FFCP PHASE1:Mm9::chr1:186682290..186682296,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene= | |EntrezGene= | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=24 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENSMUST00000157937_5end | |association_with_transcript=0bp_to_ENSMUST00000157937_5end | ||
|cluster_id=chr1:186682290..186682296,- | |||
|description=CAGE_peak_1_at_ENSMUST00000157937_5end | |description=CAGE_peak_1_at_ENSMUST00000157937_5end | ||
|id=chr1:186682290..186682296,- | |id=chr1:186682290..186682296,- | ||
|ontology_enrichment_celltype=CL:0002563!1.94e-15!9;CL:0002251!1.94e-15!9;CL:0000066!1.05e-12!25;CL:0000239!4.65e-11!6;CL:0000677!4.65e-11!6;CL:0000212!4.65e-11!6;CL:0000584!4.65e-11!6;CL:0000223!2.77e-10!20;CL:0000075!2.63e-09!7;CL:0002076!2.58e-08!15 | |ontology_enrichment_celltype=CL:0002563!1.94e-15!9;CL:0002251!1.94e-15!9;CL:0000066!1.05e-12!25;CL:0000239!4.65e-11!6;CL:0000677!4.65e-11!6;CL:0000212!4.65e-11!6;CL:0000584!4.65e-11!6;CL:0000223!2.77e-10!20;CL:0000075!2.63e-09!7;CL:0002076!2.58e-08!15 | ||
|ontology_enrichment_celltype_v019_2=CL:0002563,4.50e-32,9;CL:0002251,4.50e-32,9;CL:0000239,9.19e-28,6;CL:0000677,9.19e-28,6;CL:0000584,9.19e-28,6;CL:0000066,1.11e-24,25;CL:0000075,9.65e-24,7;CL:0002076,7.41e-19,15;CL:0000223,2.21e-17,20;CL:0000682,1.30e-14,3;CL:0002250,5.99e-07,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!1.67e-23!15;UBERON:0001242!2.19e-20!13;UBERON:0000060!2.19e-20!13;UBERON:0001262!2.19e-20!13;UBERON:0004786!2.19e-20!13;UBERON:0004923!4.68e-17!24;UBERON:0003350!1.94e-15!9;UBERON:0004808!1.94e-15!9;UBERON:0001277!1.94e-15!9;UBERON:0000485!3.45e-12!11;UBERON:0001007!7.97e-09!128;UBERON:0001555!7.97e-09!128;UBERON:0007026!7.97e-09!128;UBERON:0004119!1.55e-08!130;UBERON:0000925!1.55e-08!130;UBERON:0006595!1.55e-08!130;UBERON:0000160!4.25e-08!43;UBERON:0005409!1.10e-07!59;UBERON:0004921!1.55e-07!126;UBERON:0004185!1.55e-07!126 | |ontology_enrichment_uberon=UBERON:0000344!1.67e-23!15;UBERON:0001242!2.19e-20!13;UBERON:0000060!2.19e-20!13;UBERON:0001262!2.19e-20!13;UBERON:0004786!2.19e-20!13;UBERON:0004923!4.68e-17!24;UBERON:0003350!1.94e-15!9;UBERON:0004808!1.94e-15!9;UBERON:0001277!1.94e-15!9;UBERON:0000485!3.45e-12!11;UBERON:0001007!7.97e-09!128;UBERON:0001555!7.97e-09!128;UBERON:0007026!7.97e-09!128;UBERON:0004119!1.55e-08!130;UBERON:0000925!1.55e-08!130;UBERON:0006595!1.55e-08!130;UBERON:0000160!4.25e-08!43;UBERON:0005409!1.10e-07!59;UBERON:0004921!1.55e-07!126;UBERON:0004185!1.55e-07!126 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,2.74e-35,15;UBERON:0003350,4.50e-32,9;UBERON:0004808,4.50e-32,9;UBERON:0001277,4.50e-32,9;UBERON:0001242,1.96e-27,13;UBERON:0001262,1.96e-27,13;UBERON:0004786,1.96e-27,13;UBERON:0000485,4.52e-26,11;UBERON:0004923,1.69e-25,24;UBERON:0000160,6.71e-16,31;UBERON:0001962,5.16e-10,2;UBERON:0001961,5.16e-10,2;UBERON:0001744,5.16e-10,2;UBERON:0005409,6.76e-10,47;UBERON:0001007,2.82e-07,116;UBERON:0001555,2.82e-07,116;UBERON:0007026,2.82e-07,116;UBERON:0004119,4.16e-07,118;UBERON:0000925,4.16e-07,118;UBERON:0006595,4.16e-07,118;UBERON:0002465,5.99e-07,3;UBERON:0003929,9.05e-07,55 | |||
|phase1_expression=0,23.3813523118372,17.7449703361919,16.030603199262,13.023288978605,9.73699777088961,5.37309073369709,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.03966660290989,10.782236210157,20.0981187440257,12.0613358924541,8.18790684206378,0.570070258369122,0.252030129759931,1.77384408524244,0,0,0,8.37669697278696,0.997407872150954,8.98345167554424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44932244350839,0,0.679971333707751,0.539703191637817,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0,0,0,0,0,0,0.117588707135705,0,2.96633961281249,0,0,0,0,0,0,0,0,1.27728527604296,0,0,0,0,0,0,0,0.255715457330331,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0.219550115291051,0,0,0,0.330418782983798,0.528901133327089,0,0,0,0,0,0,0,0,0,0,0,0,0.216138049874694,1.39398891278057,0,0.114248512609729,0,0,0,0.280543279561274,0,0.147610147979602,0.31399745568275,0,0,0,0,0,0,0,0.50925170356284,0.287696137450811,0,0.274561413188081,1.43768206527