FFCP PHASE1:Mm9::chr2:77008649..77008702,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=545428 | |EntrezGene=545428 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=19 | |||
|TSSclassifier=NA | |||
|UniProt=Q8BLW1,A2AST1,D6RJ38,E9Q8Q6,Q8BLD3,Q8BUK9 | |UniProt=Q8BLW1,A2AST1,D6RJ38,E9Q8Q6,Q8BLD3,Q8BUK9 | ||
|association_with_transcript=0bp_to_ENSMUST00000028406,ENSMUST00000049544,ENSMUST00000131660,ENSMUST00000133503,ENSMUST00000164114,NM_001025576,uc008kfv.2,uc008kfw.2,uc012bxr.1,uc012bxs.1_5end | |association_with_transcript=0bp_to_ENSMUST00000028406,ENSMUST00000049544,ENSMUST00000131660,ENSMUST00000133503,ENSMUST00000164114,NM_001025576,uc008kfv.2,uc008kfw.2,uc012bxr.1,uc012bxs.1_5end | ||
|cluster_id=chr2:77008649..77008702,- | |||
|description=CAGE_peak_1_at_Ccdc141_5end | |description=CAGE_peak_1_at_Ccdc141_5end | ||
|id=chr2:77008649..77008702,- | |id=chr2:77008649..77008702,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007100!2.39e-09!18;UBERON:0000948!2.39e-09!18;UBERON:0005498!2.39e-09!18;UBERON:0004140!2.39e-09!18;UBERON:0009881!2.39e-09!18;UBERON:0004141!2.39e-09!18;UBERON:0003084!2.39e-09!18;UBERON:0007005!2.39e-09!18;UBERON:0004139!2.39e-09!18;UBERON:0004291!2.39e-09!18;UBERON:0000468!7.33e-09!333;UBERON:0004535!4.07e-08!23;UBERON:0001009!4.07e-08!23;UBERON:0000025!1.49e-07!114;UBERON:0003914!1.80e-07!47;UBERON:0002048!2.91e-07!14;UBERON:0000117!2.91e-07!14;UBERON:0000171!2.91e-07!14;UBERON:0000170!2.91e-07!14;UBERON:0005597!2.91e-07!14;UBERON:0000118!2.91e-07!14;UBERON:0001048!4.57e-07!147;UBERON:0004111!7.28e-07!122;UBERON:0003103!8.20e-07!43 | |ontology_enrichment_uberon=UBERON:0007100!2.39e-09!18;UBERON:0000948!2.39e-09!18;UBERON:0005498!2.39e-09!18;UBERON:0004140!2.39e-09!18;UBERON:0009881!2.39e-09!18;UBERON:0004141!2.39e-09!18;UBERON:0003084!2.39e-09!18;UBERON:0007005!2.39e-09!18;UBERON:0004139!2.39e-09!18;UBERON:0004291!2.39e-09!18;UBERON:0000468!7.33e-09!333;UBERON:0004535!4.07e-08!23;UBERON:0001009!4.07e-08!23;UBERON:0000025!1.49e-07!114;UBERON:0003914!1.80e-07!47;UBERON:0002048!2.91e-07!14;UBERON:0000117!2.91e-07!14;UBERON:0000171!2.91e-07!14;UBERON:0000170!2.91e-07!14;UBERON:0005597!2.91e-07!14;UBERON:0000118!2.91e-07!14;UBERON:0001048!4.57e-07!147;UBERON:0004111!7.28e-07!122;UBERON:0003103!8.20e-07!43 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0007100,1.94e-09,18;UBERON:0000948,1.94e-09,18;UBERON:0005498,1.94e-09,18;UBERON:0004140,1.94e-09,18;UBERON:0009881,1.94e-09,18;UBERON:0004141,1.94e-09,18;UBERON:0003084,1.94e-09,18;UBERON:0007005,1.94e-09,18;UBERON:0004139,1.94e-09,18;UBERON:0004291,1.94e-09,18;UBERON:0004535,3.41e-08,23;UBERON:0001009,3.41e-08,23;UBERON:0002048,2.50e-07,14;UBERON:0000117,2.50e-07,14;UBERON:0000171,2.50e-07,14;UBERON:0000170,2.50e-07,14;UBERON:0005597,2.50e-07,14;UBERON:0000118,2.50e-07,14;UBERON:0003914,2.81e-07,47;UBERON:0000025,5.86e-07,114;UBERON:0003103,7.12e-07,43 | |||
