UniProt=A1A546 | |UniProt=A1A546 | ||
|association_with_transcript=32bp_to_ENSMUST00000034034_5end | |association_with_transcript=32bp_to_ENSMUST00000034034_5end | ||
|cluster_id=chr8:77396650..77396662,+ | |||
|description=CAGE_peak_4_at_Isx_5end | |description=CAGE_peak_4_at_Isx_5end | ||
|id=chr8:77396650..77396662,+ | |id=chr8:77396650..77396662,+ | ||
|ontology_enrichment_celltype=CL:0002563!5.84e-11!9;CL:0002251!5.84e-11!9;CL:0000239!3.96e-08!6;CL:0000677!3.96e-08!6;CL:0000212!3.96e-08!6;CL:0000584!3.96e-08!6;CL:0000075!9.12e-07!7 | |ontology_enrichment_celltype=CL:0002563!5.84e-11!9;CL:0002251!5.84e-11!9;CL:0000239!3.96e-08!6;CL:0000677!3.96e-08!6;CL:0000212!3.96e-08!6;CL:0000584!3.96e-08!6;CL:0000075!9.12e-07!7 | ||
|ontology_enrichment_celltype_v019_2=CL:0002563,1.74e-20,9;CL:0002251,1.74e-20,9;CL:0000239,8.73e-15,6;CL:0000677,8.73e-15,6;CL:0000584,8.73e-15,6;CL:0000075,1.44e-12,7;CL:0000066,1.00e-11,25;CL:0002076,1.30e-11,15;CL:0000682,2.54e-08,3;CL:0000223,2.72e-08,20;CL:0002250,2.75e-07,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!3.53e-25!43;UBERON:0005409!9.60e-25!59;UBERON:0000344!1.24e-17!15;UBERON:0001242!3.16e-15!13;UBERON:0000060!3.16e-15!13;UBERON:0001262!3.16e-15!13;UBERON:0004786!3.16e-15!13;UBERON:0003350!5.84e-11!9;UBERON:0004808!5.84e-11!9;UBERON:0001277!5.84e-11!9;UBERON:0004923!4.28e-09!24;UBERON:0000485!1.75e-08!11;UBERON:0001007!2.63e-08!128;UBERON:0001555!2.63e-08!128;UBERON:0007026!2.63e-08!128;UBERON:0004119!5.61e-08!130;UBERON:0000925!5.61e-08!130;UBERON:0006595!5.61e-08!130;UBERON:0004921!3.26e-07!126;UBERON:0004185!3.26e-07!126 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,3.96e-69,31;UBERON:0005409,2.26e-46,47;UBERON:0000344,5.59e-34,15;UBERON:0001242,4.17e-29,13;UBERON:0001262,4.17e-29,13;UBERON:0004786,4.17e-29,13;UBERON:0003350,1.74e-20,9;UBERON:0004808,1.74e-20,9;UBERON:0001277,1.74e-20,9;UBERON:0004923,6.69e-20,24;UBERON:0001007,1.70e-17,116;UBERON:0001555,1.70e-17,116;UBERON:0007026,1.70e-17,116;UBERON:0004119,4.46e-17,118;UBERON:0000925,4.46e-17,118;UBERON:0006595,4.46e-17,118;UBERON:0000485,1.89e-16,11;UBERON:0004921,4.41e-15,114;UBERON:0002108,7.53e-10,4;UBERON:0000331,1.54e-07,3;UBERON:0002116,1.54e-07,3;UBERON:0001204,1.54e-07,3;UBERON:0001168,1.54e-07,3 | |||
|phase1_expression=0,21.6364752736404,16.3799726180233,5.14189159221611,5.50985302940982,14.4376173844225,12.3814699515629,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.1592347021341,12.8469197397615,12.0588712464154,11.1998119001359,14.0056301245828,11.2113817479261,5.79669298447841,7.31710685162506,0,0,0,8.08784535303569,5.65197794218874,6.12508068787107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.91347103775248,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.72783522436244,0,0,15.5828803677241,0,0,0,0,0,0,0.173824320192276,0,0,0,0.101839363850316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154267112887378,0.232533944750408,0,0.116765342367169,0,0,0.0810688095458557,0,0,0,0,0,28.4160153366066,17.7181879664575,1.06644125267617,1.16118335930219,3.60828891701861,7.86565746031036,10.4517680607089,9.89173255785308,10.9141684155238,8.39964669092456,10.8074139784116,9.74886713001639,11.5028811400281,10.7858329038507,14.2651112917298,12.3467589417708,0,0,0,0,0,0,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162964976442026,0,0,0,0,0,0,0.221464689648775,0,0.163863314715738,0,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.302323556964751,0,0,0,2.32585463851399,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0603129249281559,0,0,13.699599321603,0,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0.203319467126849,0.86404272657441,0.209088296014469,0.436725127492355,0.134864346384821,0.165306911450672,0,6.09190374471426,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0.222246727801615,0.412070114477788,0.64183841918363,0,0.50695859978048,0.377252682772152,0.0936415074698824,0.512201219238954,0.229741875822453,0,0.695305955669133,0.578727661391115,0.412085900803307,0.588795680537589,0,0.532427418478012,0.715308569841963,0.726732083161643,0.188218760830661,0.507687647350059,0.365855945745545,0,0.679020569229309,0.561142271657738,0.355905054372522,0.394017929502254,0.409231043169689,0.464810523557898,0.192906610981141,0,0.701794825336225,0.429742108096597,0,0,0 | |phase1_expression=0,21.6364752736404,16.3799726180233,5.14189159221611,5.50985302940982,14.4376173844225,12.3814699515629,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.1592347021341,12.8469197397615,12.0588712464154,11.1998119001359,14.0056301245828,11.2113817479261,5.79669298447841,7.31710685162506,0,0,0,8.08784535303569,5.65197794218874,6.12508068787107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.91347103775248,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.72783522436244,0,0,15.5828803677241,0,0,0,0,0,0,0.173824320192276,0,0,0,0.101839363850316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154267112887378,0.232533944750408,0,0.116765342367169,0,0,0.0810688095458557,0,0,0,0,0,28.4160153366066,17.7181879664575,1.06644125267617,1.16118335930219,3.60828891701861,7.86565746031036,10.4517680607089,9.89173255785308,10.9141684155238,8.39964669092456,10.8074139784116,9.74886713001639,11.5028811400281,10.7858329038507,14.2651112917298,12.3467589417708,0,0,0,0,0,0,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162964976442026,0,0,0,0,0,0,0.221464689648775,0,0.163863314715738,0,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.302323556964751,0,0,0,2.32585463851399,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0603129249281559,0,0,13.699599321603,0,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0.203319467126849,0.86404272657441,0.209088296014469,0.436725127492355,0.134864346384821,0.165306911450672,0,6.09190374471426,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0.222246727801615,0.412070114477788,0.64183841918363,0,0.50695859978048,0.377252682772152,0.0936415074698824,0.512201219238954,0.229741875822453,0,0.695305955669133,0.578727661391115,0.412085900803307,0.588795680537589,0,0.532427418478012,0.715308569841963,0.726732083161643,0.188218760830661,0.507687647350059,0.365855945745545,0,0.679020569229309,0.561142271657738,0.355905054372522,0.394017929502254,0.409231043169689,0.464810523557898,0.192906610981141,0,0.701794825336225,0.429742108096597,0,0,0 | ||
|short_description=p4@Isx | |short_description=p4@Isx | ||
}} | }} |
Latest revision as of 19:12, 25 September 2015
Short description: | p4@Isx |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Isx_5end |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | 32bp_to_ENSMUST00000034034_5end |
EntrezGene: | Isx |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 1.74e-20 | 9 |
epithelial cell of alimentary canal | 1.74e-20 | 9 |
brush border epithelial cell | 8.73e-15 | 6 |
gut absorptive cell | 8.73e-15 | 6 |
enterocyte | 8.73e-15 | 6 |
columnar/cuboidal epithelial cell | 1.44e-12 | 7 |
epithelial cell | 1.00e-11 | 25 |
endo-epithelial cell | 1.30e-11 | 15 |
M cell of gut | 2.54e-08 | 3 |
endodermal cell | 2.72e-08 | 20 |
intestinal crypt stem cell | 2.75e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
intestine | 3.96e-69 | 31 |
gastrointestinal system | 2.26e-46 | 47 |
mucosa | 5.59e-34 | 15 |
intestinal mucosa | 4.17e-29 | 13 |
wall of intestine | 4.17e-29 | 13 |
gastrointestinal system mucosa | 4.17e-29 | 13 |
epithelium of mucosa | 1.74e-20 | 9 |
gastrointestinal system epithelium | 1.74e-20 | 9 |
intestinal epithelium | 1.74e-20 | 9 |
organ component layer | 6.69e-20 | 24 |
digestive system | 1.70e-17 | 116 |
digestive tract | 1.70e-17 | 116 |
primitive gut | 1.70e-17 | 116 |
endoderm-derived structure | 4.46e-17 | 118 |
endoderm | 4.46e-17 | 118 |
presumptive endoderm | 4.46e-17 | 118 |
simple columnar epithelium | 1.89e-16 | 11 |
subdivision of digestive tract | 4.41e-15 | 114 |
small intestine | 7.53e-10 | 4 |
ileal mucosa | 1.54e-07 | 3 |
ileum | 1.54e-07 | 3 |
mucosa of small intestine | 1.54e-07 | 3 |
wall of small intestine | 1.54e-07 | 3 |