FFCP PHASE1:Mm9::chr1:64780965..64780970,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=12 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:64780965..64780970,- | |||
|description=CAGE_peak_at_chr1:64780965..64780970,- | |description=CAGE_peak_at_chr1:64780965..64780970,- | ||
|id=chr1:64780965..64780970,- | |id=chr1:64780965..64780970,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0002563,6.32e-12,9;CL:0002251,6.32e-12,9;CL:0002076,2.56e-09,15;CL:0000066,5.36e-09,25;CL:0000239,2.18e-08,6;CL:0000677,2.18e-08,6;CL:0000584,2.18e-08,6;CL:0000223,1.48e-07,20;CL:0000075,4.74e-07,7 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!1.45e-16!59;UBERON:0000160!2.47e-12!43;UBERON:0004119!1.42e-10!130;UBERON:0000925!1.42e-10!130;UBERON:0006595!1.42e-10!130;UBERON:0001007!3.04e-10!128;UBERON:0001555!3.04e-10!128;UBERON:0007026!3.04e-10!128;UBERON:0000344!6.95e-10!15;UBERON:0004923!1.12e-09!24;UBERON:0004921!2.43e-09!126;UBERON:0004185!2.43e-09!126;UBERON:0001242!1.45e-08!13;UBERON:0000060!1.45e-08!13;UBERON:0001262!1.45e-08!13;UBERON:0004786!1.45e-08!13;UBERON:0000481!1.18e-07!230 | |ontology_enrichment_uberon=UBERON:0005409!1.45e-16!59;UBERON:0000160!2.47e-12!43;UBERON:0004119!1.42e-10!130;UBERON:0000925!1.42e-10!130;UBERON:0006595!1.42e-10!130;UBERON:0001007!3.04e-10!128;UBERON:0001555!3.04e-10!128;UBERON:0007026!3.04e-10!128;UBERON:0000344!6.95e-10!15;UBERON:0004923!1.12e-09!24;UBERON:0004921!2.43e-09!126;UBERON:0004185!2.43e-09!126;UBERON:0001242!1.45e-08!13;UBERON:0000060!1.45e-08!13;UBERON:0001262!1.45e-08!13;UBERON:0004786!1.45e-08!13;UBERON:0000481!1.18e-07!230 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0005409,7.64e-23,47;UBERON:0000160,8.61e-23,31;UBERON:0000344,1.44e-17,15;UBERON:0001242,8.84e-15,13;UBERON:0001262,8.84e-15,13;UBERON:0004786,8.84e-15,13;UBERON:0003350,6.32e-12,9;UBERON:0004808,6.32e-12,9;UBERON:0001277,6.32e-12,9;UBERON:0004923,8.18e-11,24;UBERON:0004119,5.90e-10,118;UBERON:0000925,5.90e-10,118;UBERON:0006595,5.90e-10,118;UBERON:0001007,1.31e-09,116;UBERON:0001555,1.31e-09,116;UBERON:0007026,1.31e-09,116;UBERON:0000485,2.28e-09,11;UBERON:0004921,2.73e-08,114;UBERON:0002108,2.66e-07,4;UBERON:0000007,4.82e-07,8;UBERON:0003296,4.82e-07,8;UBERON:0010133,4.82e-07,8 | |||
|phase1_expression=0.480446541314382,1.04692622291808,3.18499467572675,5.14189159221611,8.01433167914156,1.00727563147134,2.33612640595526,0,1.267098499365,0,0,0.239316476986009,0,0.174840804837995,0,2.02475267389826,0.699561878128147,0.157731082679119,0.274228867211478,0,0.425216450755349,0,0,2.3998863419011,7.11168771308227,1.14846392823004,3.01533397311352,1.72376986148711,6.84084310042946,4.78857246543868,3.76941868114018,0,0.61506478758457,0,2.3108129580102,2.1610503896604,2.24586291888606,0,0,0,0.588231488031014,0,0,1.00717454380462,1.82478476195126,0.917733760808408,0,0,0.439372365468944,0,0.139986421625363,0,0.167782606057736,0,0.336093799142464,0,0.286533439938757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0.153606533256243,0,0.0914876436024097,0.52091337055676,0,0.56276261003168,0.15279824777681,0,0,0,0,0.0755715601067855,0.289864488701678,0,1.3599426674155,0,0.649776417447669,0.448026887097336,0.702222100658759,0.340860645156116,1.29893002301434,0,0.704217098883403,0,0,0,1.73192832808971,1.26679