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|phase1_expression=5.92550734287738,0,0.909998478779072,0,0.500895729946347,4.02910252588535,3.73780224952841,1.54947988129892,0.422366166455,0,0.171217968225505,0.239316476986009,0.684802919724823,0.786783621770977,0,0.607425802169478,1.39912375625629,0.157731082679119,0.274228867211478,0,13.0116233931137,0.0992909512008853,0,2.71987118748791,1.60586496747019,0,0,1.29282739611533,0.190023419456374,0.756090389279792,1.77384408524244,3.17515336729816,2.46025915033828,0,1.73310971850765,0.166234645358492,0.816677425049476,0,0,0,0,0,0,2.26614272356039,2.93993100536592,6.79122982998222,0.782391344348039,1.09012578190223,0.878744730937887,2.3331587888914,0.839918529752175,0,0,0,0.336093799142464,2.57259436035947,3.43840127926508,5.15672092277442,0.202316460859598,0,1.26766280701236,0,0,0,0,0,0,1.15265491596466,0.622137673850866,0.135005938331691,0.630974884054146,2.85650984403804,3.09215957332259,0.979926393719632,0.575072826109418,0,5.50579404996943,7.78892762319645,9.21639199537461,0.659431438650969,1.64677758484337,1.04182674111352,1.95428099300967,5.6276261003168,4.73674568108111,4.71405736757868,7.26095572075425,2.42319279572891,0.227178579999552,0.604572480854284,11.3047150593654,8.60423876981386,2.719885334831,12.9528765993076,8.4470934268197,9.85659151614138,5.47733238513832,1.36344258062446,0.259786004602869,0.35333957451034,1.26759077799012,0,0,0,3.46385665617943,2.02687892380079,2.02209778005913,8.67797485864856,5.95557132388495,4.30482203287992,3.29622120855658,7.91610243611567,5.5347719341454,6.17962826265753,8.23120949949934,2.76466500925286,7.66304399976559,9.25435884287435,0,27.9856650409018,3.97514733228708,1.93950101254089,0,4.9772735491963,12.5668024088073,2.04365644166873,0.718890747035522,0.599902730993408,0.254140454146129,15.1288545798871,6.40500843946077,3.76963056338593,7.64827008846016,11.5071955798649,12.0517065844545,15.8996437806402,13.9519928474933,5.22509276562391,3.79084137650512,3.57751155007006,5.07469727554544,3.44853156650209,7.74267158163002,11.6042709733501,7.8241974024027,7.30248205623644,5.528401749024,9.8307280880826,1.07783996466421,10.5899404893979,6.862093842394,8.54863356467542,11.3999372182495,14.9748431604532,10.0833246839892,8.35943920637671,0,0,0,107.912527490996,94.5140021723818,92.0117134065786,95.8816179120101,105.268863984861,111.2265883918,109.058420087941,92.8225968842682,98.6667143002582,94.1282341505108,104.738842082463,89.6621033577164,101.901391235457,83.4290438105992,75.0213880870478,12.6173969138476,5.14523061896422,0.660837565967596,0.793351699990633,3.83918850963421,7.19933682767359,5.54130083685001,2.62188582010345,3.7804267453628,4.94586627892654,1.89811624617805,2.63518327558417,2.5133520880027,3.97912944082302,2.9244613067868,3.59527763461689,1.72910439899755,0.995706366271836,1.89667900953082,7.65465034485183,7.88954149711563,11.2008230314923,11.0552917685547,9.53847150508332,24.9151956269574,30.8505209277369,44.4306399791091,29.9855108329975,11.2651998293117,3.67059232575407,0.982794975566015,0.899448449539415,1.01430060694251,1.20588579876208,4.07401362850272,10.9324532231308,6.32327384422638,12.6298250066517,8.62609239164127,15.6299198020771,16.8500343481863,17.9331003342449,21.5276896226295,15.9206362049911,33.