FFCP PHASE1:Hg19::chr13:31437608..31437620,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr13:31437608..31437620,+ | |||
|coexpression_cluster_id=C49 | |||
|description=CAGE_peak_at_chr13:31437608..31437620,+ | |description=CAGE_peak_at_chr13:31437608..31437620,+ | ||
|id=chr13:31437608..31437620,+ | |id=chr13:31437608..31437620,+ | ||
|ontology_enrichment_celltype=CL:0002322!3.81e-44!5;CL:0000039!3.10e-20!7;CL:0000586!3.10e-20!7;CL:0000540!5.88e-14!6;CL:0000031!5.88e-14!6;CL:0000404!5.88e-14!6;CL:0000047!1.33e-10!8;CL:0000148!1.60e-08!10;CL:0000541!1.60e-08!10 | |ontology_enrichment_celltype=CL:0002322!3.81e-44!5;CL:0000039!3.10e-20!7;CL:0000586!3.10e-20!7;CL:0000540!5.88e-14!6;CL:0000031!5.88e-14!6;CL:0000404!5.88e-14!6;CL:0000047!1.33e-10!8;CL:0000148!1.60e-08!10;CL:0000541!1.60e-08!10 | ||
|ontology_enrichment_celltype_v019=CL:0002322;8.41e-46;5!CL:0000540;9.22e-22;6!CL:0000404;9.22e-22;6!CL:0000039;7.80e-19;7!CL:0000586;7.80e-19;7!CL:0002321;1.50e-15;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,7.08e-46,5;CL:0000540,5.80e-22,6;CL:0000031,5.80e-22,6;CL:0000404,5.80e-22,6;CL:0000039,9.08e-19,7;CL:0000586,9.08e-19,7;CL:0000047,1.20e-16,8 | |||
|ontology_enrichment_development_v019=UBERON:0009117;7.21e-23;10!UBERON:0005564;7.21e-23;10!CL:0000031;9.22e-22;6 | |||
|ontology_enrichment_disease=DOID:3095!6.79e-14!22;DOID:2994!6.79e-14!22 | |||
|ontology_enrichment_disease_v019=DOID:3095;4.17e-16;22!DOID:2994;4.17e-16;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,5.21e-16,22;DOID:2994,5.21e-16,22 | |||
|ontology_enrichment_uberon=UBERON:0000473!6.47e-27!8;UBERON:0003135!1.44e-19!11;UBERON:0000991!2.08e-14!21;UBERON:0009196!2.08e-14!21;UBERON:0009117!2.08e-14!21;UBERON:0005564!2.08e-14!21;UBERON:0004176!9.81e-14!22;UBERON:0002146!7.55e-10!1;UBERON:0005623!7.55e-10!1;UBERON:0003101!9.96e-10!22;UBERON:0000079!9.96e-10!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;1.45e-16;8!UBERON:0003135;3.19e-12;11!UBERON:0000991;4.56e-11;21!UBERON:0000922;6.09e-08;49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,1.65e-16,8;UBERON:0003135,3.51e-12,11;UBERON:0000991,5.27e-11,21;UBERON:0009196,5.27e-11,21;UBERON:0009117,5.27e-11,21;UBERON:0005564,5.27e-11,21;UBERON:0004176,1.62e-10,22 | |||
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|short_description=p@chr13:31437608..31437620,+ | |short_description=p@chr13:31437608..31437620,+ | ||
}} | }} |
Latest revision as of 15:35, 24 July 2015
Short description: | p@chr13:31437608..31437620, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:31437608..31437620, + |
Coexpression cluster: | C49_H9_iPS_testicular_HES3GFP_teratocarcinoma_hepatoblastoma_choriocarcinoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 7.08e-46 | 5 |
neuron | 5.80e-22 | 6 |
neuroblast | 5.80e-22 | 6 |
electrically signaling cell | 5.80e-22 | 6 |
germ line cell | 9.08e-19 | 7 |
germ cell | 9.08e-19 | 7 |
neuronal stem cell | 1.20e-16 | 8 |
Ontology term | p-value | n |
---|---|---|
testis | 1.65e-16 | 8 |
male reproductive organ | 3.51e-12 | 11 |
gonad | 5.27e-11 | 21 |
indifferent external genitalia | 5.27e-11 | 21 |
indifferent gonad | 5.27e-11 | 21 |
gonad primordium | 5.27e-11 | 21 |
external genitalia | 1.62e-10 | 22 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 5.21e-16 | 22 |
germ cell cancer | 5.21e-16 | 22 |