355,0,0,0.252578877947112,0.358794827043824,0,0,0,0.162964976442026,0,0,0.167506257441816,0,0,0,0.221464689648775,0.159454768657487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0.178065603667255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129358683782755,0,0,0,0,0,0,0,0,0,0,0,0,0,0.291480836629851,0,0,0,0.370389054739423,0,0,0,0,0.139951452323658,0,0,0,0,0,0.209088296014469,0,0,0.165306911450672,0,0.777689839750757,2.4853572523477,0,0,0,0,0,0,0,0,0,0,0.288030006257865,0,0,0,0,0,0,0,0,0,0,0,0.0974578807397524,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.342869252385415,0,0,0,0,0.0846146078916765,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220591419119515,0 | |phase1_expression=0,23.3813523118372,17.7449703361919,16.030603199262,13.023288978605,9.73699777088961,5.37309073369709,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.03966660290989,10.782236210157,20.0981187440257,12.0613358924541,8.18790684206378,0.570070258369122,0.252030129759931,1.77384408524244,0,0,0,8.37669697278696,0.997407872150954,8.98345167554424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44932244350839,0,0.679971333707751,0.539703191637817,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0,0,0,0,0,0,0.117588707135705,0,2.96633961281249,0,0,0,0,0,0,0,0,1.27728527604296,0,0,0,0,0,0,0,0.255715457330331,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0.219550115291051,0,0,0,0.330418782983798,0.528901133327089,0,0,0,0,0,0,0,0,0,0,0,0,0.216138049874694,1.39398891278057,0,0.114248512609729,0,0,0,0.280543279561274,0,0.147610147979602,0.31399745568275,0,0,0,0,0,0,0,0.50925170356284,0.287696137450811,0,0.274561413188081,1.43768206527355,0,0,0.252578877947112,0.358794827043824,0,0,0,0.162964976442026,0,0,0.167506257441816,0,0,0,0.221464689648775,0.159454768657487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0.178065603667255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129358683782755,0,0,0,0,0,0,0,0,0,0,0,0,0,0.291480836629851,0,0,0,0.370389054739423,0,0,0,0,0.139951452323658,0,0,0,0,0,0.209088296014469,0,0,0.165306911450672,0,0.777689839750757,2.4853572523477,0,0,0,0,0,0,0,0,0,0,0.288030006257865,0,0,0,0,0,0,0,0,0,0,0,0.0974578807397524,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.342869252385415,0,0,0,0,0.0846146078916765,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220591419119515,0 | ||
|short_description=p1@ENSMUST00000157937 | |short_description=p1@ENSMUST00000157937 | ||
}} | }} |
Latest revision as of 10:53, 5 August 2015
Short description: | p1@ENSMUST00000157937 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_ENSMUST00000157937_5end |
Coexpression cluster: | MCL_coexpression_mm9:24 |
Association with transcript: | 0bp_to_ENSMUST00000157937_5end |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 4.50e-32 | 9 |
epithelial cell of alimentary canal | 4.50e-32 | 9 |
brush border epithelial cell | 9.19e-28 | 6 |
gut absorptive cell | 9.19e-28 | 6 |
enterocyte | 9.19e-28 | 6 |
epithelial cell | 1.11e-24 | 25 |
columnar/cuboidal epithelial cell | 9.65e-24 | 7 |
endo-epithelial cell | 7.41e-19 | 15 |
endodermal cell | 2.21e-17 | 20 |
M cell of gut | 1.30e-14 | 3 |
intestinal crypt stem cell | 5.99e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
mucosa | 2.74e-35 | 15 |
epithelium of mucosa | 4.50e-32 | 9 |
gastrointestinal system epithelium | 4.50e-32 | 9 |
intestinal epithelium | 4.50e-32 | 9 |
intestinal mucosa | 1.96e-27 | 13 |
wall of intestine | 1.96e-27 | 13 |
gastrointestinal system mucosa | 1.96e-27 | 13 |
simple columnar epithelium | 4.52e-26 | 11 |
organ component layer | 1.69e-25 | 24 |
intestine | 6.71e-16 | 31 |
gut-associated lymphoid tissue | 5.16e-10 | 2 |
mucosa-associated lymphoid tissue | 5.16e-10 | 2 |
lymphoid tissue | 5.16e-10 | 2 |
gastrointestinal system | 6.76e-10 | 47 |
digestive system | 2.82e-07 | 116 |
digestive tract | 2.82e-07 | 116 |
primitive gut | 2.82e-07 | 116 |
endoderm-derived structure | 4.16e-07 | 118 |
endoderm | 4.16e-07 | 118 |
presumptive endoderm | 4.16e-07 | 118 |
lymphoid system | 5.99e-07 | 3 |
gut epithelium | 9.05e-07 | 55 |