6250806103221,18.9491411770485,8.47417877498535,9.50572480341054,12.4385831592906,31.826188913945,33.3261097240419,48.3931446687341,32.9457451181939,32.9982387576675,34.6016847986747,34.2474327755892,32.8101465545202,49.9039252106215,0,0,0.983528546038072,1.37968373152366,12.2018448390722,15.9407893765396,1.63934945376675,9.3414243065618,0,0.390438744296638,0,0.238968797952552,0,0,0.809621403349789,0.292255857911312,0,11.2462460747632,20.1554920995741,9.97167380536629,16.7773568134183,46.8515149242001,19.9117707509944,3.64170954232472,2.41858845571801,4.90373207365335,1.47650946440386,5.53383266299069,2.84271122485043,5.45300594216258,7.84294232446387,13.9056173491759,20.0295356292498,15.470331487228,9.53230896110606,3.6012218806262,0.776152102696527,3.85806663056866,4.07882537377229,3.21063871683727,5.10101963866575,2.13125464380219,6.33613611772018,1.0591603543191,0.882113592219848,2.14352128823924,15.6620493895028,10.2531972377865,3.9392873521035,2.79039529566604,2.62332752966866,10.3838169125885,0.512612642393558,4.33412422722767,5.92622487583077,2.63715839806567,1.6403307326523,0.915112692826091,1.01987057996313,1.39951452323658,1.38199973804424,5.72802370809068,3.32152793260192,6.50622294805916,9.93649135560572,10.8725913927524,7.42432716737004,12.002926828249,14.5470082076591,10.4702376793612,3.11075935900303,37.2803587852155,0,7.92437694033088,10.092967917883,19.4451188344048,18.0823752868824,22.8090769412551,20.3028022857154,14.4526867176785,12.5831213310853,5.07326653734613,5.18454011264158,3.16011120628178,4.25722952109345,4.31386020092274,4.02754551231165,2.50637373934474,4.17230845040656,2.52410443991935,2.65841148914239,4.54349024766664,3.42930629947499,2.31900225814733,2.53390489923356,4.32953287381483,5.14258369598903,1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| ||
|short_description=p1@Ccdc141 | |short_description=p1@Ccdc141 | ||
}} | }} |
Latest revision as of 00:28, 27 September 2015
Short description: | p1@Ccdc141 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Ccdc141_5end |
Coexpression cluster: | MCL_coexpression_mm9:19 |
Association with transcript: | 0bp_to_ENSMUST00000028406, ENSMUST00000049544, ENSMUST00000131660, ENSMUST00000133503, ENSMUST00000164114, NM_001025576, uc008kfv.2, uc008kfw.2, uc012bxr.1, uc012bxs.1_5end |
EntrezGene: | Ccdc141 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
primary circulatory organ | 1.94e-09 | 18 |
heart | 1.94e-09 | 18 |
primitive heart tube | 1.94e-09 | 18 |
primary heart field | 1.94e-09 | 18 |
anterior lateral plate mesoderm | 1.94e-09 | 18 |
heart tube | 1.94e-09 | 18 |
heart primordium | 1.94e-09 | 18 |
cardiac mesoderm | 1.94e-09 | 18 |
cardiogenic plate | 1.94e-09 | 18 |
heart rudiment | 1.94e-09 | 18 |
cardiovascular system | 3.41e-08 | 23 |
circulatory system | 3.41e-08 | 23 |
lung | 2.50e-07 | 14 |
respiratory tube | 2.50e-07 | 14 |
respiration organ | 2.50e-07 | 14 |
pair of lungs | 2.50e-07 | 14 |
lung primordium | 2.50e-07 | 14 |
lung bud | 2.50e-07 | 14 |
epithelial tube | 2.81e-07 | 47 |
tube | 5.86e-07 | 114 |
compound organ | 7.12e-07 | 43 |