932737549,0.505524445014783,4.22480354960522,0.258937883647172,0,0.693941307064543,0.608930956624282,0.230615497256059,0.753613202763113,0.470354828542819,0.628332956648377,0.741584903203122,0,0,0.161766849947409,0.220841518460394,0.969750506270444,0,0.292780797011547,0,2.29911349687732,0.11981512450592,0,0,0.149790639404823,0,0,0,0.255715457330331,0,0,0.203678727700633,0.248813941220186,0.505445516867349,0.841767423545896,3.6433724029557,2.06911893990126,0.360124259610698,3.46621081022145,1.63287597963187,2.3060469651273,1.87403449119458,0,0,0.189106080167819,0,0,0,0,0.205782136407943,0,0,0,0.284163499395593,0.414251545071004,0.234526059981096,0.540186184383045,0,0,0.617068451549513,0.465067889500816,0.268273401399619,0.350296027101508,0.493679549740441,0.656669856316381,0.0810688095458557,0.438599962275997,0.439100230582101,0.268412837520744,0.210289948564127,0.102904612379284,0.660837565967596,1.58670339998127,0.426576501070468,0.696710015581316,0.128867461322093,0,0.667134131534611,1.33157938278791,5.21981967698963,3.12928013975621,2.26201687920243,1.98956472041151,1.9496408711912,3.59527763461689,5.61958929674205,5.17767310461355,0,0.228497025219458,0,0.407302655690628,0,0.350679099451593,0.379419222745544,0.442830443938806,0.156998727841375,0,0.296452627087149,0.333690211432188,0.196558995113203,0.224862112384854,0.608580364165509,0.482354319504834,0.25462585178142,0.863088412352432,0.648540907100142,0.823684239564244,1.43768206527355,0.372140947668503,0,0,0.358794827043824,0,0.184753190166605,0,0,0.339490171550376,0.234690248288502,0.167506257441816,0.238043640886014,0,0.157635144106191,0.44292937929755,0,1.14704320301017,0.690739927463582,1.15719246865209,0,0,0,0,0,0.117211686592203,0.327869890753351,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0.178065603667255,0,0,0,0.242780636154981,0.906970670894253,1.32023555829129,0,0.307435147943927,0.258428293168221,1.45413491791002,0.712994756769443,1.8962205476149,0,1.03135543248187,0,3.06103859853227,2.45781499187234,1.71469628025274,1.06404140185364,1.07021290561242,1.48094118541909,1.2178597964584,0.23467170806371,1.27099242518292,0.220528398054962,0.16488625294148,0,0.482503399425247,1.79058516004705,1.96969079694074,3.49777003955821,0,0.512612642393558,0.206386867963223,0.555583582109135,0.565105371014073,0.27338845544205,0.457556346413045,0.339956859987711,0,0.138199973804424,6.68269432610579,0.949007980743406,0.203319467126849,2.05210147561422,1.04544148007234,1.31017538247707,0.809186078308924,1.07449492442937,2.09404753587224,2.46268449254406,0,0,0.149516546043979,0.330916980914195,0.388902376688095,0.258319646955462,0.168956125490778,0.469428954583016,0.2604087696879,0.314578033277133,0.724752362478018,0,0.316011120628178,0.608175645870493,0.410843828659309,0.51968329191118,0.179026695667481,0,0,0.147689527174577,0.201932899896295,0,0.100826185136841,0.0974578807397524,0,0.233753804363138,0.453460767230423,0,0.0897138566094757,0.671538465456314,0,0,0.36630324853453,0.214368379079066,0,0,0,0,0,0,0.755393897389701,0,0,0,0,0,0.399024873401031,0.170733605754134,0.486213434136588,0.209613162627982,0.183843508450014,0.44449345560323,0.206035057238894,0.320919209591815,0.505394423527595,0,0.188626341386076,0.655490552289177,0.512201219238954,0.402048282689293,0,0.231768651889711,0.38581844092741,0.824171801606613,0.147198920134397,0.685738504770831,0.887379030796687,0.715308569841963,0.436039249896986,0.470546902076653,0.423073039458382,0.182927972872773,0,0.814824683075171,0.561142271657738,0.237270036248348,0.197008964751127,0,0,0.578719832943424,0.249810577937946,0.233931608445408,0,0,0.441182838239031,0 | |phase1_expression=0.480446541314382,1.04692622291808,3.18499467572675,5.14189159221611,8.01433167914156,1.00727563147134,2.33612640595526,0,1.267098499365,0,0,0.239316476986009,0,0.174840804837995,0,2.02475267389826,0.699561878128147,0.157731082679119,0.274228867211478,0,0.425216450755349,0,0,2.3998863419011,7.11168771308227,1.14846392823004,3.01533397311352,1.72376986148711,6.84084310042946,4.78857246543868,3.76941868114018,0,0.61506478758457,0,2.3108129580102,2.1610503896604,2.24586291888606,0,0,0,0.588231488031014,0,0,1.00717454380462,1.82478476195126,0.917733760808408,0,0,0.439372365468944,0,0.139986421625363,0,0.167782606057736,0,0.336093799142464,0,0.286533439938757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0.153606533256243,0,0.0914876436024097,0.52091337055676,0,0.56276261003168,0.15279824777681,0,0,0,0,0.0755715601067855,0.289864488701678,0,1.3599426674155,0,0.649776417447669,0.448026887097336,0.702222100658759,0.340860645156116,1.29893002301434,0,0.704217098883403,0,0,0,1.73192832808971,1.26679932737549,0.505524445014783,4.22480354960522,0.258937883647172,0,0.693941307064543,0.608930956624282,0.230615497256059,0.753613202763113,0.470354828542819,0.628332956648377,0.741584903203122,0,0,0.161766849947409,0.220841518460394,0.969750506270444,0,0.292780797011547,0,2.29911349687732,0.11981512450592,0,0,0.149790639404823,0,0,0,0.255715457330331,0,0,0.203678727700633,0.248813941220186,0.505445516867349,0.841767423545896,3.6433724029557,2.06911893990126,0.360124259610698,3.46621081022145,1.63287597963187,2.3060469651273,1.87403449119458,0,0,0.189106080167819,0,0,0,0,0.205782136407943,0,0,0,0.284163499395593,0.414251545071004,0.234526059981096,0.540186184383045,0,0,0.617068451549513,0.465067889500816,0.268273401399619,0.350296027101508,0.493679549740441,0.656669856316381,0.0810688095458557,0.438599962275997,0.439100230582101,0.268412837520744,0.210289948564127,0.102904612379284,0.660837565967596,1.58670339998127,0.426576501070468,0.696710015581316,0.128867461322093,0,0.667134131534611,1.33157938278791,5.21981967698963,3.12928013975621,2.26201687920243,1.98956472041151,1.9496408711912,3.59527763461689,5.61958929674205,5.17767310461355,0,0.228497025219458,0,0.407302655690628,0,0.350679099451593,0.379419222745544,0.442830443938806,0.156998727841375,0,0.296452627087149,0.333690211432188,0.196558995113203,0.224862112384854,0.608580364165509,0.482354319504834,0.25462585178142,0.863088412352432,0.648540907100142,0.823684239564244,1.43768206527355,0.372140947668503,0,0,0.358794827043824,0,0.184753190166605,0,0,0.339490171550376,0.234690248288502,0.167506257441816,0.238043640886014,0,0.157635144106191,0.44292937929755,0,1.14704320301017,0.690739927463582,1.15719246865209,0,0,0,0,0,0.117211686592203,0.327869890753351,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0.178065603667255,0,0,0,0.242780636154981,0.906970670894253,1.32023555829129,0,0.307435147943927,0.258428