FFCP PHASE1:Hg19::chr10:105428458..105428467,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9644 | |EntrezGene=9644 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=23664 | |HGNC=23664 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-26bp_to_uc010qqs.1_5end | |association_with_transcript=-26bp_to_uc010qqs.1_5end | ||
|cluster_id=chr10:105428458..105428467,- | |||
|coexpression_cluster_id=C2033 | |||
|description=CAGE_peak_13_at_SH3PXD2A_5end | |description=CAGE_peak_13_at_SH3PXD2A_5end | ||
|id=chr10:105428458..105428467,- | |id=chr10:105428458..105428467,- | ||
|ontology_enrichment_celltype=CL:0000057!7.81e-16!75;CL:0002334!4.54e-14!12;CL:0000136!2.62e-10!15;CL:0000048!3.08e-10!430;CL:0002494!4.53e-10!16;CL:0000055!4.99e-10!180;CL:0000723!1.00e-09!436;CL:0000034!4.55e-09!444;CL:0000134!6.53e-09!358;CL:0002620!1.13e-08!23;CL:0002320!2.57e-08!365;CL:0000219!5.52e-07!390 | |ontology_enrichment_celltype=CL:0000057!7.81e-16!75;CL:0002334!4.54e-14!12;CL:0000136!2.62e-10!15;CL:0000048!3.08e-10!430;CL:0002494!4.53e-10!16;CL:0000055!4.99e-10!180;CL:0000723!1.00e-09!436;CL:0000034!4.55e-09!444;CL:0000134!6.53e-09!358;CL:0002620!1.13e-08!23;CL:0002320!2.57e-08!365;CL:0000219!5.52e-07!390 | ||
|ontology_enrichment_celltype_v019=CL:0002334;8.37e-23;12!CL:0002580;3.81e-18;3!CL:0002579;3.81e-18;3!CL:0000136;1.07e-14;13!CL:0000632;1.55e-08;3!CL:0002521;3.34e-08;3!CL:0002615;3.34e-08;3!CL:0000057;1.34e-07;73!CL:0002568;3.51e-07;1!CL:0002581;6.06e-07;1!CL:0002616;6.06e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002334,7.27e-23,12;CL:0002579,3.72e-18,3;CL:0002580,3.93e-18,3;CL:0000057,3.21e-15,76;CL:0000136,1.56e-12,15;CL:0000134,1.92e-10,354;CL:0002320,4.10e-10,361;CL:0000048,3.67e-09,427;CL:0000219,5.93e-09,386;CL:0000723,6.10e-09,433;CL:0000034,1.18e-08,441;CL:0000632,1.41e-08,3;CL:0002521,4.23e-08,3;CL:0002615,5.07e-08,3;CL:0002568,3.32e-07,1;CL:0002581,4.69e-07,1;CL:0002616,5.26e-07,1 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!5.56e-07!14;DOID:17!5.58e-07!5;DOID:450!5.58e-07!5;DOID:66!5.58e-07!5;DOID:423!5.58e-07!5;DOID:0080000!5.58e-07!5;DOID:11722!5.58e-07!5 | |ontology_enrichment_disease=DOID:2394!5.56e-07!14;DOID:17!5.58e-07!5;DOID:450!5.58e-07!5;DOID:66!5.58e-07!5;DOID:423!5.58e-07!5;DOID:0080000!5.58e-07!5;DOID:11722!5.58e-07!5 | ||
|ontology_enrichment_disease_v019=DOID:3571;4.18e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3571,4.43e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0003688!5.34e-10!6;UBERON:0002358!5.34e-10!6;UBERON:0003684!5.34e-10!6;UBERON:0001178!5.34e-10!6;UBERON:0004457!4.24e-09!12;UBERON:0000042!4.24e-09!12;UBERON:0002384!2.40e-08!375;UBERON:0000948!6.07e-08!24;UBERON:0005498!6.07e-08!24;UBERON:0004140!6.07e-08!24;UBERON:0009881!6.07e-08!24;UBERON:0004141!6.07e-08!24;UBERON:0003084!6.07e-08!24;UBERON:0007005!6.07e-08!24;UBERON:0004139!6.07e-08!24;UBERON:0004291!6.07e-08!24;UBERON:0007100!7.86e-08!27;UBERON:0002199!2.83e-07!45;UBERON:0002416!2.83e-07!45;UBERON:0001013!4.31e-07!14 | |||
