FFCP PHASE1:Mm9::chr1:183215926..183215959,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=58 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:183215926..183215959,+ | |||
|description=CAGE_peak_at_chr1:183215926..183215959,+ | |description=CAGE_peak_at_chr1:183215926..183215959,+ | ||
|id=chr1:183215926..183215959,+ | |id=chr1:183215926..183215959,+ | ||
|ontology_enrichment_celltype=CL:0002563!2.95e-14!9;CL:0002251!2.95e-14!9;CL:0000239!1.73e-10!6;CL:0000677!1.73e-10!6;CL:0000212!1.73e-10!6;CL:0000584!1.73e-10!6;CL:0000075!7.98e-09!7;CL:0000066!1.18e-08!25;CL:0002076!1.19e-07!15 | |ontology_enrichment_celltype=CL:0002563!2.95e-14!9;CL:0002251!2.95e-14!9;CL:0000239!1.73e-10!6;CL:0000677!1.73e-10!6;CL:0000212!1.73e-10!6;CL:0000584!1.73e-10!6;CL:0000075!7.98e-09!7;CL:0000066!1.18e-08!25;CL:0002076!1.19e-07!15 | ||
|ontology_enrichment_celltype_v019_2=CL:0002563,1.47e-24,9;CL:0002251,1.47e-24,9;CL:0000239,7.57e-22,6;CL:0000677,7.57e-22,6;CL:0000584,7.57e-22,6;CL:0000075,1.18e-18,7;CL:0000066,5.18e-16,25;CL:0002076,2.72e-14,15;CL:0000682,1.36e-12,3;CL:0000223,1.96e-10,20 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!6.50e-24!43;UBERON:0000344!2.65e-23!15;UBERON:0001242!4.38e-20!13;UBERON:0000060!4.38e-20!13;UBERON:0001262!4.38e-20!13;UBERON:0004786!4.38e-20!13;UBERON:0005409!1.06e-17!59;UBERON:0004923!9.35e-15!24;UBERON:0003350!2.95e-14!9;UBERON:0004808!2.95e-14!9;UBERON:0001277!2.95e-14!9;UBERON:0000485!1.31e-13!11 | |ontology_enrichment_uberon=UBERON:0000160!6.50e-24!43;UBERON:0000344!2.65e-23!15;UBERON:0001242!4.38e-20!13;UBERON:0000060!4.38e-20!13;UBERON:0001262!4.38e-20!13;UBERON:0004786!4.38e-20!13;UBERON:0005409!1.06e-17!59;UBERON:0004923!9.35e-15!24;UBERON:0003350!2.95e-14!9;UBERON:0004808!2.95e-14!9;UBERON:0001277!2.95e-14!9;UBERON:0000485!1.31e-13!11 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,5.28e-45,15;UBERON:0001242,9.95e-38,13;UBERON:0001262,9.95e-38,13;UBERON:0004786,9.95e-38,13;UBERON:0004923,4.00e-31,24;UBERON:0000160,9.44e-30,31;UBERON:0003350,1.47e-24,9;UBERON:0004808,1.47e-24,9;UBERON:0001277,1.47e-24,9;UBERON:0000485,6.79e-20,11;UBERON:0005409,1.49e-18,47;UBERON:0002108,2.65e-14,4;UBERON:0000331,2.01e-11,3;UBERON:0002116,2.01e-11,3;UBERON:0001204,2.01e-11,3;UBERON:0001168,2.01e-11,3;UBERON:0001962,9.05e-09,2;UBERON:0001961,9.05e-09,2;UBERON:0001744,9.05e-09,2;UBERON:0001911,2.30e-08,2;UBERON:0000076,2.30e-08,2;UBERON:0005333,2.30e-08,2;UBERON:0008425,2.30e-08,2;UBERON:0005311,2.30e-08,2;UBERON:0001007,1.33e-07,116;UBERON:0001555,1.33e-07,116;UBERON:0007026,1.33e-07,116;UBERON:0004119,2.06e-07,118;UBERON:0000925,2.06e-07,118;UBERON:0006595,2.06e-07,118 | |||
|phase1_expression=0.320297694209588,14.6569671208532,23.6599604482559,2.11724947914781,2.00358291978539,10.0727563147134,11.6806320297763,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.3192271249275,20.4174260149781,17.2269589234506,24.5534337810673,23.9173068281337,6.65081968097309,2.77233142735924,6.65191531965914,0,0,0,1.44425809875637,0.664938581433969,1.02084678131185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.45673551887624,0,0,0,0,0,0,0,0,1.23597483867187,0,0,0.323533699894818,0,0,0,0,0,0.766371165625774,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278047249225598,0.696504333044333,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.97376904685418,0,0,0,0.257734922644187,0.201683524623343,0.444756087689741,0.190225626112559,1.42358718463353,0.494096864172033,1.50801125280162,0.994782360205754,1.36474860983384,0.898819408654221,2.37751854862164,0.796565093017469,0,0,0,0,0,0,0,0.147610147979602,0.156998727841375,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.83528546038072,9.65778612066564,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.516856586336442,0.363533729477506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120625849856312,0,0,1.1659233465194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.269728692769641,0,0,0.518459893167171,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0.19318959403219,0.187682475451182,0,0,0,0.564751842617067,0,0,0,0,0,0,0,0.453142408984205,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238436189947321,0,0.0941093804153306,0.0846146078916765,0,0,0.135804113845862,0.561142271657738,0,0.0985044823755635,0,0.154936841185966,0,0,0,0.214871054048298,0,0.441182838239031,0.463735671240843 | |phase1_expression=0.320297694209588,14.6569671208532,23.6599604482559,2.11724947914781,2.00358291978539,10.0727563147134,11.6806320297763,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.3192271249275,20.4174260149781,17.2269589234506,24.5534337810673,23.9173068281337,6.65081968097309,2.77233142735924,6.65191531965914,0,0,0,1.44425809875637,0.664938581433969,1.02084678131185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.45673551887624,0,0,0,0,0,0,0,0,1.23597483867187,0,0,0.323533699894818,0,0,0,0,0,0.766371165625774,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278047249225598,0.696504333044333,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.97376904685418,0,0,0,0.257734922644187,0.201683524623343,0.444756087689741,0.190225626112559,1.42358718463353,0.494096864172033,1.50801125280162,0.994782360205754,1.36474860983384,0.898819408654221,2.37751854862164,0.796565093017469,0,0,0,0,0,0,0,0.147610147979602,0.156998727841375,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.83528546038072,9.65778612066564,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.516856586336442,0.363533729477506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120625849856312,0,0,1.1659233465194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.269728692769641,0,0,0.518459893167171,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0.19318959403219,0.187682475451182,0,0,0,0.564751842617067,0,0,0,0,0,0,0,0.453142408984205,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238436189947321,0,0.0941093804153306,0.0846146078916765,0,0,0.135804113845862,0.561142271657738,0,0.0985044823755635,0,0.154936841185966,0,0,0,0.214871054048298,0,0.441182838239031,0.463735671240843 | ||
|short_description=p@chr1:183215926..183215959,+ | |short_description=p@chr1:183215926..183215959,+ | ||
}} | }} |
Latest revision as of 10:23, 5 August 2015
Short description: | p@chr1:183215926..183215959, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:183215926..183215959, + |
Coexpression cluster: | MCL_coexpression_mm9:58 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 1.47e-24 | 9 |
epithelial cell of alimentary canal | 1.47e-24 | 9 |
brush border epithelial cell | 7.57e-22 | 6 |
gut absorptive cell | 7.57e-22 | 6 |
enterocyte | 7.57e-22 | 6 |
columnar/cuboidal epithelial cell | 1.18e-18 | 7 |
epithelial cell | 5.18e-16 | 25 |
endo-epithelial cell | 2.72e-14 | 15 |
M cell of gut | 1.36e-12 | 3 |
endodermal cell | 1.96e-10 | 20 |
Ontology term | p-value | n |
---|---|---|
mucosa | 5.28e-45 | 15 |
intestinal mucosa | 9.95e-38 | 13 |
wall of intestine | 9.95e-38 | 13 |
gastrointestinal system mucosa | 9.95e-38 | 13 |
organ component layer | 4.00e-31 | 24 |
intestine | 9.44e-30 | 31 |
epithelium of mucosa | 1.47e-24 | 9 |
gastrointestinal system epithelium | 1.47e-24 | 9 |
intestinal epithelium | 1.47e-24 | 9 |
simple columnar epithelium | 6.79e-20 | 11 |
gastrointestinal system | 1.49e-18 | 47 |
small intestine | 2.65e-14 | 4 |
ileal mucosa | 2.01e-11 | 3 |
ileum | 2.01e-11 | 3 |
mucosa of small intestine | 2.01e-11 | 3 |
wall of small intestine | 2.01e-11 | 3 |
gut-associated lymphoid tissue | 9.05e-09 | 2 |
mucosa-associated lymphoid tissue | 9.05e-09 | 2 |
lymphoid tissue | 9.05e-09 | 2 |
mammary gland | 2.30e-08 | 2 |
external ectoderm | 2.30e-08 | 2 |
mammary bud | 2.30e-08 | 2 |
mammary ridge | 2.30e-08 | 2 |
mammary placode | 2.30e-08 | 2 |
digestive system | 1.33e-07 | 116 |
digestive tract | 1.33e-07 | 116 |
primitive gut | 1.33e-07 | 116 |
endoderm-derived structure | 2.06e-07 | 118 |
endoderm | 2.06e-07 | 118 |
presumptive endoderm | 2.06e-07 | 118 |