293168221,1.45413491791002,0.712994756769443,1.8962205476149,0,1.03135543248187,0,3.06103859853227,2.45781499187234,1.71469628025274,1.06404140185364,1.07021290561242,1.48094118541909,1.2178597964584,0.23467170806371,1.27099242518292,0.220528398054962,0.16488625294148,0,0.482503399425247,1.79058516004705,1.96969079694074,3.49777003955821,0,0.512612642393558,0.206386867963223,0.555583582109135,0.565105371014073,0.27338845544205,0.457556346413045,0.339956859987711,0,0.138199973804424,6.68269432610579,0.949007980743406,0.203319467126849,2.05210147561422,1.04544148007234,1.31017538247707,0.809186078308924,1.07449492442937,2.09404753587224,2.46268449254406,0,0,0.149516546043979,0.330916980914195,0.388902376688095,0.258319646955462,0.168956125490778,0.469428954583016,0.2604087696879,0.314578033277133,0.724752362478018,0,0.316011120628178,0.608175645870493,0.410843828659309,0.51968329191118,0.179026695667481,0,0,0.147689527174577,0.201932899896295,0,0.100826185136841,0.0974578807397524,0,0.233753804363138,0.453460767230423,0,0.0897138566094757,0.671538465456314,0,0,0.36630324853453,0.214368379079066,0,0,0,0,0,0,0.755393897389701,0,0,0,0,0,0.399024873401031,0.170733605754134,0.486213434136588,0.209613162627982,0.183843508450014,0.44449345560323,0.206035057238894,0.320919209591815,0.505394423527595,0,0.188626341386076,0.655490552289177,0.512201219238954,0.402048282689293,0,0.231768651889711,0.38581844092741,0.824171801606613,0.147198920134397,0.685738504770831,0.887379030796687,0.715308569841963,0.436039249896986,0.470546902076653,0.423073039458382,0.182927972872773,0,0.814824683075171,0.561142271657738,0.237270036248348,0.197008964751127,0,0,0.578719832943424,0.249810577937946,0.233931608445408,0,0,0.441182838239031,0 | ||
|short_description=p@chr1:64780965..64780970,- | |short_description=p@chr1:64780965..64780970,- | ||
}} | }} |
Latest revision as of 21:05, 5 August 2015
Short description: | p@chr1:64780965..64780970, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:64780965..64780970, - |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 6.32e-12 | 9 |
epithelial cell of alimentary canal | 6.32e-12 | 9 |
endo-epithelial cell | 2.56e-09 | 15 |
epithelial cell | 5.36e-09 | 25 |
brush border epithelial cell | 2.18e-08 | 6 |
gut absorptive cell | 2.18e-08 | 6 |
enterocyte | 2.18e-08 | 6 |
endodermal cell | 1.48e-07 | 20 |
columnar/cuboidal epithelial cell | 4.74e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system | 7.64e-23 | 47 |
intestine | 8.61e-23 | 31 |
mucosa | 1.44e-17 | 15 |
intestinal mucosa | 8.84e-15 | 13 |
wall of intestine | 8.84e-15 | 13 |
gastrointestinal system mucosa | 8.84e-15 | 13 |
epithelium of mucosa | 6.32e-12 | 9 |
gastrointestinal system epithelium | 6.32e-12 | 9 |
intestinal epithelium | 6.32e-12 | 9 |
organ component layer | 8.18e-11 | 24 |
endoderm-derived structure | 5.90e-10 | 118 |
endoderm | 5.90e-10 | 118 |
presumptive endoderm | 5.90e-10 | 118 |
digestive system | 1.31e-09 | 116 |
digestive tract | 1.31e-09 | 116 |
primitive gut | 1.31e-09 | 116 |
simple columnar epithelium | 2.28e-09 | 11 |
subdivision of digestive tract | 2.73e-08 | 114 |
small intestine | 2.66e-07 | 4 |
pituitary gland | 4.82e-07 | 8 |
gland of diencephalon | 4.82e-07 | 8 |
neuroendocrine gland | 4.82e-07 | 8 |