|ontology_enrichment_uberon_v019=UBERON:0003688;1.67e-23;6!UBERON:0002358;1.67e-23;6!UBERON:0003684;1.67e-23;6!UBERON:0001178;1.67e-23;6!UBERON:0004457;1.33e-15;9!UBERON:0000042;1.33e-15;9!UBERON:0005406;3.16e-12;2!UBERON:0000310;2.06e-09;10!UBERON:0001443;1.46e-08;11!UBERON:0002190;3.34e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,2.79e-23,6;UBERON:0002358,2.79e-23,6;UBERON:0003684,2.79e-23,6;UBERON:0001178,2.79e-23,6;UBERON:0005406,2.14e-12,2;UBERON:0004457,1.56e-11,12;UBERON:0000042,1.56e-11,12;UBERON:0002384,1.15e-09,371;UBERON:0000310,2.02e-09,10;UBERON:0001443,1.44e-08,11;UBERON:0002190,4.23e-08,3 | |||
|phase1_expression=2.54349730978779,0.856402095563933,2.25527046553554,1.0007329835313,0.893922188854576,2.61701557230111,2.53299878168311,0,1.04474251279935,0.245733936501509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0.144846518960824,0.795285947051099,0.486634870302636,0,0,0,0.196468613246569,0,0,0,0.174129737299267,0,0,0,0.371457501329565,0,0,0,0,0,0.275118041940067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.993943903390637,0.633152558322899,0,0.286836620748814,1.06400514659507,0,2.1349799145941,1.48000529050296,0.933633106199299,0.269421344139376,0.490385709340376,0,0,0,0.312160076830321,0,0,0,0,0,0.204154171254893,0,0,0,0,0,0,0,0,0,0,0,0,0,1.97328599257748,0.213557388818567,0.211931901159562,1.20036438433761,0.309157587715317,0,0,0.675105328965065,0.974370051611986,1.7670364197088,0.184099797284599,0,1.06502877754984,0.403008392910561,0.847802961552438,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,2.94017422771084,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352226082707465,0,0,0,0,0,0,0.234004265139238,0.148631162288728,0,0,0,0,0,0,0,1.76096868026452,0.829312462163088,0.864719720501769,1.13618190083742,0,0,0,0,0,0,0,0,0,0,4.78305348303778,0,0,0.531876233169741,0,0,1.41849132023278,0,0,0,0,0,0,0,0,0,0.199945982364114,0,0,0,0,0,0,0.579125226670317,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,5.21026396419431,3.99001130548962,4.2099014164961,3.45975702990393,5.62877973973374,4.50390979202101,2.96836132889982,0.308419387605311,0.887808626565635,0.0821271560138091,0,0.348631135379878,0,0,0,0,0.182091168006717,0,0,0.0770153371044148,0,0,0,0,0,0,0,0.270946437543853,0,0,0,0,0,0,0,0,0,0,0,0.082509499920588,0,0,1.6068392984416,0.096670718292122,0.462145851343933,0,0,0,0.145016693914229,0,0.0890320356467374,0,0,0,0,0,0.31481234683064,0,0,0,0,0,0,0,0,0,0,0,0,1.56989728039846,0.359744915166629,0,0,0.404364963146632,0,0.421258456238981,0.48763373908959,0,2.11300293513511,0.136499911407986,0,0,0,0,0,0,0,0.202910376962704,0,0,0.143411352204052,0.0982490410131212,0,0,0,0.329294892959902,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.324621940274555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.08182271390393,1.6653598399891,0,0,0.146508179271894,0,0,0,0.23874448473769,0,0,0,0.140669416410513,0,0,0,0,0,0,0,0,0.311039587661807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0,0,0,0.461701551022782,0,0,0,0,0.31900115973192,0.183195186803725,0,0,0,0.997270091400938,0,0.19606253431774,0,0,0.476809736941136,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20990716048664,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.717873024576814,0,0.429226048136571,0,0.134366944973453,3.24269895188163,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0.0607495566580247,0,0,0.209818352539992,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0,0,0,0,0.106787412567695,0.157204305099666,0,0,0,0,0,0,0,0.306345576763462,0,0,0,0.244052529803926,0,0,0,0.124192805882767,0,0,0,0,0,0,0,0.74627401443437,0.701139929541673,0,0,0,0,0.228840068396924,0.302461847526478,1.86524640699337,0.295710299979268,0.159296767163702,0,2.32894435314389,0.414706207840855,2.39257543102195,1.04349012362347,0.450772826991655,0,0,0,0.322231671127465,0.464033759878494,1.99047944349308,0,0.343395705182793,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0,0,0,0,0,0.205116364240755,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0.206686796501184,0.19024743058172,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0.131545547125698,0,0,0,0,0,0.913158720509496,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.971421986118279,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0.169927114687817,0.281951753939561,0.45120521581504,0,0,0,0,0,0,0,0,0.135982980381829,0,0,0.371995018166751,0,0,0,0,0,0,0,0,0,0,0,0,0.103432995861895,0,0,0,0,0,0,0.202117188958219,0,0.684466602170562,0,0.0717222053926763,0.332660356546013,0,0,0,0,0,0.366724332548599,0.406896178315738,0,0,0 | |phase1_expression=2.54349730978779,0.856402095563933,2.25527046553554,1.0007329835313,0.893922188854576,2.61701557230111,2.53299878168311,0,1.04474251279935,0.245733936501509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0.144846518960824,0.795285947051099,0.486634870302636,0,0,0,0.196468613246569,0,0,0,0.174129737299267,0,0,0,0.371457501329565,0,0,0,0,0,0.275118041940067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.993943903390637,0.633152558322899,0,0.286836620748814,1.06400514659507,0,2.1349799145941,1.48000529050296,0.933633106199299,0.269421344139376,0.490385709340376,0,0,0,0.312160076830321,0,0,0,0,0,0.204154171254893,0,0,0,0,0,0,0,0,0,0,0,0,0,1.97328599257748,0.213557388818567,0.211931901159562,1.20036438433761,0.309157587715317,0,0,0.675105328965065,0.974370051611986,1.7670364197088,0.184099797284599,0,1.06502877754984,0.403008392910561,0.847802961552438,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,2.94017422771084,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352226082707465,0,0,0,0,0,0,0.234004265139238,0.148631162288728,0,0,0,0,0,0,0,1.76096868026452,0.829312462163088,0.864719720501769,1.13618190083742,0,0,0,0,0,0,0,0,0,0,4.78305348303778,0,0,0.531876233169741,0,0,1.41849132023278,0,0,0,0,0,0,0,0,0,0.199945982364114,0,0,0,0,0,0,0.579125226670317,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,5.21026396419431,3.99001130548962,4.2099014164961,3.45975702990393,5.62877973973374,4.50390979202101,2.96836132889982,0.308419387605311,0.887808626565635,0.0821271560138091,0,0.348631135379878,0,0,0,0,0.182091168006717,0,0,0.0770153371044148,0,0,0,0,0,0,0,0.270946437543853,0,0,0,0,0,0,0,0,0,0,0,0.082509499920588,0,0,1.6068392984416,0.096670718292122,0.462145851343933,0,0,0,0.145016693914229,0,0.0890320356467374,0,0,0,0,0,0.31481234683064,0,0,0,0,0,0,0,0,0,0,0,0,1.56989728039846,0.359744915166629,0,0,0.404364963146632,0,0.421258456238981,0.48763373908959,0,2.11300293513511,0.136499911407986,0,0,0,0,0,0,0,0.202910376962704,0,0,0.143411352204052,0.0982490410131212,0,0,0,0.329294892959902,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.324621940274555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.08182271390393,1.6653598399891,0,0,0.146508179271894,0,0,0,0.23874448473769,0,0,0,0.140669416410513,0,0,0,0,0,0,0,0,0.311039587661807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0,0,0,0.461701551022782,0,0,0,0,0.31900115973192,0.183195186803725,0,0,0,0.997270091400938,0,0.19606253431774,0,0,0.476809736941136,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20990716048664,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.717873024576814,0,0.429226048136571,0,0.134366944973453,3.24269895188163,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0.0607495566580247,0,0,0.209818352539992,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0,0,0,0,0.106787412567695,0.157204305099666,0,0,0,0,0,0,0,0.306345576763462,0,0,0,0.244052529803926,0,0,0,0.124192805882767,0,0,0,0,0,0,0,0.74627401443437,0.701139929541673,0,0,0,0,0.228840068396924,0.302461847526478,1.86524640699337,0.295710299979268,0.159296767163702,0,2.32894435314389,0.414706207840855,2.39257543102195,1.04349012362347,0.450772826991655,0,0,0,0.322231671127465,0.464033759878494,1.99047944349308,0,0.343395705182793,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0,0,0,0,0,0.205116364240755,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0.206686796501184,0.19024743058172,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0.131545547125698,0,0,0,0,0,0.913158720509496,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.971421986118279,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0.169927114687817,0.281951753939561,0.45120521581504,0,0,0,0,0,0,0,0,0.135982980381829,0,0,0.371995018166751,0,0,0,0,0,0,0,0,0,0,0,0,0.103432995861895,0,0,0,0,0,0,0.202117188958219,0,0.684466602170562,0,0.0717222053926763,0.332660356546013,0,0,0,0,0,0.366724332548599,0.406896178315738,0,0,0 | ||
|short_description=p13@SH3PXD2A | |short_description=p13@SH3PXD2A | ||
}} | }} |
Latest revision as of 04:07, 16 September 2015
Short description: | p13@SH3PXD2A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_SH3PXD2A_5end |
Coexpression cluster: | C2033_Preadipocyte_Adipocyte_hepatic_Mesenchymal_Ewing_skeletal_Fibroblast |
Association with transcript: | -26bp_to_uc010qqs.1_5end |
EntrezGene: | SH3PXD2A |
HGNC: | 23664 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
preadipocyte | 7.27e-23 | 12 |
omentum preadipocyte | 3.72e-18 | 3 |
preadipocyte of the breast | 3.93e-18 | 3 |
fibroblast | 3.21e-15 | 76 |
fat cell | 1.56e-12 | 15 |
mesenchymal cell | 1.92e-10 | 354 |
connective tissue cell | 4.10e-10 | 361 |
multi fate stem cell | 3.67e-09 | 427 |
motile cell | 5.93e-09 | 386 |
somatic stem cell | 6.10e-09 | 433 |
stem cell | 1.18e-08 | 441 |
hepatic stellate cell | 1.41e-08 | 3 |
subcutaneous fat cell | 4.23e-08 | 3 |
adipocyte of omentum tissue | 5.07e-08 | 3 |
mesenchymal stem cell of Wharton's jelly | 3.32e-07 | 1 |
perirenal preadipocyte | 4.69e-07 | 1 |
perirenal adipocyte cell | 5.26e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
omentum | 2.79e-23 | 6 |
peritoneum | 2.79e-23 | 6 |
abdominal cavity | 2.79e-23 | 6 |
visceral peritoneum | 2.79e-23 | 6 |
perirenal fat | 2.14e-12 | 2 |
cavity lining | 1.56e-11 | 12 |
serous membrane | 1.56e-11 | 12 |
connective tissue | 1.15e-09 | 371 |
breast | 2.02e-09 | 10 |
chest | 1.44e-08 | 11 |
subcutaneous adipose tissue | 4.23e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
liver cancer | 4.43e-07 | 1 |